RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 RTKN2Q8IZC4 609 aa5.28□□□□□ -1.56
PTPRM-206ENST00000578093 ZIC5Q96T25 663 aa5.28□□□□□ -1.56
PTPRM-206ENST00000578093 MIS18AQ9NYP9 233 aa5.28□□□□□ -1.56
PTPRM-206ENST00000578093 ZNF652Q9Y2D9 606 aa5.28□□□□□ -1.56
PTPRM-206ENST00000578093 TLL2Q9Y6L7 1015 aa5.28□□□□□ -1.56
PTPRM-206ENST00000578093 AKAP11Q9UKA4 1901 aa5.28□□□□□ -1.56
PTPRM-206ENST00000578093 MAGEB6P1A0A0J9YX57 407 aa5.27□□□□□ -1.57
PTPRM-206ENST00000578093 AXIN1O15169 862 aa5.27□□□□□ -1.57
PTPRM-206ENST00000578093 NTSR2O95665 410 aa5.27□□□□□ -1.57
PTPRM-206ENST00000578093 SNRPA1P09661 255 aaKnown RBP5.27□□□□□ -1.57
PTPRM-206ENST00000578093 RGS19P49795 217 aa5.27□□□□□ -1.57
PTPRM-206ENST00000578093 SMCPP49901 116 aaPredicted RBP5.27□□□□□ -1.57
PTPRM-206ENST00000578093 VAC14Q08AM6 782 aa5.27□□□□□ -1.57
PTPRM-206ENST00000578093 SEMA3FQ13275 785 aa5.27□□□□□ -1.57
PTPRM-206ENST00000578093 AOC3Q16853 763 aa5.27□□□□□ -1.57
PTPRM-206ENST00000578093 PLA2G2CQ5R387 149 aa5.27□□□□□ -1.57
PTPRM-206ENST00000578093 TPTE2Q6XPS3 522 aa5.27□□□□□ -1.57
PTPRM-206ENST00000578093 NPM2Q86SE8 214 aaKnown RBP5.27□□□□□ -1.57
PTPRM-206ENST00000578093 LARGE2Q8N3Y3 721 aa5.27□□□□□ -1.57
PTPRM-206ENST00000578093 NGEFQ8N5V2 710 aa5.27□□□□□ -1.57
PTPRM-206ENST00000578093 TRPM4Q8TD43 1214 aa5.27□□□□□ -1.57
PTPRM-206ENST00000578093 GPR101Q96P66 508 aaPredicted RBP5.27□□□□□ -1.57
PTPRM-206ENST00000578093 GLIS2Q9BZE0 524 aaPredicted RBP5.27□□□□□ -1.57
PTPRM-206ENST00000578093 MCOLN1Q9GZU1 580 aa5.27□□□□□ -1.57
PTPRM-206ENST00000578093 SPEF2Q9C093 1822 aa5.27□□□□□ -1.57
PTPRM-206ENST00000578093 ABCC4O15439 1325 aa5.26□□□□□ -1.57
PTPRM-206ENST00000578093 MAP3K15Q6ZN16 1313 aa5.26□□□□□ -1.57
PTPRM-206ENST00000578093 PPIP5K2O43314 1243 aa5.26□□□□□ -1.57
PTPRM-206ENST00000578093 CELF2O95319 508 aaKnown RBP5.26□□□□□ -1.57
PTPRM-206ENST00000578093 FBXO45P0C2W1 286 aa5.26□□□□□ -1.57
PTPRM-206ENST00000578093 MYL6BP14649 208 aa5.26□□□□□ -1.57
PTPRM-206ENST00000578093 VARSP26640 1264 aaKnown RBP5.26□□□□□ -1.57
PTPRM-206ENST00000578093 LMOD1P29536 600 aaPredicted RBP5.26□□□□□ -1.57
PTPRM-206ENST00000578093 ALDH1B1P30837 517 aa5.26□□□□□ -1.57
PTPRM-206ENST00000578093 HOXA10P31260 410 aaPredicted RBP5.26□□□□□ -1.57
PTPRM-206ENST00000578093 HIRAP54198 1017 aaPredicted RBP5.26□□□□□ -1.57
PTPRM-206ENST00000578093 EIF6P56537 245 aaKnown RBP5.26□□□□□ -1.57
PTPRM-206ENST00000578093 SH3BP2P78314 561 aa5.26□□□□□ -1.57
PTPRM-206ENST00000578093 MLLT1Q03111 559 aaPredicted RBP5.26□□□□□ -1.57
PTPRM-206ENST00000578093 SUSD4Q5VX71 490 aa5.26□□□□□ -1.57
PTPRM-206ENST00000578093 LIAT1Q6ZQX7 453 aa5.26□□□□□ -1.57
PTPRM-206ENST00000578093 SH3BP5LQ7L8J4 393 aa5.26□□□□□ -1.57
PTPRM-206ENST00000578093 SAPCD2Q86UD0 394 aa5.26□□□□□ -1.57
PTPRM-206ENST00000578093 FAM174AQ8TBP5 190 aa5.26□□□□□ -1.57
PTPRM-206ENST00000578093 JDP2Q8WYK2 163 aa5.26□□□□□ -1.57
PTPRM-206ENST00000578093 THUMPD2Q9BTF0 503 aaKnown RBP5.26□□□□□ -1.57
PTPRM-206ENST00000578093 GPRC5DQ9NZD1 345 aa5.26□□□□□ -1.57
PTPRM-206ENST00000578093 YDJCA8MPS7 323 aa5.25□□□□□ -1.57
PTPRM-206ENST00000578093 GPR37L1O60883 481 aa5.25□□□□□ -1.57
PTPRM-206ENST00000578093 ANXA1P04083 346 aa5.25□□□□□ -1.57
PTPRM-206ENST00000578093 GTF2E1P29083 439 aaPredicted RBP5.25□□□□□ -1.57
PTPRM-206ENST00000578093 ECE1P42892 770 aa5.25□□□□□ -1.57
PTPRM-206ENST00000578093 GMPSP49915 693 aaPredicted RBP5.25□□□□□ -1.57
PTPRM-206ENST00000578093 CXCL9Q07325 125 aa5.25□□□□□ -1.57
PTPRM-206ENST00000578093 ZNF697Q5TEC3 545 aa5.25□□□□□ -1.57
PTPRM-206ENST00000578093 CIAPIN1Q6FI81 312 aa5.25□□□□□ -1.57
PTPRM-206ENST00000578093 USP50Q70EL3 339 aaPredicted RBP5.25□□□□□ -1.57
PTPRM-206ENST00000578093 LRP10Q7Z4F1 713 aa5.25□□□□□ -1.57
PTPRM-206ENST00000578093 SH3RF1Q7Z6J0 888 aa5.25□□□□□ -1.57
PTPRM-206ENST00000578093 NIM1KQ8IY84 436 aa5.25□□□□□ -1.57
PTPRM-206ENST00000578093 EHBP1Q8NDI1 1231 aa5.25□□□□□ -1.57
PTPRM-206ENST00000578093 RPGRQ92834 1020 aaKnown RBP5.25□□□□□ -1.57
PTPRM-206ENST00000578093 FOXJ1Q92949 421 aa5.25□□□□□ -1.57
PTPRM-206ENST00000578093 ZNF428Q96B54 188 aa5.25□□□□□ -1.57
PTPRM-206ENST00000578093 CALR3Q96L12 384 aaKnown RBP5.25□□□□□ -1.57
PTPRM-206ENST00000578093 ZNF408Q9H9D4 720 aa5.25□□□□□ -1.57
PTPRM-206ENST00000578093 ADARB2Q9NS39 739 aaKnown RBP5.25□□□□□ -1.57
PTPRM-206ENST00000578093 CDV3Q9UKY7 258 aaKnown RBP5.25□□□□□ -1.57
PTPRM-206ENST00000578093 PCDHB9Q9Y5E1 797 aa5.25□□□□□ -1.57
PTPRM-206ENST00000578093 ERVV-1B6SEH8 477 aa5.24□□□□□ -1.57
PTPRM-206ENST00000578093 RAD17O75943 681 aa5.24□□□□□ -1.57
PTPRM-206ENST00000578093 EGFRP00533 1210 aa5.24□□□□□ -1.57
PTPRM-206ENST00000578093 U2AF1L5P0DN76 240 aaPredicted RBP5.24□□□□□ -1.57
PTPRM-206ENST00000578093 PPP2R1AP30153 589 aa5.24□□□□□ -1.57
PTPRM-206ENST00000578093 SOX10P56693 466 aa5.24□□□□□ -1.57
PTPRM-206ENST00000578093 EIF4A1P60842 406 aaKnown RBP5.24□□□□□ -1.57
PTPRM-206ENST00000578093 U2AF1Q01081 240 aaKnown RBP eCLIP5.24□□□□□ -1.57
PTPRM-206ENST00000578093 DGKZQ13574 1117 aa5.24□□□□□ -1.57
PTPRM-206ENST00000578093 PROSER3Q2NL68 480 aa5.24□□□□□ -1.57
PTPRM-206ENST00000578093 HDGFL1Q5TGJ6 251 aa5.24□□□□□ -1.57
PTPRM-206ENST00000578093 CC2D2BQ6DHV5 1058 aa5.24□□□□□ -1.57
PTPRM-206ENST00000578093 KIF6Q6ZMV9 814 aa5.24□□□□□ -1.57
PTPRM-206ENST00000578093 ZNF34Q8IZ26 560 aa5.24□□□□□ -1.57
PTPRM-206ENST00000578093 ADAM32Q8TC27 787 aa5.24□□□□□ -1.57
PTPRM-206ENST00000578093 RTF1Q92541 710 aaKnown RBP5.24□□□□□ -1.57
PTPRM-206ENST00000578093 SLC10A4Q96EP9 437 aa5.24□□□□□ -1.57
PTPRM-206ENST00000578093 TRIM47Q96LD4 638 aa5.24□□□□□ -1.57
PTPRM-206ENST00000578093 CRAMP1Q96RY5 1269 aa5.24□□□□□ -1.57
PTPRM-206ENST00000578093 NYXQ9GZU5 481 aa5.24□□□□□ -1.57
PTPRM-206ENST00000578093 RRP7AQ9Y3A4 280 aaKnown RBP5.24□□□□□ -1.57
PTPRM-206ENST00000578093 POM121CA8CG34 1229 aa5.23□□□□□ -1.57
PTPRM-206ENST00000578093 FAM155AB1AL88 458 aaPredicted RBP5.23□□□□□ -1.57
PTPRM-206ENST00000578093 ADM5C9JUS6 153 aa5.23□□□□□ -1.57
PTPRM-206ENST00000578093 MAP2K2P36507 400 aa5.23□□□□□ -1.57
PTPRM-206ENST00000578093 SKOR1P84550 965 aa5.23□□□□□ -1.57
PTPRM-206ENST00000578093 TAF7Q15545 349 aaPredicted RBP5.23□□□□□ -1.57
PTPRM-206ENST00000578093 CTC1Q2NKJ3 1217 aa5.23□□□□□ -1.57
PTPRM-206ENST00000578093 KRTAP5-3Q6L8H2 238 aa5.23□□□□□ -1.57
PTPRM-206ENST00000578093 IRF7Q92985 503 aa5.23□□□□□ -1.57
PTPRM-206ENST00000578093 GLMNQ92990 594 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms