RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 VCANP13611 3396 aa12.21□□□□□ -0.46
CRLF3-202ENST00000577725 YDJCA8MPS7 323 aa12.2□□□□□ -0.46
CRLF3-202ENST00000577725 IFIT1P09914 478 aaKnown RBP12.2□□□□□ -0.46
CRLF3-202ENST00000577725 COL9A1P20849 921 aa12.2□□□□□ -0.46
CRLF3-202ENST00000577725 KLRK1P26718 216 aa12.2□□□□□ -0.46
CRLF3-202ENST00000577725 PI16Q6UXB8 463 aa12.2□□□□□ -0.46
CRLF3-202ENST00000577725 DPP8Q6V1X1 898 aaPredicted RBP12.2□□□□□ -0.46
CRLF3-202ENST00000577725 NBPF11Q86T75 865 aa12.2□□□□□ -0.46
CRLF3-202ENST00000577725 DEFB123Q8N688 67 aa12.2□□□□□ -0.46
CRLF3-202ENST00000577725 HAUS7Q99871 368 aa12.2□□□□□ -0.46
CRLF3-202ENST00000577725 SPTBN5Q9NRC6 3674 aaKnown RBP12.2□□□□□ -0.46
CRLF3-202ENST00000577725 GOLIM4O00461 696 aa12.19□□□□□ -0.46
CRLF3-202ENST00000577725 RPS12P25398 132 aaKnown RBP12.19□□□□□ -0.46
CRLF3-202ENST00000577725 CHMLP26374 656 aa12.19□□□□□ -0.46
CRLF3-202ENST00000577725 KCNJ4P48050 445 aa12.19□□□□□ -0.46
CRLF3-202ENST00000577725 BCAMP50895 628 aa12.19□□□□□ -0.46
CRLF3-202ENST00000577725 GPSM2P81274 684 aa12.19□□□□□ -0.46
CRLF3-202ENST00000577725 KIF4BQ2VIQ3 1234 aa12.19□□□□□ -0.46
CRLF3-202ENST00000577725 CCDC158Q5M9N0 1113 aa12.19□□□□□ -0.46
CRLF3-202ENST00000577725 CCDC102BQ68D86 513 aa12.19□□□□□ -0.46
CRLF3-202ENST00000577725 EFCC1Q9HA90 598 aa12.19□□□□□ -0.46
CRLF3-202ENST00000577725 LRRC37AA6NMS7 1700 aa12.18□□□□□ -0.46
CRLF3-202ENST00000577725 UBE2Q2LH0YL09 131 aa12.18□□□□□ -0.46
CRLF3-202ENST00000577725 CHGBP05060 677 aa12.18□□□□□ -0.46
CRLF3-202ENST00000577725 MCAMP43121 646 aa12.18□□□□□ -0.46
CRLF3-202ENST00000577725 ZAP70P43403 619 aa12.18□□□□□ -0.46
CRLF3-202ENST00000577725 GYG1P46976 350 aa12.18□□□□□ -0.46
CRLF3-202ENST00000577725 MKRN3Q13064 507 aaKnown RBP12.18□□□□□ -0.46
CRLF3-202ENST00000577725 SLC9C1Q4G0N8 1177 aa12.18□□□□□ -0.46
CRLF3-202ENST00000577725 MOB2Q70IA6 237 aa12.18□□□□□ -0.46
CRLF3-202ENST00000577725 EVI5LQ96CN4 794 aa12.18□□□□□ -0.46
CRLF3-202ENST00000577725 FSD1Q9BTV5 496 aa12.18□□□□□ -0.46
CRLF3-202ENST00000577725 ANKRD2Q9GZV1 360 aa12.18□□□□□ -0.46
CRLF3-202ENST00000577725 ANTXR1Q9H6X2 564 aa12.18□□□□□ -0.46
CRLF3-202ENST00000577725 ANKIB1Q9P2G1 1089 aa12.18□□□□□ -0.46
CRLF3-202ENST00000577725 IQSEC3Q9UPP2 1182 aaPredicted RBP12.18□□□□□ -0.46
CRLF3-202ENST00000577725 CEP290O15078 2479 aa12.17□□□□□ -0.46
CRLF3-202ENST00000577725 MYO5AQ9Y4I1 1855 aaKnown RBP12.17□□□□□ -0.46
CRLF3-202ENST00000577725 PSMD14O00487 310 aa12.17□□□□□ -0.46
CRLF3-202ENST00000577725 VASPP50552 380 aaPredicted RBP12.17□□□□□ -0.46
CRLF3-202ENST00000577725 UBE4AQ14139 1066 aa12.17□□□□□ -0.46
CRLF3-202ENST00000577725 SLFNL1Q499Z3 407 aa12.17□□□□□ -0.46
CRLF3-202ENST00000577725 CD99L2Q8TCZ2 262 aa12.17□□□□□ -0.46
CRLF3-202ENST00000577725 ESYT1Q9BSJ8 1104 aa12.17□□□□□ -0.46
CRLF3-202ENST00000577725 IL25Q9H293 177 aa12.17□□□□□ -0.46
CRLF3-202ENST00000577725 PAG1Q9NWQ8 432 aa12.17□□□□□ -0.46
CRLF3-202ENST00000577725 NR2E3Q9Y5X4 410 aa12.17□□□□□ -0.46
CRLF3-202ENST00000577725 KIAA0100Q14667 2235 aaKnown RBP12.17□□□□□ -0.46
CRLF3-202ENST00000577725 ZNF804BA4D1E1 1349 aa12.16□□□□□ -0.46
CRLF3-202ENST00000577725 BBOX1O75936 387 aa12.16□□□□□ -0.46
CRLF3-202ENST00000577725 NMIQ13287 307 aaPredicted RBP12.16□□□□□ -0.46
CRLF3-202ENST00000577725 CASC1Q6TDU7 716 aa12.16□□□□□ -0.46
CRLF3-202ENST00000577725 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.16□□□□□ -0.46
CRLF3-202ENST00000577725 HTATIP2Q9BUP3 242 aa12.16□□□□□ -0.46
CRLF3-202ENST00000577725 DIAPH3Q9NSV4 1193 aa12.16□□□□□ -0.46
CRLF3-202ENST00000577725 ASTN2O75129 1339 aaPredicted RBP12.15□□□□□ -0.46
CRLF3-202ENST00000577725 XDHP47989 1333 aa12.15□□□□□ -0.46
CRLF3-202ENST00000577725 UFL1O94874 794 aa12.15□□□□□ -0.46
CRLF3-202ENST00000577725 UQCRFS1P1P0C7P4 283 aa12.15□□□□□ -0.46
CRLF3-202ENST00000577725 ARID4AP29374 1257 aaPredicted RBP12.15□□□□□ -0.46
CRLF3-202ENST00000577725 PLA2G5P39877 138 aa12.15□□□□□ -0.46
CRLF3-202ENST00000577725 INHBEP58166 350 aa12.15□□□□□ -0.46
CRLF3-202ENST00000577725 RASGRF1Q13972 1273 aa12.15□□□□□ -0.46
CRLF3-202ENST00000577725 ANGEL2Q5VTE6 544 aaKnown RBP12.15□□□□□ -0.46
CRLF3-202ENST00000577725 CWC27Q6UX04 472 aaKnown RBP12.15□□□□□ -0.46
CRLF3-202ENST00000577725 Q7L0L9 218 aa12.15□□□□□ -0.46
CRLF3-202ENST00000577725 TXNRD3Q86VQ6 643 aa12.15□□□□□ -0.46
CRLF3-202ENST00000577725 FAM84BQ96KN1 310 aaPredicted RBP12.15□□□□□ -0.46
CRLF3-202ENST00000577725 FAM227BQ96M60 508 aa12.15□□□□□ -0.46
CRLF3-202ENST00000577725 PIH1D3Q9NQM4 214 aaKnown RBP12.15□□□□□ -0.46
CRLF3-202ENST00000577725 MTMR10Q9NXD2 777 aa12.15□□□□□ -0.46
CRLF3-202ENST00000577725 HMG20BQ9P0W2 317 aa12.15□□□□□ -0.46
CRLF3-202ENST00000577725 NSFL1CQ9UNZ2 370 aaKnown RBP12.15□□□□□ -0.46
CRLF3-202ENST00000577725 COL1A1P02452 1464 aaPredicted RBP12.14□□□□□ -0.47
CRLF3-202ENST00000577725 IRS2Q9Y4H2 1338 aa12.14□□□□□ -0.47
CRLF3-202ENST00000577725 MYH7P12883 1935 aa12.14□□□□□ -0.47
CRLF3-202ENST00000577725 MYH13Q9UKX3 1938 aa12.14□□□□□ -0.47
CRLF3-202ENST00000577725 A0A0D9SFI3 127 aa12.14□□□□□ -0.47
CRLF3-202ENST00000577725 TTLL12Q14166 644 aaPredicted RBP12.14□□□□□ -0.47
CRLF3-202ENST00000577725 IFNL1Q8IU54 200 aa12.14□□□□□ -0.47
CRLF3-202ENST00000577725 SP8Q8IXZ3 490 aa12.14□□□□□ -0.47
CRLF3-202ENST00000577725 GGA1Q9UJY5 639 aa12.14□□□□□ -0.47
CRLF3-202ENST00000577725 C6orf229H3BNL8 230 aa12.13□□□□□ -0.47
CRLF3-202ENST00000577725 CYP2E1P05181 493 aaPredicted RBP12.13□□□□□ -0.47
CRLF3-202ENST00000577725 ATP2B4P23634 1241 aa12.13□□□□□ -0.47
CRLF3-202ENST00000577725 FBXO33Q7Z6M2 555 aa12.13□□□□□ -0.47
CRLF3-202ENST00000577725 VPS37DQ86XT2 251 aa12.13□□□□□ -0.47
CRLF3-202ENST00000577725 KBTBD3Q8NAB2 608 aa12.13□□□□□ -0.47
CRLF3-202ENST00000577725 SPATA5Q8NB90 893 aa12.13□□□□□ -0.47
CRLF3-202ENST00000577725 FAM122AQ96E09 287 aa12.13□□□□□ -0.47
CRLF3-202ENST00000577725 ZNF512BQ96KM6 892 aaPredicted RBP12.13□□□□□ -0.47
CRLF3-202ENST00000577725 UPF2Q9HAU5 1272 aaKnown RBP12.13□□□□□ -0.47
CRLF3-202ENST00000577725 DAXXQ9UER7 740 aaPredicted RBP12.13□□□□□ -0.47
CRLF3-202ENST00000577725 POLLQ9UGP5 575 aa12.13□□□□□ -0.47
CRLF3-202ENST00000577725 JAG2Q9Y219 1238 aa12.13□□□□□ -0.47
CRLF3-202ENST00000577725 LEMD3Q9Y2U8 911 aa12.13□□□□□ -0.47
CRLF3-202ENST00000577725 DUOX1Q9NRD9 1551 aa12.13□□□□□ -0.47
CRLF3-202ENST00000577725 MANSC4A6NHS7 340 aaPredicted RBP12.12□□□□□ -0.47
CRLF3-202ENST00000577725 SGSM2O43147 1006 aa12.12□□□□□ -0.47
CRLF3-202ENST00000577725 MYCP01106 439 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms