RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 RILPL2Q969X0 211 aa16.91■□□□□ 0.3
RPAIN-217ENST00000575711 TDRD3Q9H7E2 651 aaKnown RBP16.91■□□□□ 0.3
RPAIN-217ENST00000575711 TMOD2Q9NZR1 351 aa16.91■□□□□ 0.3
RPAIN-217ENST00000575711 ASTN2O75129 1339 aaPredicted RBP16.91■□□□□ 0.3
RPAIN-217ENST00000575711 PITPNM2Q9BZ72 1349 aa16.91■□□□□ 0.3
RPAIN-217ENST00000575711 ZNF532Q9HCE3 1301 aa16.91■□□□□ 0.3
RPAIN-217ENST00000575711 ADAMTSL1Q8N6G6 1762 aa16.9■□□□□ 0.3
RPAIN-217ENST00000575711 ZFYP08048 801 aaPredicted RBP16.9■□□□□ 0.3
RPAIN-217ENST00000575711 RGS3P49796 1198 aa16.9■□□□□ 0.3
RPAIN-217ENST00000575711 SPDYE2Q495Y8 402 aa16.9■□□□□ 0.3
RPAIN-217ENST00000575711 SKAP1Q86WV1 359 aa16.9■□□□□ 0.3
RPAIN-217ENST00000575711 APOBEC3FQ8IUX4 373 aaKnown RBP16.9■□□□□ 0.3
RPAIN-217ENST00000575711 RBM46Q8TBY0 533 aaKnown RBP16.9■□□□□ 0.3
RPAIN-217ENST00000575711 VEZTQ9HBM0 779 aa16.9■□□□□ 0.3
RPAIN-217ENST00000575711 ZNF70Q9UC06 446 aaPredicted RBP16.9■□□□□ 0.3
RPAIN-217ENST00000575711 TCRBV5S4A2TA0A5A2 114 aa16.89■□□□□ 0.29
RPAIN-217ENST00000575711 UBE3CQ15386 1083 aa16.89■□□□□ 0.29
RPAIN-217ENST00000575711 MAP1SQ66K74 1059 aaPredicted RBP16.89■□□□□ 0.29
RPAIN-217ENST00000575711 CDC42EP5Q6NZY7 148 aa16.89■□□□□ 0.29
RPAIN-217ENST00000575711 ADGRA1Q86SQ6 560 aa16.89■□□□□ 0.29
RPAIN-217ENST00000575711 SULF1Q8IWU6 871 aa16.89■□□□□ 0.29
RPAIN-217ENST00000575711 USP40Q9NVE5 1235 aa16.89■□□□□ 0.29
RPAIN-217ENST00000575711 AATFQ9NY61 560 aaKnown RBP eCLIP16.89■□□□□ 0.29
RPAIN-217ENST00000575711 RNF113AO15541 343 aaKnown RBP16.88■□□□□ 0.29
RPAIN-217ENST00000575711 GSPT1P15170 499 aaKnown RBP16.88■□□□□ 0.29
RPAIN-217ENST00000575711 PLCG2P16885 1265 aa16.88■□□□□ 0.29
RPAIN-217ENST00000575711 PPP4CP60510 307 aa16.88■□□□□ 0.29
RPAIN-217ENST00000575711 TNFAIP1Q13829 316 aa16.88■□□□□ 0.29
RPAIN-217ENST00000575711 CDC37L1Q7L3B6 337 aa16.88■□□□□ 0.29
RPAIN-217ENST00000575711 KRT26Q7Z3Y9 468 aa16.88■□□□□ 0.29
RPAIN-217ENST00000575711 TICAM2Q86XR7 235 aa16.88■□□□□ 0.29
RPAIN-217ENST00000575711 CERS3Q8IU89 383 aa16.88■□□□□ 0.29
RPAIN-217ENST00000575711 GTF3C3Q9Y5Q9 886 aa16.88■□□□□ 0.29
RPAIN-217ENST00000575711 MYH2Q9UKX2 1941 aa16.88■□□□□ 0.29
RPAIN-217ENST00000575711 MAGEB6P1A0A0J9YX57 407 aa16.87■□□□□ 0.29
RPAIN-217ENST00000575711 TNNI2P48788 182 aa16.87■□□□□ 0.29
RPAIN-217ENST00000575711 FSTL1Q12841 308 aa16.87■□□□□ 0.29
RPAIN-217ENST00000575711 MIGA1Q8NAN2 632 aa16.87■□□□□ 0.29
RPAIN-217ENST00000575711 APPBP2Q92624 585 aa16.87■□□□□ 0.29
RPAIN-217ENST00000575711 RFX7Q2KHR2 1363 aa16.87■□□□□ 0.29
RPAIN-217ENST00000575711 MYO5AQ9Y4I1 1855 aaKnown RBP16.86■□□□□ 0.29
RPAIN-217ENST00000575711 TCP10L2B9ZVM9 353 aa16.86■□□□□ 0.29
RPAIN-217ENST00000575711 CHGBP05060 677 aa16.86■□□□□ 0.29
RPAIN-217ENST00000575711 CACNB3P54284 484 aa16.86■□□□□ 0.29
RPAIN-217ENST00000575711 RHBDL3P58872 404 aa16.86■□□□□ 0.29
RPAIN-217ENST00000575711 SLFNL1Q499Z3 407 aa16.86■□□□□ 0.29
RPAIN-217ENST00000575711 FKBP1CQ5VVH2 108 aa16.86■□□□□ 0.29
RPAIN-217ENST00000575711 USP48Q86UV5 1035 aa16.86■□□□□ 0.29
RPAIN-217ENST00000575711 ADM5C9JUS6 153 aa16.85■□□□□ 0.29
RPAIN-217ENST00000575711 SDSP20132 328 aa16.85■□□□□ 0.29
RPAIN-217ENST00000575711 DYNLL1P63167 89 aaKnown RBP16.85■□□□□ 0.29
RPAIN-217ENST00000575711 TEX11Q8IYF3 940 aa16.85■□□□□ 0.29
RPAIN-217ENST00000575711 SH3RF3Q8TEJ3 882 aaPredicted RBP16.85■□□□□ 0.29
RPAIN-217ENST00000575711 RIOK1Q9BRS2 568 aaKnown RBP16.85■□□□□ 0.29
RPAIN-217ENST00000575711 GLIS2Q9BZE0 524 aaPredicted RBP16.85■□□□□ 0.29
RPAIN-217ENST00000575711 DEFB129Q9H1M3 183 aa16.85■□□□□ 0.29
RPAIN-217ENST00000575711 SCAF8Q9UPN6 1271 aaKnown RBP16.85■□□□□ 0.29
RPAIN-217ENST00000575711 PPP2R3BQ9Y5P8 575 aa16.85■□□□□ 0.29
RPAIN-217ENST00000575711 HIP1O00291 1037 aa16.84■□□□□ 0.29
RPAIN-217ENST00000575711 WDHD1O75717 1129 aaPredicted RBP16.84■□□□□ 0.29
RPAIN-217ENST00000575711 FAM83AQ86UY5 434 aa16.84■□□□□ 0.29
RPAIN-217ENST00000575711 AIDAQ96BJ3 306 aa16.84■□□□□ 0.29
RPAIN-217ENST00000575711 IDI2Q9BXS1 227 aa16.84■□□□□ 0.29
RPAIN-217ENST00000575711 PUS7LQ9H0K6 701 aaKnown RBP16.84■□□□□ 0.29
RPAIN-217ENST00000575711 ECM29Q5VYK3 1845 aa16.84■□□□□ 0.29
RPAIN-217ENST00000575711 MBD4O95243 580 aa16.83■□□□□ 0.28
RPAIN-217ENST00000575711 NFIAQ12857 509 aa16.83■□□□□ 0.28
RPAIN-217ENST00000575711 PICALMQ13492 652 aa16.83■□□□□ 0.28
RPAIN-217ENST00000575711 RASA3Q14644 834 aa16.83■□□□□ 0.28
RPAIN-217ENST00000575711 BMP2KLQ5H9B9 411 aa16.83■□□□□ 0.28
RPAIN-217ENST00000575711 ZMYM1Q5SVZ6 1142 aa16.83■□□□□ 0.28
RPAIN-217ENST00000575711 LCORLQ8N3X6 602 aa16.83■□□□□ 0.28
RPAIN-217ENST00000575711 OSBP2Q969R2 916 aa16.83■□□□□ 0.28
RPAIN-217ENST00000575711 CRNKL1Q9BZJ0 848 aaKnown RBP16.83■□□□□ 0.28
RPAIN-217ENST00000575711 DIAPH3Q9NSV4 1193 aa16.83■□□□□ 0.28
RPAIN-217ENST00000575711 MYH7P12883 1935 aa16.82■□□□□ 0.28
RPAIN-217ENST00000575711 TRAF5O00463 557 aa16.82■□□□□ 0.28
RPAIN-217ENST00000575711 ENTPD3O75355 529 aa16.82■□□□□ 0.28
RPAIN-217ENST00000575711 ITGBL1O95965 494 aaPredicted RBP16.82■□□□□ 0.28
RPAIN-217ENST00000575711 USP5P45974 858 aa16.82■□□□□ 0.28
RPAIN-217ENST00000575711 TCP10Q12799 353 aa16.82■□□□□ 0.28
RPAIN-217ENST00000575711 TGFBRAP1Q8WUH2 860 aa16.82■□□□□ 0.28
RPAIN-217ENST00000575711 FAM151AQ8WW52 585 aa16.82■□□□□ 0.28
RPAIN-217ENST00000575711 ARMT1Q9H993 441 aa16.82■□□□□ 0.28
RPAIN-217ENST00000575711 FAM198AQ9UFP1 575 aa16.82■□□□□ 0.28
RPAIN-217ENST00000575711 CNTNAP1P78357 1384 aa16.81■□□□□ 0.28
RPAIN-217ENST00000575711 NPM3O75607 178 aaKnown RBP16.81■□□□□ 0.28
RPAIN-217ENST00000575711 CDCA5Q96FF9 252 aa16.81■□□□□ 0.28
RPAIN-217ENST00000575711 TMEM39BQ9GZU3 492 aa16.81■□□□□ 0.28
RPAIN-217ENST00000575711 DDX4Q9NQI0 724 aaKnown RBP16.81■□□□□ 0.28
RPAIN-217ENST00000575711 HELLSQ9NRZ9 838 aa16.81■□□□□ 0.28
RPAIN-217ENST00000575711 FLT1P17948 1338 aa16.8■□□□□ 0.28
RPAIN-217ENST00000575711 PASKQ96RG2 1323 aa16.8■□□□□ 0.28
RPAIN-217ENST00000575711 M0R2C6 588 aa16.8■□□□□ 0.28
RPAIN-217ENST00000575711 GPAA1O43292 621 aa16.8■□□□□ 0.28
RPAIN-217ENST00000575711 NMIQ13287 307 aaPredicted RBP16.8■□□□□ 0.28
RPAIN-217ENST00000575711 PRAMEF18Q5VWM3 479 aa16.8■□□□□ 0.28
RPAIN-217ENST00000575711 DLK2Q6UY11 383 aa16.8■□□□□ 0.28
RPAIN-217ENST00000575711 MAPKAPK5Q8IW41 473 aa16.8■□□□□ 0.28
RPAIN-217ENST00000575711 FAM227BQ96M60 508 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms