RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 SLF2Q8IX21 1173 aa7.95□□□□□ -1.14
SMG6-217ENST00000575338 ESR2Q92731 530 aa7.95□□□□□ -1.14
SMG6-217ENST00000575338 CELF1Q92879 486 aaKnown RBP7.95□□□□□ -1.14
SMG6-217ENST00000575338 CRNKL1Q9BZJ0 848 aaKnown RBP7.95□□□□□ -1.14
SMG6-217ENST00000575338 TMX4Q9H1E5 349 aaPredicted RBP7.95□□□□□ -1.14
SMG6-217ENST00000575338 ATP8A2Q9NTI2 1148 aa7.95□□□□□ -1.14
SMG6-217ENST00000575338 TMEM63CQ9P1W3 806 aa7.95□□□□□ -1.14
SMG6-217ENST00000575338 ABCF2Q9UG63 623 aa7.95□□□□□ -1.14
SMG6-217ENST00000575338 ANAPC4Q9UJX5 808 aa7.95□□□□□ -1.14
SMG6-217ENST00000575338 TAF6LQ9Y6J9 622 aa7.95□□□□□ -1.14
SMG6-217ENST00000575338 NAV1Q8NEY1 1877 aa7.95□□□□□ -1.14
SMG6-217ENST00000575338 STK36Q9NRP7 1315 aa7.95□□□□□ -1.14
SMG6-217ENST00000575338 SALL1Q9NSC2 1324 aa7.95□□□□□ -1.14
SMG6-217ENST00000575338 MYH2Q9UKX2 1941 aa7.95□□□□□ -1.14
SMG6-217ENST00000575338 NID2Q14112 1375 aa7.95□□□□□ -1.14
SMG6-217ENST00000575338 LRRC37AA6NMS7 1700 aa7.95□□□□□ -1.14
SMG6-217ENST00000575338 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.94□□□□□ -1.14
SMG6-217ENST00000575338 SYCE3A1L190 88 aa7.94□□□□□ -1.14
SMG6-217ENST00000575338 SH2B2O14492 632 aaPredicted RBP7.94□□□□□ -1.14
SMG6-217ENST00000575338 IFIT3O14879 490 aaKnown RBP7.94□□□□□ -1.14
SMG6-217ENST00000575338 CTAGE5O15320 804 aa7.94□□□□□ -1.14
SMG6-217ENST00000575338 BBOX1O75936 387 aa7.94□□□□□ -1.14
SMG6-217ENST00000575338 BAG3O95817 575 aa7.94□□□□□ -1.14
SMG6-217ENST00000575338 CHGBP05060 677 aa7.94□□□□□ -1.14
SMG6-217ENST00000575338 CALM1P0DP23 149 aa7.94□□□□□ -1.14
SMG6-217ENST00000575338 CALM2P0DP24 149 aa7.94□□□□□ -1.14
SMG6-217ENST00000575338 CALM3P0DP25 149 aa7.94□□□□□ -1.14
SMG6-217ENST00000575338 XBP1P17861 261 aa7.94□□□□□ -1.14
SMG6-217ENST00000575338 ATP2B4P23634 1241 aa7.94□□□□□ -1.14
SMG6-217ENST00000575338 CCT2P78371 535 aaKnown RBP7.94□□□□□ -1.14
SMG6-217ENST00000575338 HS1BP3Q53T59 392 aa7.94□□□□□ -1.14
SMG6-217ENST00000575338 CCDC178Q5BJE1 867 aa7.94□□□□□ -1.14
SMG6-217ENST00000575338 TMEM67Q5HYA8 995 aa7.94□□□□□ -1.14
SMG6-217ENST00000575338 C15orf52Q6ZUT6 534 aaKnown RBP7.94□□□□□ -1.14
SMG6-217ENST00000575338 IQCA1Q86XH1 822 aa7.94□□□□□ -1.14
SMG6-217ENST00000575338 TRIM22Q8IYM9 498 aa7.94□□□□□ -1.14
SMG6-217ENST00000575338 C8orf76Q96K31 380 aa7.94□□□□□ -1.14
SMG6-217ENST00000575338 FAM84BQ96KN1 310 aaPredicted RBP7.94□□□□□ -1.14
SMG6-217ENST00000575338 UBAC1Q9BSL1 405 aa7.94□□□□□ -1.14
SMG6-217ENST00000575338 LRRC2Q9BYS8 371 aa7.94□□□□□ -1.14
SMG6-217ENST00000575338 ARMT1Q9H993 441 aa7.94□□□□□ -1.14
SMG6-217ENST00000575338 ZNF287Q9HBT7 754 aa7.94□□□□□ -1.14
SMG6-217ENST00000575338 ANKIB1Q9P2G1 1089 aa7.94□□□□□ -1.14
SMG6-217ENST00000575338 ARPP21Q9UBL0 812 aaPredicted RBP7.94□□□□□ -1.14
SMG6-217ENST00000575338 SRP68Q9UHB9 627 aaKnown RBP7.94□□□□□ -1.14
SMG6-217ENST00000575338 SLC12A7Q9Y666 1083 aa7.94□□□□□ -1.14
SMG6-217ENST00000575338 NRXN2Q9P2S2 1712 aa7.94□□□□□ -1.14
SMG6-217ENST00000575338 GOLGA8AA7E2F4 631 aa7.93□□□□□ -1.14
SMG6-217ENST00000575338 GSG1L2A8MUP6 293 aa7.93□□□□□ -1.14
SMG6-217ENST00000575338 B4E1Z4 1266 aa7.93□□□□□ -1.14
SMG6-217ENST00000575338 FOXP2O15409 715 aa7.93□□□□□ -1.14
SMG6-217ENST00000575338 JAK2O60674 1132 aa7.93□□□□□ -1.14
SMG6-217ENST00000575338 CCDC192P0DO97 292 aa7.93□□□□□ -1.14
SMG6-217ENST00000575338 GYG1P46976 350 aa7.93□□□□□ -1.14
SMG6-217ENST00000575338 RBM6P78332 1123 aaKnown RBP7.93□□□□□ -1.14
SMG6-217ENST00000575338 PPARAQ07869 468 aa7.93□□□□□ -1.14
SMG6-217ENST00000575338 RESTQ13127 1097 aa7.93□□□□□ -1.14
SMG6-217ENST00000575338 GNL2Q13823 731 aaKnown RBP7.93□□□□□ -1.14
SMG6-217ENST00000575338 NFIXQ14938 502 aa7.93□□□□□ -1.14
SMG6-217ENST00000575338 WTAPQ15007 396 aa7.93□□□□□ -1.14
SMG6-217ENST00000575338 SAFBQ15424 915 aaKnown RBP eCLIP7.93□□□□□ -1.14
SMG6-217ENST00000575338 FOXD4L6Q3SYB3 417 aaPredicted RBP7.93□□□□□ -1.14
SMG6-217ENST00000575338 SLFNL1Q499Z3 407 aa7.93□□□□□ -1.14
SMG6-217ENST00000575338 APOA5Q6Q788 366 aa7.93□□□□□ -1.14
SMG6-217ENST00000575338 FOXD4L3Q6VB84 417 aaPredicted RBP7.93□□□□□ -1.14
SMG6-217ENST00000575338 DZIP1Q86YF9 867 aaKnown RBP7.93□□□□□ -1.14
SMG6-217ENST00000575338 FAM43AQ8N2R8 423 aa7.93□□□□□ -1.14
SMG6-217ENST00000575338 JMYQ8N9B5 988 aa7.93□□□□□ -1.14
SMG6-217ENST00000575338 BICD2Q8TD16 824 aa7.93□□□□□ -1.14
SMG6-217ENST00000575338 KCNG4Q8TDN1 519 aa7.93□□□□□ -1.14
SMG6-217ENST00000575338 TBC1D22AQ8WUA7 517 aa7.93□□□□□ -1.14
SMG6-217ENST00000575338 DDX11Q96FC9 970 aa7.93□□□□□ -1.14
SMG6-217ENST00000575338 GDPD2Q9HCC8 539 aa7.93□□□□□ -1.14
SMG6-217ENST00000575338 TOMM22Q9NS69 142 aa7.93□□□□□ -1.14
SMG6-217ENST00000575338 ORC3Q9UBD5 711 aaPredicted RBP7.93□□□□□ -1.14
SMG6-217ENST00000575338 QSER1Q2KHR3 1735 aa7.92□□□□□ -1.14
SMG6-217ENST00000575338 FOCADQ5VW36 1801 aa7.92□□□□□ -1.14
SMG6-217ENST00000575338 MYH8P13535 1937 aa7.92□□□□□ -1.14
SMG6-217ENST00000575338 PLSCR1O15162 318 aa7.92□□□□□ -1.14
SMG6-217ENST00000575338 YEATS4O95619 227 aa7.92□□□□□ -1.14
SMG6-217ENST00000575338 SERPINB2P05120 415 aa7.92□□□□□ -1.14
SMG6-217ENST00000575338 LDHBP07195 334 aaKnown RBP7.92□□□□□ -1.14
SMG6-217ENST00000575338 PLCG2P16885 1265 aa7.92□□□□□ -1.14
SMG6-217ENST00000575338 IARSP41252 1262 aaKnown RBP7.92□□□□□ -1.14
SMG6-217ENST00000575338 ANTXR2P58335 489 aa7.92□□□□□ -1.14
SMG6-217ENST00000575338 AKAP17AQ02040 695 aaKnown RBP7.92□□□□□ -1.14
SMG6-217ENST00000575338 PDE4BQ07343 736 aa7.92□□□□□ -1.14
SMG6-217ENST00000575338 SSRP1Q08945 709 aaKnown RBP7.92□□□□□ -1.14
SMG6-217ENST00000575338 SF3A1Q15459 793 aaKnown RBP7.92□□□□□ -1.14
SMG6-217ENST00000575338 MAP3K11Q16584 847 aa7.92□□□□□ -1.14
SMG6-217ENST00000575338 CRY2Q49AN0 593 aa7.92□□□□□ -1.14
SMG6-217ENST00000575338 CCDC73Q6ZRK6 1079 aa7.92□□□□□ -1.14
SMG6-217ENST00000575338 CHST3Q7LGC8 479 aa7.92□□□□□ -1.14
SMG6-217ENST00000575338 TTC6Q86TZ1 520 aa7.92□□□□□ -1.14
SMG6-217ENST00000575338 FERMT3Q86UX7 667 aa7.92□□□□□ -1.14
SMG6-217ENST00000575338 TBC1D10CQ8IV04 446 aa7.92□□□□□ -1.14
SMG6-217ENST00000575338 NLGN1Q8N2Q7 840 aa7.92□□□□□ -1.14
SMG6-217ENST00000575338 LCORLQ8N3X6 602 aa7.92□□□□□ -1.14
SMG6-217ENST00000575338 FBXO18Q8NFZ0 1043 aa7.92□□□□□ -1.14
SMG6-217ENST00000575338 LEO1Q8WVC0 666 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms