RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 NLRP12P59046 1061 aa10.38□□□□□ -0.75
NCBP3-204ENST00000574911 ARID5BQ14865 1188 aa10.38□□□□□ -0.75
NCBP3-204ENST00000574911 NTRK3Q16288 839 aa10.38□□□□□ -0.75
NCBP3-204ENST00000574911 SGMS1Q86VZ5 419 aa10.38□□□□□ -0.75
NCBP3-204ENST00000574911 AIFM3Q96NN9 605 aa10.38□□□□□ -0.75
NCBP3-204ENST00000574911 LY9Q9HBG7 655 aa10.38□□□□□ -0.75
NCBP3-204ENST00000574911 FAM177BA6PVY3 158 aa10.38□□□□□ -0.75
NCBP3-204ENST00000574911 SMTNL1A8MU46 457 aa10.38□□□□□ -0.75
NCBP3-204ENST00000574911 PATL2C9JE40 543 aaKnown RBP10.38□□□□□ -0.75
NCBP3-204ENST00000574911 TNNT1P13805 278 aa10.38□□□□□ -0.75
NCBP3-204ENST00000574911 PFKFB1P16118 471 aa10.38□□□□□ -0.75
NCBP3-204ENST00000574911 DPCR1Q3MIW9 517 aa10.38□□□□□ -0.75
NCBP3-204ENST00000574911 KRT40Q6A162 431 aa10.38□□□□□ -0.75
NCBP3-204ENST00000574911 SPATA5Q8NB90 893 aa10.38□□□□□ -0.75
NCBP3-204ENST00000574911 TIGD1Q96MW7 591 aa10.38□□□□□ -0.75
NCBP3-204ENST00000574911 FAM217BQ9NTX9 383 aaPredicted RBP10.38□□□□□ -0.75
NCBP3-204ENST00000574911 MYO5AQ9Y4I1 1855 aaKnown RBP10.38□□□□□ -0.75
NCBP3-204ENST00000574911 TIAM2Q8IVF5 1701 aa10.38□□□□□ -0.75
NCBP3-204ENST00000574911 PLCH1Q4KWH8 1693 aa10.37□□□□□ -0.75
NCBP3-204ENST00000574911 MROH7-TTC4A0A0A0MT08 1334 aa10.37□□□□□ -0.75
NCBP3-204ENST00000574911 FAM237AA0A1B0GTK4 181 aa10.37□□□□□ -0.75
NCBP3-204ENST00000574911 ZBTB43O43298 467 aa10.37□□□□□ -0.75
NCBP3-204ENST00000574911 PPP6R2O75170 966 aa10.37□□□□□ -0.75
NCBP3-204ENST00000574911 SLC3A2P08195 630 aaKnown RBP10.37□□□□□ -0.75
NCBP3-204ENST00000574911 CCZ1BP86790 482 aa10.37□□□□□ -0.75
NCBP3-204ENST00000574911 CCZ1P86791 482 aaPredicted RBP10.37□□□□□ -0.75
NCBP3-204ENST00000574911 PTPAQ15257 358 aa10.37□□□□□ -0.75
NCBP3-204ENST00000574911 TPD52L1Q16890 204 aaPredicted RBP10.37□□□□□ -0.75
NCBP3-204ENST00000574911 CPLX2Q6PUV4 134 aaKnown RBP10.37□□□□□ -0.75
NCBP3-204ENST00000574911 NBPF11Q86T75 865 aa10.37□□□□□ -0.75
NCBP3-204ENST00000574911 VPS37DQ86XT2 251 aa10.37□□□□□ -0.75
NCBP3-204ENST00000574911 HOMEZQ8IX15 550 aa10.37□□□□□ -0.75
NCBP3-204ENST00000574911 IFNL3Q8IZI9 196 aa10.37□□□□□ -0.75
NCBP3-204ENST00000574911 ANKRD7Q92527 254 aa10.37□□□□□ -0.75
NCBP3-204ENST00000574911 AIDAQ96BJ3 306 aa10.37□□□□□ -0.75
NCBP3-204ENST00000574911 C16orf45Q96MC5 204 aaPredicted RBP10.37□□□□□ -0.75
NCBP3-204ENST00000574911 EPB41L4AQ9HCS5 686 aaPredicted RBP10.37□□□□□ -0.75
NCBP3-204ENST00000574911 HPSEQ9Y251 543 aa10.37□□□□□ -0.75
NCBP3-204ENST00000574911 COL14A1Q05707 1796 aaKnown RBP10.37□□□□□ -0.75
NCBP3-204ENST00000574911 ECM29Q5VYK3 1845 aa10.37□□□□□ -0.75
NCBP3-204ENST00000574911 DOCK2Q92608 1830 aa10.37□□□□□ -0.75
NCBP3-204ENST00000574911 CCDC69A6NI79 296 aa10.37□□□□□ -0.75
NCBP3-204ENST00000574911 SLC5A1P13866 664 aa10.37□□□□□ -0.75
NCBP3-204ENST00000574911 RXRAP19793 462 aa10.37□□□□□ -0.75
NCBP3-204ENST00000574911 LIFRP42702 1097 aa10.37□□□□□ -0.75
NCBP3-204ENST00000574911 HELBQ8NG08 1087 aaPredicted RBP10.37□□□□□ -0.75
NCBP3-204ENST00000574911 MAP3K14Q99558 947 aa10.37□□□□□ -0.75
NCBP3-204ENST00000574911 CCDC94Q9BW85 323 aaPredicted RBP10.37□□□□□ -0.75
NCBP3-204ENST00000574911 OSBPL5Q9H0X9 879 aaPredicted RBP10.37□□□□□ -0.75
NCBP3-204ENST00000574911 KCND1Q9NSA2 647 aa10.37□□□□□ -0.75
NCBP3-204ENST00000574911 PAXBP1Q9Y5B6 917 aa10.37□□□□□ -0.75
NCBP3-204ENST00000574911 TACC3Q9Y6A5 838 aa10.37□□□□□ -0.75
NCBP3-204ENST00000574911 NID2Q14112 1375 aa10.37□□□□□ -0.75
NCBP3-204ENST00000574911 STK36Q9NRP7 1315 aa10.36□□□□□ -0.75
NCBP3-204ENST00000574911 RANBP6O60518 1105 aaKnown RBP10.36□□□□□ -0.75
NCBP3-204ENST00000574911 U2AF2P26368 475 aaKnown RBP eCLIP10.36□□□□□ -0.752e-6■■□□□ 13
NCBP3-204ENST00000574911 TMEM67Q5HYA8 995 aa10.36□□□□□ -0.75
NCBP3-204ENST00000574911 PHKBQ93100 1093 aa10.36□□□□□ -0.75
NCBP3-204ENST00000574911 FBXW7Q969H0 707 aa10.36□□□□□ -0.75
NCBP3-204ENST00000574911 INCENPQ9NQS7 918 aa10.36□□□□□ -0.75
NCBP3-204ENST00000574911 IMPACTQ9P2X3 320 aa10.36□□□□□ -0.75
NCBP3-204ENST00000574911 GOLGA8AA7E2F4 631 aa10.36□□□□□ -0.75
NCBP3-204ENST00000574911 SKILP12757 684 aa10.36□□□□□ -0.75
NCBP3-204ENST00000574911 MARCKSP29966 332 aaPredicted RBP10.36□□□□□ -0.75
NCBP3-204ENST00000574911 IARSP41252 1262 aaKnown RBP10.36□□□□□ -0.75
NCBP3-204ENST00000574911 GSDMDP57764 484 aa10.36□□□□□ -0.75
NCBP3-204ENST00000574911 NCAPHQ15003 741 aa10.36□□□□□ -0.75
NCBP3-204ENST00000574911 SUSD4Q5VX71 490 aa10.36□□□□□ -0.75
NCBP3-204ENST00000574911 MAGEB6Q8N7X4 407 aa10.36□□□□□ -0.75
NCBP3-204ENST00000574911 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.36□□□□□ -0.75
NCBP3-204ENST00000574911 EXOC5O00471 708 aa10.35□□□□□ -0.75
NCBP3-204ENST00000574911 MBD4O95243 580 aa10.35□□□□□ -0.75
NCBP3-204ENST00000574911 EIF5P55010 431 aaKnown RBP10.35□□□□□ -0.75
NCBP3-204ENST00000574911 MAP3K12Q12852 859 aa10.35□□□□□ -0.75
NCBP3-204ENST00000574911 RASGRF1Q13972 1273 aa10.35□□□□□ -0.75
NCBP3-204ENST00000574911 SYCP1Q15431 976 aa10.35□□□□□ -0.75
NCBP3-204ENST00000574911 ZRSR1Q15695 479 aaKnown RBP10.35□□□□□ -0.75
NCBP3-204ENST00000574911 SHC4Q6S5L8 630 aa10.35□□□□□ -0.75
NCBP3-204ENST00000574911 NFXL1Q6ZNB6 911 aa10.35□□□□□ -0.75
NCBP3-204ENST00000574911 FILIP1Q7Z7B0 1213 aa10.35□□□□□ -0.75
NCBP3-204ENST00000574911 MICU3Q86XE3 530 aa10.35□□□□□ -0.75
NCBP3-204ENST00000574911 ZSWIM5Q9P217 1185 aa10.35□□□□□ -0.75
NCBP3-204ENST00000574911 TUBE1Q9UJT0 475 aa10.35□□□□□ -0.75
NCBP3-204ENST00000574911 GSG1L2A8MUP6 293 aa10.35□□□□□ -0.75
NCBP3-204ENST00000574911 SYKP43405 635 aa10.35□□□□□ -0.75
NCBP3-204ENST00000574911 CTDSPL2Q05D32 466 aa10.35□□□□□ -0.75
NCBP3-204ENST00000574911 RESP18Q5W5W9 173 aa10.35□□□□□ -0.75
NCBP3-204ENST00000574911 NYAP1Q6ZVC0 841 aa10.35□□□□□ -0.75
NCBP3-204ENST00000574911 JMYQ8N9B5 988 aa10.35□□□□□ -0.75
NCBP3-204ENST00000574911 NAPBQ9H115 298 aa10.35□□□□□ -0.75
NCBP3-204ENST00000574911 CNNM2Q9H8M5 875 aa10.35□□□□□ -0.75
NCBP3-204ENST00000574911 ARMT1Q9H993 441 aa10.35□□□□□ -0.75
NCBP3-204ENST00000574911 USP27XA6NNY8 438 aa10.35□□□□□ -0.75
NCBP3-204ENST00000574911 BIN1O00499 593 aa10.35□□□□□ -0.75
NCBP3-204ENST00000574911 IKBKBO14920 756 aa10.35□□□□□ -0.75
NCBP3-204ENST00000574911 FMNL1O95466 1100 aaPredicted RBP10.35□□□□□ -0.75
NCBP3-204ENST00000574911 AKNAD1Q5T1N1 836 aa10.35□□□□□ -0.75
NCBP3-204ENST00000574911 CEP135Q66GS9 1140 aa10.35□□□□□ -0.75
NCBP3-204ENST00000574911 INTS5Q6P9B9 1019 aaKnown RBP10.35□□□□□ -0.75
NCBP3-204ENST00000574911 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms