RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 RPAP1Q9BWH6 1393 aaPredicted RBP16.37■□□□□ 0.21
NDE1-209ENST00000574109 GPR75-ASB3A0A0A6YYF3 556 aa16.36■□□□□ 0.21
NDE1-209ENST00000574109 GSPT1P15170 499 aaKnown RBP16.36■□□□□ 0.21
NDE1-209ENST00000574109 CYP7A1P22680 504 aa16.36■□□□□ 0.21
NDE1-209ENST00000574109 RGS3P49796 1198 aa16.36■□□□□ 0.21
NDE1-209ENST00000574109 SAMD7Q7Z3H4 446 aa16.36■□□□□ 0.21
NDE1-209ENST00000574109 RILPL2Q969X0 211 aa16.36■□□□□ 0.21
NDE1-209ENST00000574109 ZNF532Q9HCE3 1301 aa16.36■□□□□ 0.21
NDE1-209ENST00000574109 SHTN1A0MZ66 631 aa16.35■□□□□ 0.21
NDE1-209ENST00000574109 RNF113AO15541 343 aaKnown RBP16.35■□□□□ 0.21
NDE1-209ENST00000574109 BTDP43251 543 aa16.35■□□□□ 0.21
NDE1-209ENST00000574109 PPP4CP60510 307 aa16.35■□□□□ 0.21
NDE1-209ENST00000574109 SPDYE2Q495Y8 402 aa16.35■□□□□ 0.21
NDE1-209ENST00000574109 EAPPQ56P03 285 aaPredicted RBP16.35■□□□□ 0.21
NDE1-209ENST00000574109 ZNF384Q8TF68 577 aa16.35■□□□□ 0.21
NDE1-209ENST00000574109 GGA3Q9NZ52 723 aa16.35■□□□□ 0.21
NDE1-209ENST00000574109 PGAP2Q9UHJ9 254 aa16.35■□□□□ 0.21
NDE1-209ENST00000574109 PPP2R3BQ9Y5P8 575 aa16.35■□□□□ 0.21
NDE1-209ENST00000574109 MYH8P13535 1937 aa16.35■□□□□ 0.21
NDE1-209ENST00000574109 LAMA4Q16363 1823 aa16.34■□□□□ 0.21
NDE1-209ENST00000574109 TCRBV5S4A2TA0A5A2 114 aa16.34■□□□□ 0.21
NDE1-209ENST00000574109 TNNI2P48788 182 aa16.34■□□□□ 0.21
NDE1-209ENST00000574109 APOBEC3HQ6NTF7 200 aaKnown RBP16.34■□□□□ 0.21
NDE1-209ENST00000574109 DCPSQ96C86 337 aaKnown RBP16.34■□□□□ 0.21
NDE1-209ENST00000574109 DIAPH3Q9NSV4 1193 aa16.34■□□□□ 0.21
NDE1-209ENST00000574109 RAD50Q92878 1312 aa16.34■□□□□ 0.21
NDE1-209ENST00000574109 BAZ2AQ9UIF9 1905 aaKnown RBP16.33■□□□□ 0.21
NDE1-209ENST00000574109 MAGEB6P1A0A0J9YX57 407 aa16.33■□□□□ 0.2
NDE1-209ENST00000574109 KIF3CO14782 793 aa16.33■□□□□ 0.2
NDE1-209ENST00000574109 NPM3O75607 178 aaKnown RBP16.33■□□□□ 0.2
NDE1-209ENST00000574109 EGFRP00533 1210 aa16.33■□□□□ 0.2
NDE1-209ENST00000574109 SDSP20132 328 aa16.33■□□□□ 0.2
NDE1-209ENST00000574109 MFAP1P55081 439 aaKnown RBP16.33■□□□□ 0.2
NDE1-209ENST00000574109 NBPF9Q3BBW0 867 aa16.33■□□□□ 0.2
NDE1-209ENST00000574109 RBM26Q5T8P6 1007 aaKnown RBP16.33■□□□□ 0.2
NDE1-209ENST00000574109 RBM46Q8TBY0 533 aaKnown RBP16.33■□□□□ 0.2
NDE1-209ENST00000574109 AIDAQ96BJ3 306 aa16.33■□□□□ 0.2
NDE1-209ENST00000574109 TOMM70O94826 608 aa16.32■□□□□ 0.2
NDE1-209ENST00000574109 GNAT2P19087 354 aa16.32■□□□□ 0.2
NDE1-209ENST00000574109 HIRAP54198 1017 aaPredicted RBP16.32■□□□□ 0.2
NDE1-209ENST00000574109 ZMYM1Q5SVZ6 1142 aa16.32■□□□□ 0.2
NDE1-209ENST00000574109 CHADLQ6NUI6 762 aa16.32■□□□□ 0.2
NDE1-209ENST00000574109 CASC1Q6TDU7 716 aa16.32■□□□□ 0.2
NDE1-209ENST00000574109 FAM83AQ86UY5 434 aa16.32■□□□□ 0.2
NDE1-209ENST00000574109 SULF1Q8IWU6 871 aa16.32■□□□□ 0.2
NDE1-209ENST00000574109 SMC1BQ8NDV3 1235 aa16.32■□□□□ 0.2
NDE1-209ENST00000574109 RUFY2Q8WXA3 655 aa16.32■□□□□ 0.2
NDE1-209ENST00000574109 PRMT6Q96LA8 375 aaPredicted RBP16.32■□□□□ 0.2
NDE1-209ENST00000574109 IDI2Q9BXS1 227 aa16.32■□□□□ 0.2
NDE1-209ENST00000574109 CRNKL1Q9BZJ0 848 aaKnown RBP16.32■□□□□ 0.2
NDE1-209ENST00000574109 HELLSQ9NRZ9 838 aa16.32■□□□□ 0.2
NDE1-209ENST00000574109 AATFQ9NY61 560 aaKnown RBP eCLIP16.32■□□□□ 0.2
NDE1-209ENST00000574109 ZNF70Q9UC06 446 aaPredicted RBP16.32■□□□□ 0.2
NDE1-209ENST00000574109 ANGEL2Q5VTE6 544 aaKnown RBP16.31■□□□□ 0.2
NDE1-209ENST00000574109 CDC42EP5Q6NZY7 148 aa16.31■□□□□ 0.2
NDE1-209ENST00000574109 ADGRA1Q86SQ6 560 aa16.31■□□□□ 0.2
NDE1-209ENST00000574109 DDRGK1Q96HY6 314 aa16.31■□□□□ 0.2
NDE1-209ENST00000574109 RIOK1Q9BRS2 568 aaKnown RBP16.31■□□□□ 0.2
NDE1-209ENST00000574109 TDRD3Q9H7E2 651 aaKnown RBP16.31■□□□□ 0.2
NDE1-209ENST00000574109 USP40Q9NVE5 1235 aa16.31■□□□□ 0.2
NDE1-209ENST00000574109 CLEC11AQ9Y240 323 aa16.31■□□□□ 0.2
NDE1-209ENST00000574109 PAPPA2Q9BXP8 1791 aa16.31■□□□□ 0.2
NDE1-209ENST00000574109 ENTPD3O75355 529 aa16.3■□□□□ 0.2
NDE1-209ENST00000574109 RHBDL3P58872 404 aa16.3■□□□□ 0.2
NDE1-209ENST00000574109 FSTL1Q12841 308 aa16.3■□□□□ 0.2
NDE1-209ENST00000574109 CDC37L1Q7L3B6 337 aa16.3■□□□□ 0.2
NDE1-209ENST00000574109 TEX11Q8IYF3 940 aa16.3■□□□□ 0.2
NDE1-209ENST00000574109 HOOK2Q96ED9 719 aa16.3■□□□□ 0.2
NDE1-209ENST00000574109 VEZTQ9HBM0 779 aa16.3■□□□□ 0.2
NDE1-209ENST00000574109 ATRNL1Q5VV63 1379 aa16.29■□□□□ 0.2
NDE1-209ENST00000574109 CLRN2A0PK11 232 aa16.29■□□□□ 0.2
NDE1-209ENST00000574109 MBD4O95243 580 aa16.29■□□□□ 0.2
NDE1-209ENST00000574109 KRT26Q7Z3Y9 468 aa16.29■□□□□ 0.2
NDE1-209ENST00000574109 MIGA1Q8NAN2 632 aa16.29■□□□□ 0.2
NDE1-209ENST00000574109 TAOK2Q9UL54 1235 aa16.29■□□□□ 0.2
NDE1-209ENST00000574109 GPAA1O43292 621 aa16.28■□□□□ 0.2
NDE1-209ENST00000574109 CDC45O75419 566 aa16.28■□□□□ 0.2
NDE1-209ENST00000574109 MCMDC2Q4G0Z9 681 aa16.28■□□□□ 0.2
NDE1-209ENST00000574109 SH3RF3Q8TEJ3 882 aaPredicted RBP16.28■□□□□ 0.2
NDE1-209ENST00000574109 ATP8A2Q9NTI2 1148 aa16.28■□□□□ 0.2
NDE1-209ENST00000574109 PCDHAC2Q9Y5I4 1007 aa16.28■□□□□ 0.2
NDE1-209ENST00000574109 SIPA1L1O43166 1804 aa16.28■□□□□ 0.2
NDE1-209ENST00000574109 ZMYM6O95789 1325 aa16.27■□□□□ 0.2
NDE1-209ENST00000574109 FLT1P17948 1338 aa16.27■□□□□ 0.2
NDE1-209ENST00000574109 CCDC171Q6TFL3 1326 aa16.27■□□□□ 0.2
NDE1-209ENST00000574109 EIF5BO60841 1220 aaKnown RBP16.27■□□□□ 0.2
NDE1-209ENST00000574109 WDHD1O75717 1129 aaPredicted RBP16.27■□□□□ 0.2
NDE1-209ENST00000574109 NF2P35240 595 aa16.27■□□□□ 0.2
NDE1-209ENST00000574109 USP5P45974 858 aa16.27■□□□□ 0.2
NDE1-209ENST00000574109 GIMAP6Q6P9H5 292 aa16.27■□□□□ 0.2
NDE1-209ENST00000574109 AMOTL1Q8IY63 956 aa16.27■□□□□ 0.2
NDE1-209ENST00000574109 FAM151AQ8WW52 585 aa16.27■□□□□ 0.2
NDE1-209ENST00000574109 OSBP2Q969R2 916 aa16.27■□□□□ 0.2
NDE1-209ENST00000574109 PUS7LQ9H0K6 701 aaKnown RBP16.27■□□□□ 0.2
NDE1-209ENST00000574109 DHX36Q9H2U1 1008 aaKnown RBP16.27■□□□□ 0.2
NDE1-209ENST00000574109 OTOFQ9HC10 1997 aa16.27■□□□□ 0.19
NDE1-209ENST00000574109 A0A0D9SFI3 127 aa16.26■□□□□ 0.19
NDE1-209ENST00000574109 POTEIP0CG38 1075 aa16.26■□□□□ 0.19
NDE1-209ENST00000574109 POTEJP0CG39 1038 aa16.26■□□□□ 0.19
NDE1-209ENST00000574109 NMIQ13287 307 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms