RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 KRTAP4-8Q9BYQ9 185 aa6.11□□□□□ -1.43
CNOT1-219ENST00000569882 PODXL2Q9NZ53 605 aa6.11□□□□□ -1.43
CNOT1-219ENST00000569882 CHMP3Q9Y3E7 222 aa6.11□□□□□ -1.43
CNOT1-219ENST00000569882 ZC3H4Q9UPT8 1303 aaKnown RBP6.1□□□□□ -1.43
CNOT1-219ENST00000569882 MYH3P11055 1940 aa6.1□□□□□ -1.43
CNOT1-219ENST00000569882 DICER1Q9UPY3 1922 aaKnown RBP6.1□□□□□ -1.43
CNOT1-219ENST00000569882 PPIP5K2O43314 1243 aa6.1□□□□□ -1.43
CNOT1-219ENST00000569882 TIMP2P16035 220 aa6.1□□□□□ -1.43
CNOT1-219ENST00000569882 LMOD1P29536 600 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-219ENST00000569882 GRM5P41594 1212 aa6.1□□□□□ -1.43
CNOT1-219ENST00000569882 EIF6P56537 245 aaKnown RBP6.1□□□□□ -1.43
CNOT1-219ENST00000569882 HNRNPUQ00839 825 aaKnown RBP eCLIP6.1□□□□□ -1.43
CNOT1-219ENST00000569882 FKBP4Q02790 459 aaKnown RBP eCLIP6.1□□□□□ -1.43
CNOT1-219ENST00000569882 CCDC152Q4G0S7 254 aa6.1□□□□□ -1.43
CNOT1-219ENST00000569882 TAF7LQ5H9L4 462 aa6.1□□□□□ -1.43
CNOT1-219ENST00000569882 DPP8Q6V1X1 898 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-219ENST00000569882 SH3RF1Q7Z6J0 888 aa6.1□□□□□ -1.43
CNOT1-219ENST00000569882 BPHLQ86WA6 291 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-219ENST00000569882 NIM1KQ8IY84 436 aa6.1□□□□□ -1.43
CNOT1-219ENST00000569882 LARGE2Q8N3Y3 721 aa6.1□□□□□ -1.43
CNOT1-219ENST00000569882 ZBTB38Q8NAP3 1195 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-219ENST00000569882 CCDC85AQ96PX6 553 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-219ENST00000569882 CRAMP1Q96RY5 1269 aa6.1□□□□□ -1.43
CNOT1-219ENST00000569882 METTL22Q9BUU2 404 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-219ENST00000569882 KLF16Q9BXK1 252 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-219ENST00000569882 ZNF277Q9NRM2 450 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-219ENST00000569882 GTF3C3Q9Y5Q9 886 aa6.1□□□□□ -1.43
CNOT1-219ENST00000569882 FER1L6Q2WGJ9 1857 aa6.1□□□□□ -1.43
CNOT1-219ENST00000569882 LAMB2P55268 1798 aa6.1□□□□□ -1.43
CNOT1-219ENST00000569882 RIC1Q4ADV7 1423 aa6.09□□□□□ -1.43
CNOT1-219ENST00000569882 MAGEB6P1A0A0J9YX57 407 aa6.09□□□□□ -1.43
CNOT1-219ENST00000569882 H3BM21 787 aa6.09□□□□□ -1.43
CNOT1-219ENST00000569882 NFKBIEO00221 500 aa6.09□□□□□ -1.43
CNOT1-219ENST00000569882 PDE8AO60658 829 aa6.09□□□□□ -1.43
CNOT1-219ENST00000569882 BBOX1O75936 387 aa6.09□□□□□ -1.43
CNOT1-219ENST00000569882 IARSP41252 1262 aaKnown RBP6.09□□□□□ -1.43
CNOT1-219ENST00000569882 WDR4P57081 412 aaKnown RBP6.09□□□□□ -1.43
CNOT1-219ENST00000569882 C1QTNF8P60827 252 aa6.09□□□□□ -1.43
CNOT1-219ENST00000569882 GRAPQ13588 217 aa6.09□□□□□ -1.43
CNOT1-219ENST00000569882 NR6A1Q15406 480 aa6.09□□□□□ -1.43
CNOT1-219ENST00000569882 CRY2Q49AN0 593 aa6.09□□□□□ -1.43
CNOT1-219ENST00000569882 GPAT2Q6NUI2 795 aa6.09□□□□□ -1.43
CNOT1-219ENST00000569882 SH3BP5LQ7L8J4 393 aa6.09□□□□□ -1.43
CNOT1-219ENST00000569882 UBE3BQ7Z3V4 1068 aa6.09□□□□□ -1.43
CNOT1-219ENST00000569882 TMC4Q7Z404 712 aa6.09□□□□□ -1.43
CNOT1-219ENST00000569882 LRP10Q7Z4F1 713 aa6.09□□□□□ -1.43
CNOT1-219ENST00000569882 ANKRD18AQ8IVF6 992 aa6.09□□□□□ -1.43
CNOT1-219ENST00000569882 SYNE4Q8N205 404 aa6.09□□□□□ -1.43
CNOT1-219ENST00000569882 GRAPLQ8TC17 118 aaPredicted RBP6.09□□□□□ -1.43
CNOT1-219ENST00000569882 DNAAF4Q8WXU2 420 aa6.09□□□□□ -1.43
CNOT1-219ENST00000569882 CDC5LQ99459 802 aaKnown RBP6.09□□□□□ -1.43
CNOT1-219ENST00000569882 ZFAND3Q9H8U3 227 aa6.09□□□□□ -1.43
CNOT1-219ENST00000569882 RRAGCQ9HB90 399 aa6.09□□□□□ -1.43
CNOT1-219ENST00000569882 NMRK2Q9NPI5 230 aa6.09□□□□□ -1.43
CNOT1-219ENST00000569882 SMC4Q9NTJ3 1288 aa6.09□□□□□ -1.43
CNOT1-219ENST00000569882 C9orf78Q9NZ63 289 aaPredicted RBP6.09□□□□□ -1.43
CNOT1-219ENST00000569882 ANKIB1Q9P2G1 1089 aa6.09□□□□□ -1.43
CNOT1-219ENST00000569882 NSFL1CQ9UNZ2 370 aaKnown RBP6.09□□□□□ -1.43
CNOT1-219ENST00000569882 GJA3Q9Y6H8 435 aa6.09□□□□□ -1.43
CNOT1-219ENST00000569882 SPEF2Q9C093 1822 aa6.09□□□□□ -1.44
CNOT1-219ENST00000569882 DDX60Q8IY21 1712 aaKnown RBP6.08□□□□□ -1.44
CNOT1-219ENST00000569882 ADCY9O60503 1353 aa6.08□□□□□ -1.44
CNOT1-219ENST00000569882 UTRNP46939 3433 aa6.08□□□□□ -1.44
CNOT1-219ENST00000569882 ABCC4O15439 1325 aa6.08□□□□□ -1.44
CNOT1-219ENST00000569882 LTBP3Q9NS15 1303 aa6.08□□□□□ -1.44
CNOT1-219ENST00000569882 IQCA1LA6NCM1 817 aa6.08□□□□□ -1.44
CNOT1-219ENST00000569882 VAMP4O75379 141 aa6.08□□□□□ -1.44
CNOT1-219ENST00000569882 PCCAP05165 728 aaPredicted RBP6.08□□□□□ -1.44
CNOT1-219ENST00000569882 VEGFAP15692 232 aaPredicted RBP6.08□□□□□ -1.44
CNOT1-219ENST00000569882 IGHMBP2P38935 993 aaKnown RBP6.08□□□□□ -1.44
CNOT1-219ENST00000569882 KCNJ4P48050 445 aa6.08□□□□□ -1.44
CNOT1-219ENST00000569882 CWF19L2Q2TBE0 894 aaKnown RBP6.08□□□□□ -1.44
CNOT1-219ENST00000569882 EAPPQ56P03 285 aaPredicted RBP6.08□□□□□ -1.44
CNOT1-219ENST00000569882 SLC10A5Q5PT55 438 aa6.08□□□□□ -1.44
CNOT1-219ENST00000569882 PPP2R2DQ66LE6 453 aa6.08□□□□□ -1.44
CNOT1-219ENST00000569882 OLFM4Q6UX06 510 aa6.08□□□□□ -1.44
CNOT1-219ENST00000569882 ARMC2Q8NEN0 867 aa6.08□□□□□ -1.44
CNOT1-219ENST00000569882 EPS8L1Q8TE68 723 aa6.08□□□□□ -1.44
CNOT1-219ENST00000569882 JARID2Q92833 1246 aaPredicted RBP6.08□□□□□ -1.44
CNOT1-219ENST00000569882 ITPKCQ96DU7 683 aa6.08□□□□□ -1.44
CNOT1-219ENST00000569882 ZFP42Q96MM3 310 aa6.08□□□□□ -1.44
CNOT1-219ENST00000569882 EYA3Q99504 573 aa6.08□□□□□ -1.44
CNOT1-219ENST00000569882 MPHOSPH8Q99549 860 aa6.08□□□□□ -1.44
CNOT1-219ENST00000569882 ISCA1Q9BUE6 129 aa6.08□□□□□ -1.44
CNOT1-219ENST00000569882 C1QTNF2Q9BXJ5 285 aa6.08□□□□□ -1.44
CNOT1-219ENST00000569882 BCL2L13Q9BXK5 485 aa6.08□□□□□ -1.44
CNOT1-219ENST00000569882 ATP6V0A2Q9Y487 856 aa6.08□□□□□ -1.44
CNOT1-219ENST00000569882 TAF1P21675 1872 aa6.08□□□□□ -1.44
CNOT1-219ENST00000569882 KLRG2A4D1S0 409 aaPredicted RBP6.07□□□□□ -1.44
CNOT1-219ENST00000569882 GLTPD2A6NH11 291 aa6.07□□□□□ -1.44
CNOT1-219ENST00000569882 NEURL1BA8MQ27 555 aa6.07□□□□□ -1.44
CNOT1-219ENST00000569882 F6X3S4 739 aa6.07□□□□□ -1.44
CNOT1-219ENST00000569882 AP1G2O75843 785 aa6.07□□□□□ -1.44
CNOT1-219ENST00000569882 TOMM70O94826 608 aa6.07□□□□□ -1.44
CNOT1-219ENST00000569882 HOXA10P31260 410 aaPredicted RBP6.07□□□□□ -1.44
CNOT1-219ENST00000569882 CTSWP56202 376 aa6.07□□□□□ -1.44
CNOT1-219ENST00000569882 TRIM28Q13263 835 aaKnown RBP6.07□□□□□ -1.44
CNOT1-219ENST00000569882 AOC3Q16853 763 aa6.07□□□□□ -1.44
CNOT1-219ENST00000569882 G2E3Q7L622 706 aa6.07□□□□□ -1.44
CNOT1-219ENST00000569882 SMC1BQ8NDV3 1235 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms