RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 ZC3H12CQ9C0D7 883 aaKnown RBP12.95□□□□□ -0.34
PDXDC1-216ENST00000569715 SH2B1Q9NRF2 756 aaPredicted RBP12.95□□□□□ -0.34
PDXDC1-216ENST00000569715 ATF5Q9Y2D1 282 aaPredicted RBP12.95□□□□□ -0.34
PDXDC1-216ENST00000569715 ZDHHC9Q9Y397 364 aa12.95□□□□□ -0.34
PDXDC1-216ENST00000569715 SCN9AQ15858 1988 aa12.95□□□□□ -0.34
PDXDC1-216ENST00000569715 GTF2IP78347 998 aa12.95□□□□□ -0.34
PDXDC1-216ENST00000569715 CDK5RAP2Q96SN8 1893 aa12.95□□□□□ -0.34
PDXDC1-216ENST00000569715 CYP2D7A0A087X1C5 515 aa12.95□□□□□ -0.34
PDXDC1-216ENST00000569715 EVX2Q03828 476 aa12.95□□□□□ -0.34
PDXDC1-216ENST00000569715 APOBRQ0VD83 1088 aa12.95□□□□□ -0.34
PDXDC1-216ENST00000569715 NCOA7Q8NI08 942 aa12.95□□□□□ -0.34
PDXDC1-216ENST00000569715 NACAP1Q9BZK3 213 aa12.95□□□□□ -0.34
PDXDC1-216ENST00000569715 COA1Q9GZY4 146 aa12.95□□□□□ -0.34
PDXDC1-216ENST00000569715 TMX4Q9H1E5 349 aaPredicted RBP12.95□□□□□ -0.34
PDXDC1-216ENST00000569715 FGD1P98174 961 aa12.94□□□□□ -0.34
PDXDC1-216ENST00000569715 FBXW7Q969H0 707 aa12.94□□□□□ -0.34
PDXDC1-216ENST00000569715 MXD3Q9BW11 206 aa12.94□□□□□ -0.34
PDXDC1-216ENST00000569715 AGXT2Q9BYV1 514 aa12.94□□□□□ -0.34
PDXDC1-216ENST00000569715 ADAMTSL1Q8N6G6 1762 aa12.94□□□□□ -0.34
PDXDC1-216ENST00000569715 B4E1Z4 1266 aa12.94□□□□□ -0.34
PDXDC1-216ENST00000569715 PRC1O43663 620 aa12.94□□□□□ -0.34
PDXDC1-216ENST00000569715 R3HDM1Q15032 1099 aaKnown RBP12.94□□□□□ -0.34
PDXDC1-216ENST00000569715 CYB5R4Q7L1T6 521 aa12.94□□□□□ -0.34
PDXDC1-216ENST00000569715 RALYLQ86SE5 291 aaKnown RBP12.94□□□□□ -0.34
PDXDC1-216ENST00000569715 LAMB1P07942 1786 aa12.94□□□□□ -0.34
PDXDC1-216ENST00000569715 DPEP1P16444 411 aa12.94□□□□□ -0.34
PDXDC1-216ENST00000569715 DBNDD1Q9H9R9 158 aa12.94□□□□□ -0.34
PDXDC1-216ENST00000569715 KCNQ5Q9NR82 932 aa12.94□□□□□ -0.34
PDXDC1-216ENST00000569715 ZNF646O15015 1829 aaPredicted RBP12.94□□□□□ -0.34
PDXDC1-216ENST00000569715 FAM205AQ6ZU69 1335 aa12.94□□□□□ -0.34
PDXDC1-216ENST00000569715 C21orf2O43822 256 aa12.93□□□□□ -0.34
PDXDC1-216ENST00000569715 KCNA3P22001 575 aa12.93□□□□□ -0.34
PDXDC1-216ENST00000569715 FOXD4L5Q5VV16 416 aaPredicted RBP12.93□□□□□ -0.34
PDXDC1-216ENST00000569715 CERS5Q8N5B7 392 aa12.93□□□□□ -0.34
PDXDC1-216ENST00000569715 FOXD4L4Q8WXT5 416 aaPredicted RBP12.93□□□□□ -0.34
PDXDC1-216ENST00000569715 MINDY4BA8MYZ0 360 aa12.93□□□□□ -0.34
PDXDC1-216ENST00000569715 MCM5P33992 734 aa12.93□□□□□ -0.34
PDXDC1-216ENST00000569715 PPARAQ07869 468 aa12.93□□□□□ -0.34
PDXDC1-216ENST00000569715 UPF1Q92900 1129 aaKnown RBP eCLIP12.93□□□□□ -0.343e-8■■■■□ 24.6
PDXDC1-216ENST00000569715 SH3RF3Q8TEJ3 882 aaPredicted RBP12.92□□□□□ -0.34
PDXDC1-216ENST00000569715 RTFDC1Q9BY42 306 aaPredicted RBP12.92□□□□□ -0.34
PDXDC1-216ENST00000569715 MROH7-TTC4A0A0A0MT08 1334 aa12.92□□□□□ -0.34
PDXDC1-216ENST00000569715 AKNAD1Q5T1N1 836 aa12.92□□□□□ -0.34
PDXDC1-216ENST00000569715 GTF3C6Q969F1 213 aa12.92□□□□□ -0.34
PDXDC1-216ENST00000569715 EYA3Q99504 573 aa12.92□□□□□ -0.34
PDXDC1-216ENST00000569715 CRNKL1Q9BZJ0 848 aaKnown RBP12.92□□□□□ -0.34
PDXDC1-216ENST00000569715 DCP1AQ9NPI6 582 aaPredicted RBP12.92□□□□□ -0.34
PDXDC1-216ENST00000569715 SMC3Q9UQE7 1217 aa12.92□□□□□ -0.34
PDXDC1-216ENST00000569715 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.92□□□□□ -0.34
PDXDC1-216ENST00000569715 NAV1Q8NEY1 1877 aa12.92□□□□□ -0.34
PDXDC1-216ENST00000569715 GJB2P29033 226 aa12.92□□□□□ -0.34
PDXDC1-216ENST00000569715 NUCB2P80303 420 aa12.92□□□□□ -0.34
PDXDC1-216ENST00000569715 CHAMP1Q96JM3 812 aa12.92□□□□□ -0.34
PDXDC1-216ENST00000569715 SCRN1Q12765 414 aa12.91□□□□□ -0.34
PDXDC1-216ENST00000569715 TRDNQ13061 729 aa12.91□□□□□ -0.34
PDXDC1-216ENST00000569715 SLC4A8Q2Y0W8 1093 aa12.91□□□□□ -0.34
PDXDC1-216ENST00000569715 CTR9Q6PD62 1173 aa12.91□□□□□ -0.34
PDXDC1-216ENST00000569715 F8W031 263 aaPredicted RBP12.91□□□□□ -0.34
PDXDC1-216ENST00000569715 CYP2D6P10635 497 aa12.91□□□□□ -0.34
PDXDC1-216ENST00000569715 GSTO1P78417 241 aa12.91□□□□□ -0.34
PDXDC1-216ENST00000569715 AOC3Q16853 763 aa12.91□□□□□ -0.34
PDXDC1-216ENST00000569715 TTLL6Q8N841 843 aa12.91□□□□□ -0.34
PDXDC1-216ENST00000569715 TBC1D22AQ8WUA7 517 aa12.91□□□□□ -0.34
PDXDC1-216ENST00000569715 STAG1Q8WVM7 1258 aa12.91□□□□□ -0.34
PDXDC1-216ENST00000569715 SENP2Q9HC62 589 aa12.91□□□□□ -0.34
PDXDC1-216ENST00000569715 BRPF3Q9ULD4 1205 aa12.91□□□□□ -0.34
PDXDC1-216ENST00000569715 KDM4AO75164 1064 aa12.91□□□□□ -0.34
PDXDC1-216ENST00000569715 RRP12Q5JTH9 1297 aaKnown RBP12.91□□□□□ -0.34
PDXDC1-216ENST00000569715 RAB11FIP4Q86YS3 637 aa12.91□□□□□ -0.34
PDXDC1-216ENST00000569715 MTFR1LQ9H019 292 aa12.91□□□□□ -0.34
PDXDC1-216ENST00000569715 NAP1L2Q9ULW6 460 aaPredicted RBP12.91□□□□□ -0.34
PDXDC1-216ENST00000569715 PSDA5PKW4 1024 aaPredicted RBP12.9□□□□□ -0.34
PDXDC1-216ENST00000569715 USP17L12C9JPN9 530 aa12.9□□□□□ -0.34
PDXDC1-216ENST00000569715 USP17L21D6R901 530 aa12.9□□□□□ -0.34
PDXDC1-216ENST00000569715 G3V3G9 751 aa12.9□□□□□ -0.34
PDXDC1-216ENST00000569715 MCM4P33991 863 aa12.9□□□□□ -0.34
PDXDC1-216ENST00000569715 BTDP43251 543 aa12.9□□□□□ -0.34
PDXDC1-216ENST00000569715 DCAF8Q5TAQ9 597 aa12.9□□□□□ -0.34
PDXDC1-216ENST00000569715 TMED8Q6PL24 325 aaPredicted RBP12.9□□□□□ -0.34
PDXDC1-216ENST00000569715 MFSD6Q6ZSS7 791 aa12.9□□□□□ -0.34
PDXDC1-216ENST00000569715 NCOA5Q9HCD5 579 aaKnown RBP12.9□□□□□ -0.34
PDXDC1-216ENST00000569715 JAK2O60674 1132 aa12.9□□□□□ -0.34
PDXDC1-216ENST00000569715 FBXL16Q8N461 479 aa12.9□□□□□ -0.34
PDXDC1-216ENST00000569715 TOMM22Q9NS69 142 aa12.9□□□□□ -0.34
PDXDC1-216ENST00000569715 ECE2O60344 883 aa12.9□□□□□ -0.35
PDXDC1-216ENST00000569715 PFKFB2O60825 505 aa12.9□□□□□ -0.35
PDXDC1-216ENST00000569715 BRD1O95696 1058 aa12.9□□□□□ -0.35
PDXDC1-216ENST00000569715 PDIA3P30101 505 aaKnown RBP12.9□□□□□ -0.35
PDXDC1-216ENST00000569715 CCT2P78371 535 aaKnown RBP12.9□□□□□ -0.35
PDXDC1-216ENST00000569715 ZSWIM5Q9P217 1185 aa12.9□□□□□ -0.35
PDXDC1-216ENST00000569715 ANAPC4Q9UJX5 808 aa12.9□□□□□ -0.35
PDXDC1-216ENST00000569715 BRCA1P38398 1863 aaKnown RBP12.89□□□□□ -0.35
PDXDC1-216ENST00000569715 WDR19Q8NEZ3 1342 aa12.89□□□□□ -0.35
PDXDC1-216ENST00000569715 MKRN1Q9UHC7 482 aaKnown RBP12.89□□□□□ -0.35
PDXDC1-216ENST00000569715 DDX60LQ5H9U9 1706 aaKnown RBP12.89□□□□□ -0.35
PDXDC1-216ENST00000569715 SH2B2O14492 632 aaPredicted RBP12.89□□□□□ -0.35
PDXDC1-216ENST00000569715 USP17L8P0C7I0 530 aa12.89□□□□□ -0.35
PDXDC1-216ENST00000569715 GIMAP6Q6P9H5 292 aa12.89□□□□□ -0.35
PDXDC1-216ENST00000569715 ATP8A2Q9NTI2 1148 aa12.89□□□□□ -0.35
PDXDC1-216ENST00000569715 GAKO14976 1311 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms