RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 LMNB2Q03252 620 aa7.42□□□□□ -1.22
KARS-211ENST00000569298 KCNH2Q12809 1159 aa7.42□□□□□ -1.22
KARS-211ENST00000569298 PABPC4Q13310 644 aaKnown RBP eCLIP7.42□□□□□ -1.227e-18■■■■□ 25
KARS-211ENST00000569298 KRT72Q14CN4 511 aa7.42□□□□□ -1.22
KARS-211ENST00000569298 PTPN14Q15678 1187 aa7.42□□□□□ -1.22
KARS-211ENST00000569298 ELF2Q15723 593 aa7.42□□□□□ -1.22
KARS-211ENST00000569298 CCDC57Q2TAC2 916 aa7.42□□□□□ -1.22
KARS-211ENST00000569298 MFSD4BQ5TF39 518 aa7.42□□□□□ -1.22
KARS-211ENST00000569298 CWF19L1Q69YN2 538 aaKnown RBP7.42□□□□□ -1.22
KARS-211ENST00000569298 TLDC1Q6P9B6 456 aa7.42□□□□□ -1.22
KARS-211ENST00000569298 KCNV1Q6PIU1 500 aa7.42□□□□□ -1.22
KARS-211ENST00000569298 MTHFD1LQ6UB35 978 aa7.42□□□□□ -1.22
KARS-211ENST00000569298 LYPD8Q6UX82 237 aa7.42□□□□□ -1.22
KARS-211ENST00000569298 ARHGAP22Q7Z5H3 698 aa7.42□□□□□ -1.22
KARS-211ENST00000569298 YTHDF3Q7Z739 585 aaKnown RBP7.42□□□□□ -1.22
KARS-211ENST00000569298 STAG2Q8N3U4 1231 aa7.42□□□□□ -1.22
KARS-211ENST00000569298 CEP112Q8N8E3 955 aa7.42□□□□□ -1.22
KARS-211ENST00000569298 TMEM87AQ8NBN3 555 aa7.42□□□□□ -1.22
KARS-211ENST00000569298 CHMP7Q8WUX9 453 aaPredicted RBP7.42□□□□□ -1.22
KARS-211ENST00000569298 ARHGAP45Q92619 1136 aa7.42□□□□□ -1.22
KARS-211ENST00000569298 ZKSCAN4Q969J2 545 aaPredicted RBP7.42□□□□□ -1.22
KARS-211ENST00000569298 GJD4Q96KN9 370 aaPredicted RBP7.42□□□□□ -1.22
KARS-211ENST00000569298 JPH2Q9BR39 696 aaPredicted RBP7.42□□□□□ -1.22
KARS-211ENST00000569298 ARHGEF10LQ9HCE6 1279 aa7.42□□□□□ -1.22
KARS-211ENST00000569298 HMX1Q9NP08 348 aaPredicted RBP7.42□□□□□ -1.22
KARS-211ENST00000569298 TUBA8Q9NY65 449 aaPredicted RBP7.42□□□□□ -1.22
KARS-211ENST00000569298 GMEB1Q9Y692 573 aa7.42□□□□□ -1.22
KARS-211ENST00000569298 GAPVD1Q14C86 1478 aa7.42□□□□□ -1.22
KARS-211ENST00000569298 FYCO1Q9BQS8 1478 aa7.42□□□□□ -1.22
KARS-211ENST00000569298 CUX1P39880 1505 aa7.42□□□□□ -1.22
KARS-211ENST00000569298 POM121CA8CG34 1229 aa7.41□□□□□ -1.22
KARS-211ENST00000569298 EFCAB8A8MWE9 144 aa7.41□□□□□ -1.22
KARS-211ENST00000569298 MAP2K7O14733 419 aa7.41□□□□□ -1.22
KARS-211ENST00000569298 POLR3GO15318 223 aaPredicted RBP7.41□□□□□ -1.22
KARS-211ENST00000569298 HMMRO75330 724 aa7.41□□□□□ -1.22
KARS-211ENST00000569298 CAVIN2O95810 425 aa7.41□□□□□ -1.22
KARS-211ENST00000569298 MYL1P05976 194 aa7.41□□□□□ -1.22
KARS-211ENST00000569298 IDO1P14902 403 aa7.41□□□□□ -1.22
KARS-211ENST00000569298 EZRP15311 586 aaKnown RBP7.41□□□□□ -1.22
KARS-211ENST00000569298 SMCPP49901 116 aaPredicted RBP7.41□□□□□ -1.22
KARS-211ENST00000569298 FOXD4Q12950 439 aaPredicted RBP7.41□□□□□ -1.22
KARS-211ENST00000569298 DRP2Q13474 957 aa7.41□□□□□ -1.22
KARS-211ENST00000569298 PRPF4BQ13523 1007 aaKnown RBP7.41□□□□□ -1.22
KARS-211ENST00000569298 LAMB3Q13751 1172 aa7.41□□□□□ -1.22
KARS-211ENST00000569298 PKN1Q16512 942 aa7.41□□□□□ -1.22
KARS-211ENST00000569298 CLPPQ16740 277 aaPredicted RBP7.41□□□□□ -1.22
KARS-211ENST00000569298 TPD52L1Q16890 204 aaPredicted RBP7.41□□□□□ -1.22
KARS-211ENST00000569298 WASHC4Q2M389 1173 aa7.41□□□□□ -1.22
KARS-211ENST00000569298 CTC1Q2NKJ3 1217 aa7.41□□□□□ -1.22
KARS-211ENST00000569298 RRP12Q5JTH9 1297 aaKnown RBP7.41□□□□□ -1.22
KARS-211ENST00000569298 CCDC183Q5T5S1 534 aa7.41□□□□□ -1.22
KARS-211ENST00000569298 SFMBT2Q5VUG0 894 aa7.41□□□□□ -1.22
KARS-211ENST00000569298 DUSP27Q5VZP5 1158 aa7.41□□□□□ -1.22
KARS-211ENST00000569298 NUGGCQ68CJ6 796 aa7.41□□□□□ -1.22
KARS-211ENST00000569298 AFAP1Q8N556 730 aa7.41□□□□□ -1.22
KARS-211ENST00000569298 GPR161Q8N6U8 529 aaKnown RBP7.41□□□□□ -1.22
KARS-211ENST00000569298 ERMNQ8TAM6 284 aa7.41□□□□□ -1.22
KARS-211ENST00000569298 LRRN4Q8WUT4 740 aa7.41□□□□□ -1.22
KARS-211ENST00000569298 GLMNQ92990 594 aa7.41□□□□□ -1.22
KARS-211ENST00000569298 NRDE2Q9H7Z3 1164 aa7.41□□□□□ -1.22
KARS-211ENST00000569298 LUC7LQ9NQ29 371 aaKnown RBP7.41□□□□□ -1.22
KARS-211ENST00000569298 PDRG1Q9NUG6 133 aa7.41□□□□□ -1.22
KARS-211ENST00000569298 GGA2Q9UJY4 613 aa7.41□□□□□ -1.22
KARS-211ENST00000569298 CORO1CQ9ULV4 474 aaPredicted RBP7.41□□□□□ -1.22
KARS-211ENST00000569298 MTMR7Q9Y216 660 aa7.41□□□□□ -1.22
KARS-211ENST00000569298 CLASP1Q7Z460 1538 aa7.41□□□□□ -1.22
KARS-211ENST00000569298 ST8SIA5O15466 376 aa7.4□□□□□ -1.22
KARS-211ENST00000569298 SRGAP3O43295 1099 aa7.4□□□□□ -1.22
KARS-211ENST00000569298 CEP104O60308 925 aa7.4□□□□□ -1.22
KARS-211ENST00000569298 KRT38O76015 456 aa7.4□□□□□ -1.22
KARS-211ENST00000569298 TBC1D8O95759 1140 aa7.4□□□□□ -1.22
KARS-211ENST00000569298 CASTP20810 708 aaKnown RBP7.4□□□□□ -1.22
KARS-211ENST00000569298 HDLBPQ00341 1268 aaKnown RBP7.4□□□□□ -1.22
KARS-211ENST00000569298 DYNC1I2Q13409 638 aaKnown RBP7.4□□□□□ -1.22
KARS-211ENST00000569298 BRD3Q15059 726 aa7.4□□□□□ -1.22
KARS-211ENST00000569298 LRRC23Q53EV4 343 aaPredicted RBP7.4□□□□□ -1.22
KARS-211ENST00000569298 SLC30A9Q6PML9 568 aa7.4□□□□□ -1.22
KARS-211ENST00000569298 CPLX2Q6PUV4 134 aaKnown RBP7.4□□□□□ -1.22
KARS-211ENST00000569298 SEPT14Q6ZU15 432 aa7.4□□□□□ -1.22
KARS-211ENST00000569298 LRRC49Q8IUZ0 686 aa7.4□□□□□ -1.22
KARS-211ENST00000569298 ELOA2Q8IYF1 753 aaPredicted RBP7.4□□□□□ -1.22
KARS-211ENST00000569298 SMYD1Q8NB12 490 aa7.4□□□□□ -1.22
KARS-211ENST00000569298 B4GALNT2Q8NHY0 566 aa7.4□□□□□ -1.22
KARS-211ENST00000569298 RSRC1Q96IZ7 334 aaKnown RBP7.4□□□□□ -1.22
KARS-211ENST00000569298 MAK16Q9BXY0 300 aaKnown RBP7.4□□□□□ -1.22
KARS-211ENST00000569298 UNC93B1Q9H1C4 597 aa7.4□□□□□ -1.22
KARS-211ENST00000569298 ARFGAP3Q9NP61 516 aa7.4□□□□□ -1.22
KARS-211ENST00000569298 ORC3Q9UBD5 711 aaPredicted RBP7.4□□□□□ -1.22
KARS-211ENST00000569298 DDX25Q9UHL0 483 aaKnown RBP7.4□□□□□ -1.22
KARS-211ENST00000569298 ZNF521Q96K83 1311 aa7.4□□□□□ -1.22
KARS-211ENST00000569298 HFM1A2PYH4 1435 aa7.4□□□□□ -1.22
KARS-211ENST00000569298 SNAPC4Q5SXM2 1469 aa7.4□□□□□ -1.22
KARS-211ENST00000569298 GRIN2BQ13224 1484 aa7.39□□□□□ -1.23
KARS-211ENST00000569298 ARAP1Q96P48 1450 aa7.39□□□□□ -1.23
KARS-211ENST00000569298 PPIP5K1Q6PFW1 1433 aa7.39□□□□□ -1.23
KARS-211ENST00000569298 RTL1A6NKG5 1358 aa7.39□□□□□ -1.23
KARS-211ENST00000569298 BICDL2A1A5D9 508 aa7.39□□□□□ -1.23
KARS-211ENST00000569298 J3QL48 77 aa7.39□□□□□ -1.23
KARS-211ENST00000569298 ABLIM1O14639 778 aa7.39□□□□□ -1.23
KARS-211ENST00000569298 PENKP01210 267 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms