RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 VEZTQ9HBM0 779 aa11.02□□□□□ -0.64
CHD9-219ENST00000569225 ZNF646O15015 1829 aaPredicted RBP11.02□□□□□ -0.65
CHD9-219ENST00000569225 TNNI2P48788 182 aa11.02□□□□□ -0.65
CHD9-219ENST00000569225 UBE3CQ15386 1083 aa11.02□□□□□ -0.65
CHD9-219ENST00000569225 KRT26Q7Z3Y9 468 aa11.02□□□□□ -0.65
CHD9-219ENST00000569225 ZNF384Q8TF68 577 aa11.02□□□□□ -0.65
CHD9-219ENST00000569225 TDRD3Q9H7E2 651 aaKnown RBP11.02□□□□□ -0.65
CHD9-219ENST00000569225 USP40Q9NVE5 1235 aa11.02□□□□□ -0.65
CHD9-219ENST00000569225 ZNF70Q9UC06 446 aaPredicted RBP11.02□□□□□ -0.65
CHD9-219ENST00000569225 PCDHAC2Q9Y5I4 1007 aa11.02□□□□□ -0.65
CHD9-219ENST00000569225 ZNF532Q9HCE3 1301 aa11.01□□□□□ -0.65
CHD9-219ENST00000569225 MYH13Q9UKX3 1938 aa11.01□□□□□ -0.65
CHD9-219ENST00000569225 CLRN2A0PK11 232 aa11.01□□□□□ -0.65
CHD9-219ENST00000569225 RNF113AO15541 343 aaKnown RBP11.01□□□□□ -0.65
CHD9-219ENST00000569225 ADD2P35612 726 aa11.01□□□□□ -0.65
CHD9-219ENST00000569225 TTC22Q5TAA0 569 aa11.01□□□□□ -0.65
CHD9-219ENST00000569225 FKBP1CQ5VVH2 108 aa11.01□□□□□ -0.65
CHD9-219ENST00000569225 MAP1SQ66K74 1059 aaPredicted RBP11.01□□□□□ -0.65
CHD9-219ENST00000569225 PPP2R3BQ9Y5P8 575 aa11.01□□□□□ -0.65
CHD9-219ENST00000569225 ASTN2O75129 1339 aaPredicted RBP11.01□□□□□ -0.65
CHD9-219ENST00000569225 RFX7Q2KHR2 1363 aa11□□□□□ -0.65
CHD9-219ENST00000569225 PPP4CP60510 307 aa11□□□□□ -0.65
CHD9-219ENST00000569225 CDC42EP5Q6NZY7 148 aa11□□□□□ -0.65
CHD9-219ENST00000569225 RILPL2Q969X0 211 aa11□□□□□ -0.65
CHD9-219ENST00000569225 MAGEB6P1A0A0J9YX57 407 aa11□□□□□ -0.65
CHD9-219ENST00000569225 USP48Q86UV5 1035 aa11□□□□□ -0.65
CHD9-219ENST00000569225 AATFQ9NY61 560 aaKnown RBP eCLIP11□□□□□ -0.65
CHD9-219ENST00000569225 AKAP11Q9UKA4 1901 aa10.99□□□□□ -0.65
CHD9-219ENST00000569225 TCRBV5S4A2TA0A5A2 114 aa10.99□□□□□ -0.65
CHD9-219ENST00000569225 HIP1O00291 1037 aa10.99□□□□□ -0.65
CHD9-219ENST00000569225 RGS3P49796 1198 aa10.99□□□□□ -0.65
CHD9-219ENST00000569225 ADGRA1Q86SQ6 560 aa10.99□□□□□ -0.65
CHD9-219ENST00000569225 FAM83AQ86UY5 434 aa10.99□□□□□ -0.65
CHD9-219ENST00000569225 TEX11Q8IYF3 940 aa10.99□□□□□ -0.65
CHD9-219ENST00000569225 MIGA1Q8NAN2 632 aa10.99□□□□□ -0.65
CHD9-219ENST00000569225 APPBP2Q92624 585 aa10.99□□□□□ -0.65
CHD9-219ENST00000569225 GLIS2Q9BZE0 524 aaPredicted RBP10.99□□□□□ -0.65
CHD9-219ENST00000569225 DEFB129Q9H1M3 183 aa10.99□□□□□ -0.65
CHD9-219ENST00000569225 MAST2Q6P0Q8 1798 aa10.99□□□□□ -0.65
CHD9-219ENST00000569225 TCP10L2B9ZVM9 353 aa10.98□□□□□ -0.65
CHD9-219ENST00000569225 ADM5C9JUS6 153 aa10.98□□□□□ -0.65
CHD9-219ENST00000569225 RHBDL3P58872 404 aa10.98□□□□□ -0.65
CHD9-219ENST00000569225 AIDAQ96BJ3 306 aa10.98□□□□□ -0.65
CHD9-219ENST00000569225 IDI2Q9BXS1 227 aa10.98□□□□□ -0.65
CHD9-219ENST00000569225 CRNKL1Q9BZJ0 848 aaKnown RBP10.98□□□□□ -0.65
CHD9-219ENST00000569225 ADAMTSL1Q8N6G6 1762 aa10.98□□□□□ -0.65
CHD9-219ENST00000569225 ENTPD3O75355 529 aa10.98□□□□□ -0.65
CHD9-219ENST00000569225 NPM3O75607 178 aaKnown RBP10.98□□□□□ -0.65
CHD9-219ENST00000569225 NF2P35240 595 aa10.98□□□□□ -0.65
CHD9-219ENST00000569225 CACNB3P54284 484 aa10.98□□□□□ -0.65
CHD9-219ENST00000569225 RASA3Q14644 834 aa10.98□□□□□ -0.65
CHD9-219ENST00000569225 SH3RF3Q8TEJ3 882 aaPredicted RBP10.98□□□□□ -0.65
CHD9-219ENST00000569225 HOOK2Q96ED9 719 aa10.98□□□□□ -0.65
CHD9-219ENST00000569225 DIAPH3Q9NSV4 1193 aa10.98□□□□□ -0.65
CHD9-219ENST00000569225 WDHD1O75717 1129 aaPredicted RBP10.97□□□□□ -0.65
CHD9-219ENST00000569225 MBD4O95243 580 aa10.97□□□□□ -0.65
CHD9-219ENST00000569225 ITGBL1O95965 494 aaPredicted RBP10.97□□□□□ -0.65
CHD9-219ENST00000569225 GSPT1P15170 499 aaKnown RBP10.97□□□□□ -0.65
CHD9-219ENST00000569225 SDSP20132 328 aa10.97□□□□□ -0.65
CHD9-219ENST00000569225 DYNLL1P63167 89 aaKnown RBP10.97□□□□□ -0.65
CHD9-219ENST00000569225 SUPT20HL1Q3ZLR7 823 aa10.97□□□□□ -0.65
CHD9-219ENST00000569225 BMP2KLQ5H9B9 411 aa10.97□□□□□ -0.65
CHD9-219ENST00000569225 FAM151AQ8WW52 585 aa10.97□□□□□ -0.65
CHD9-219ENST00000569225 CDCA5Q96FF9 252 aa10.97□□□□□ -0.65
CHD9-219ENST00000569225 DDRGK1Q96HY6 314 aa10.97□□□□□ -0.65
CHD9-219ENST00000569225 RIOK1Q9BRS2 568 aaKnown RBP10.97□□□□□ -0.65
CHD9-219ENST00000569225 USP5P45974 858 aa10.96□□□□□ -0.65
CHD9-219ENST00000569225 NFIAQ12857 509 aa10.96□□□□□ -0.65
CHD9-219ENST00000569225 PICALMQ13492 652 aa10.96□□□□□ -0.65
CHD9-219ENST00000569225 ZMYM1Q5SVZ6 1142 aa10.96□□□□□ -0.65
CHD9-219ENST00000569225 HELLSQ9NRZ9 838 aa10.96□□□□□ -0.65
CHD9-219ENST00000569225 RPAP1Q9BWH6 1393 aaPredicted RBP10.96□□□□□ -0.66
CHD9-219ENST00000569225 TRAF5O00463 557 aa10.95□□□□□ -0.66
CHD9-219ENST00000569225 GNAT2P19087 354 aa10.95□□□□□ -0.66
CHD9-219ENST00000569225 MFAP1P55081 439 aaKnown RBP10.95□□□□□ -0.66
CHD9-219ENST00000569225 TCP10Q12799 353 aa10.95□□□□□ -0.66
CHD9-219ENST00000569225 ZSCAN29Q8IWY8 852 aaPredicted RBP10.95□□□□□ -0.66
CHD9-219ENST00000569225 LCORLQ8N3X6 602 aa10.95□□□□□ -0.66
CHD9-219ENST00000569225 PUS7LQ9H0K6 701 aaKnown RBP10.95□□□□□ -0.66
CHD9-219ENST00000569225 ARMT1Q9H993 441 aa10.95□□□□□ -0.66
CHD9-219ENST00000569225 FAM198AQ9UFP1 575 aa10.95□□□□□ -0.66
CHD9-219ENST00000569225 PASKQ96RG2 1323 aa10.95□□□□□ -0.66
CHD9-219ENST00000569225 DOCK2Q92608 1830 aa10.95□□□□□ -0.66
CHD9-219ENST00000569225 CELF2O95319 508 aaKnown RBP10.95□□□□□ -0.66
CHD9-219ENST00000569225 SLFNL1Q499Z3 407 aa10.95□□□□□ -0.66
CHD9-219ENST00000569225 SKAP1Q86WV1 359 aa10.95□□□□□ -0.66
CHD9-219ENST00000569225 TGFBRAP1Q8WUH2 860 aa10.95□□□□□ -0.66
CHD9-219ENST00000569225 OSBP2Q969R2 916 aa10.95□□□□□ -0.66
CHD9-219ENST00000569225 TMEM39BQ9GZU3 492 aa10.95□□□□□ -0.66
CHD9-219ENST00000569225 DHX36Q9H2U1 1008 aaKnown RBP10.95□□□□□ -0.66
CHD9-219ENST00000569225 ZNF408Q9H9D4 720 aa10.95□□□□□ -0.66
CHD9-219ENST00000569225 SCAF8Q9UPN6 1271 aaKnown RBP10.95□□□□□ -0.66
CHD9-219ENST00000569225 GTF3C3Q9Y5Q9 886 aa10.95□□□□□ -0.66
CHD9-219ENST00000569225 CNTNAP1P78357 1384 aa10.95□□□□□ -0.66
CHD9-219ENST00000569225 GPAA1O43292 621 aa10.94□□□□□ -0.66
CHD9-219ENST00000569225 CHGBP05060 677 aa10.94□□□□□ -0.66
CHD9-219ENST00000569225 C1QTNF8P60827 252 aa10.94□□□□□ -0.66
CHD9-219ENST00000569225 FKBP1BP68106 108 aa10.94□□□□□ -0.66
CHD9-219ENST00000569225 NMIQ13287 307 aaPredicted RBP10.94□□□□□ -0.66
CHD9-219ENST00000569225 MCMDC2Q4G0Z9 681 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms