RNA–Protein interactions for RNA: ENST00000568917.1

CNOT1-214, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-214ENST00000568917 VPS37DQ86XT2 251 aa11.17□□□□□ -0.62
CNOT1-214ENST00000568917 ZSCAN31Q96LW9 406 aaPredicted RBP11.17□□□□□ -0.62
CNOT1-214ENST00000568917 SEC62Q99442 399 aaKnown RBP11.17□□□□□ -0.62
CNOT1-214ENST00000568917 ANP32EQ9BTT0 268 aa11.17□□□□□ -0.62
CNOT1-214ENST00000568917 STK32BQ9NY57 414 aa11.17□□□□□ -0.62
CNOT1-214ENST00000568917 PODXL2Q9NZ53 605 aa11.17□□□□□ -0.62
CNOT1-214ENST00000568917 PCDHGA10Q9Y5H3 936 aa11.17□□□□□ -0.62
CNOT1-214ENST00000568917 PARP3Q9Y6F1 533 aa11.17□□□□□ -0.62
CNOT1-214ENST00000568917 MAST2Q6P0Q8 1798 aa11.17□□□□□ -0.62
CNOT1-214ENST00000568917 IRS2Q9Y4H2 1338 aa11.17□□□□□ -0.62
CNOT1-214ENST00000568917 TCRBV5S4A2TA0A5A2 114 aa11.16□□□□□ -0.62
CNOT1-214ENST00000568917 IDH1O75874 414 aaKnown RBP11.16□□□□□ -0.62
CNOT1-214ENST00000568917 NPR1P16066 1061 aa11.16□□□□□ -0.62
CNOT1-214ENST00000568917 PDE6AP16499 860 aa11.16□□□□□ -0.62
CNOT1-214ENST00000568917 GNAT2P19087 354 aa11.16□□□□□ -0.62
CNOT1-214ENST00000568917 ALDH1B1P30837 517 aa11.16□□□□□ -0.62
CNOT1-214ENST00000568917 HIBADHP31937 336 aaKnown RBP11.16□□□□□ -0.62
CNOT1-214ENST00000568917 WASHC4Q2M389 1173 aa11.16□□□□□ -0.62
CNOT1-214ENST00000568917 PI16Q6UXB8 463 aa11.16□□□□□ -0.62
CNOT1-214ENST00000568917 ZGPATQ8N5A5 531 aaKnown RBP11.16□□□□□ -0.62
CNOT1-214ENST00000568917 TMX3Q96JJ7 454 aa11.16□□□□□ -0.62
CNOT1-214ENST00000568917 FAM84BQ96KN1 310 aaPredicted RBP11.16□□□□□ -0.62
CNOT1-214ENST00000568917 JAKMIP1Q96N16 626 aaKnown RBP11.16□□□□□ -0.62
CNOT1-214ENST00000568917 SLKQ9H2G2 1235 aaPredicted RBP11.16□□□□□ -0.62
CNOT1-214ENST00000568917 PIH1D3Q9NQM4 214 aaKnown RBP11.16□□□□□ -0.62
CNOT1-214ENST00000568917 SH2B1Q9NRF2 756 aaPredicted RBP11.16□□□□□ -0.62
CNOT1-214ENST00000568917 LIMCH1Q9UPQ0 1083 aa11.16□□□□□ -0.62
CNOT1-214ENST00000568917 LAMA4Q16363 1823 aa11.16□□□□□ -0.62
CNOT1-214ENST00000568917 LTBP1Q14766 1721 aa11.16□□□□□ -0.62
CNOT1-214ENST00000568917 CCDC88AQ3V6T2 1871 aa11.16□□□□□ -0.62
CNOT1-214ENST00000568917 M0R2C6 588 aa11.15□□□□□ -0.62
CNOT1-214ENST00000568917 GPAA1O43292 621 aa11.15□□□□□ -0.62
CNOT1-214ENST00000568917 PDIA4P13667 645 aaKnown RBP11.15□□□□□ -0.62
CNOT1-214ENST00000568917 PTGER2P43116 358 aa11.15□□□□□ -0.62
CNOT1-214ENST00000568917 ALX1Q15699 326 aa11.15□□□□□ -0.62
CNOT1-214ENST00000568917 BLOC1S2Q6QNY1 142 aa11.15□□□□□ -0.62
CNOT1-214ENST00000568917 CCDC129Q6ZRS4 1044 aa11.15□□□□□ -0.62
CNOT1-214ENST00000568917 UPF3BQ9BZI7 483 aaKnown RBP11.15□□□□□ -0.62
CNOT1-214ENST00000568917 PDRG1Q9NUG6 133 aa11.15□□□□□ -0.62
CNOT1-214ENST00000568917 ZNF532Q9HCE3 1301 aa11.15□□□□□ -0.62
CNOT1-214ENST00000568917 SALL1Q9NSC2 1324 aa11.15□□□□□ -0.62
CNOT1-214ENST00000568917 SPDYE16A6NNV3 312 aaPredicted RBP11.14□□□□□ -0.63
CNOT1-214ENST00000568917 SNAP23O00161 211 aa11.14□□□□□ -0.63
CNOT1-214ENST00000568917 CYP21A2P08686 494 aa11.14□□□□□ -0.63
CNOT1-214ENST00000568917 SRGNP10124 158 aa11.14□□□□□ -0.63
CNOT1-214ENST00000568917 RPS6KB1P23443 525 aa11.14□□□□□ -0.63
CNOT1-214ENST00000568917 PBX2P40425 430 aa11.14□□□□□ -0.63
CNOT1-214ENST00000568917 NUCB2P80303 420 aa11.14□□□□□ -0.63
CNOT1-214ENST00000568917 EZH2Q15910 746 aaKnown RBP11.14□□□□□ -0.63
CNOT1-214ENST00000568917 IMMTQ16891 758 aaKnown RBP11.14□□□□□ -0.63
CNOT1-214ENST00000568917 ADCK5Q3MIX3 580 aa11.14□□□□□ -0.63
CNOT1-214ENST00000568917 SP8Q8IXZ3 490 aa11.14□□□□□ -0.63
CNOT1-214ENST00000568917 FBXL16Q8N461 479 aa11.14□□□□□ -0.63
CNOT1-214ENST00000568917 CCDC24Q8N4L8 307 aa11.14□□□□□ -0.63
CNOT1-214ENST00000568917 AIDAQ96BJ3 306 aa11.14□□□□□ -0.63
CNOT1-214ENST00000568917 NEK1Q96PY6 1258 aa11.14□□□□□ -0.63
CNOT1-214ENST00000568917 PUS7LQ9H0K6 701 aaKnown RBP11.14□□□□□ -0.63
CNOT1-214ENST00000568917 ANKIB1Q9P2G1 1089 aa11.14□□□□□ -0.63
CNOT1-214ENST00000568917 LRP2BPQ9P2M1 347 aa11.14□□□□□ -0.63
CNOT1-214ENST00000568917 WDR19Q8NEZ3 1342 aa11.14□□□□□ -0.63
CNOT1-214ENST00000568917 CACNA1SQ13698 1873 aa11.14□□□□□ -0.63
CNOT1-214ENST00000568917 MMP10P09238 476 aa11.13□□□□□ -0.63
CNOT1-214ENST00000568917 GYG1P46976 350 aa11.13□□□□□ -0.63
CNOT1-214ENST00000568917 AK2P54819 239 aa11.13□□□□□ -0.63
CNOT1-214ENST00000568917 EN1Q05925 392 aaPredicted RBP11.13□□□□□ -0.63
CNOT1-214ENST00000568917 SPTY2D1Q68D10 685 aaPredicted RBP11.13□□□□□ -0.63
CNOT1-214ENST00000568917 ZNF804AQ7Z570 1209 aa11.13□□□□□ -0.63
CNOT1-214ENST00000568917 WDR66Q8TBY9 1149 aa11.13□□□□□ -0.63
CNOT1-214ENST00000568917 SLC16A10Q8TF71 515 aa11.13□□□□□ -0.63
CNOT1-214ENST00000568917 CHMP4CQ96CF2 233 aa11.13□□□□□ -0.63
CNOT1-214ENST00000568917 MASTLQ96GX5 879 aa11.13□□□□□ -0.63
CNOT1-214ENST00000568917 STRBPQ96SI9 672 aaKnown RBP11.13□□□□□ -0.63
CNOT1-214ENST00000568917 GGA1Q9UJY5 639 aa11.13□□□□□ -0.63
CNOT1-214ENST00000568917 ATP6V0A2Q9Y487 856 aa11.13□□□□□ -0.63
CNOT1-214ENST00000568917 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.13□□□□□ -0.63
CNOT1-214ENST00000568917 COL1A1P02452 1464 aaPredicted RBP11.13□□□□□ -0.63
CNOT1-214ENST00000568917 PATL2C9JE40 543 aaKnown RBP11.12□□□□□ -0.63
CNOT1-214ENST00000568917 ARHGAP33O14559 1287 aa11.12□□□□□ -0.63
CNOT1-214ENST00000568917 PPEF1O14829 653 aaPredicted RBP11.12□□□□□ -0.63
CNOT1-214ENST00000568917 CHGBP05060 677 aa11.12□□□□□ -0.63
CNOT1-214ENST00000568917 RAB3GAP1Q15042 981 aa11.12□□□□□ -0.63
CNOT1-214ENST00000568917 STYK1Q6J9G0 422 aa11.12□□□□□ -0.63
CNOT1-214ENST00000568917 CLEC17AQ6ZS10 378 aa11.12□□□□□ -0.63
CNOT1-214ENST00000568917 DHX32Q7L7V1 743 aaKnown RBP11.12□□□□□ -0.63
CNOT1-214ENST00000568917 CERS3Q8IU89 383 aa11.12□□□□□ -0.63
CNOT1-214ENST00000568917 MAGEB6Q8N7X4 407 aa11.12□□□□□ -0.63
CNOT1-214ENST00000568917 TDRD7Q8NHU6 1098 aaKnown RBP11.12□□□□□ -0.63
CNOT1-214ENST00000568917 ZDHHC16Q969W1 377 aa11.12□□□□□ -0.63
CNOT1-214ENST00000568917 AGXT2Q9BYV1 514 aa11.12□□□□□ -0.63
CNOT1-214ENST00000568917 ADAM33Q9BZ11 813 aa11.12□□□□□ -0.63
CNOT1-214ENST00000568917 WWC3Q9ULE0 1092 aa11.12□□□□□ -0.63
CNOT1-214ENST00000568917 COL11A2P13942 1736 aaPredicted RBP11.12□□□□□ -0.63
CNOT1-214ENST00000568917 FOXP2O15409 715 aa11.11□□□□□ -0.63
CNOT1-214ENST00000568917 FRAT2O75474 233 aaPredicted RBP11.11□□□□□ -0.63
CNOT1-214ENST00000568917 FGAP02671 866 aa11.11□□□□□ -0.63
CNOT1-214ENST00000568917 IL1R1P14778 569 aa11.11□□□□□ -0.63
CNOT1-214ENST00000568917 PTMSP20962 102 aa11.11□□□□□ -0.63
CNOT1-214ENST00000568917 PSEN2P49810 448 aa11.11□□□□□ -0.63
CNOT1-214ENST00000568917 GIMAP6Q6P9H5 292 aa11.11□□□□□ -0.63
CNOT1-214ENST00000568917 SPNS2Q8IVW8 549 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms