RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 RNF113AO15541 343 aaKnown RBP20.24■□□□□ 0.83
COMMD4-224ENST00000568877 ZFYP08048 801 aaPredicted RBP20.24■□□□□ 0.83
COMMD4-224ENST00000568877 ANGEL2Q5VTE6 544 aaKnown RBP20.24■□□□□ 0.83
COMMD4-224ENST00000568877 NOL10Q9BSC4 688 aaKnown RBP20.24■□□□□ 0.83
COMMD4-224ENST00000568877 GGA3Q9NZ52 723 aa20.24■□□□□ 0.83
COMMD4-224ENST00000568877 CLRN2A0PK11 232 aa20.23■□□□□ 0.83
COMMD4-224ENST00000568877 BAG3O95817 575 aa20.23■□□□□ 0.83
COMMD4-224ENST00000568877 CHGBP05060 677 aa20.23■□□□□ 0.83
COMMD4-224ENST00000568877 PPP4CP60510 307 aa20.23■□□□□ 0.83
COMMD4-224ENST00000568877 SPDYE2Q495Y8 402 aa20.23■□□□□ 0.83
COMMD4-224ENST00000568877 SLFNL1Q499Z3 407 aa20.23■□□□□ 0.83
COMMD4-224ENST00000568877 CDC42EP5Q6NZY7 148 aa20.23■□□□□ 0.83
COMMD4-224ENST00000568877 TICAM2Q86XR7 235 aa20.23■□□□□ 0.83
COMMD4-224ENST00000568877 DCPSQ96C86 337 aaKnown RBP20.23■□□□□ 0.83
COMMD4-224ENST00000568877 USP40Q9NVE5 1235 aa20.23■□□□□ 0.83
COMMD4-224ENST00000568877 ZNF70Q9UC06 446 aaPredicted RBP20.23■□□□□ 0.83
COMMD4-224ENST00000568877 MYH2Q9UKX2 1941 aa20.22■□□□□ 0.83
COMMD4-224ENST00000568877 TOMM70O94826 608 aa20.22■□□□□ 0.83
COMMD4-224ENST00000568877 SDSP20132 328 aa20.22■□□□□ 0.83
COMMD4-224ENST00000568877 CHADLQ6NUI6 762 aa20.22■□□□□ 0.83
COMMD4-224ENST00000568877 MIGA1Q8NAN2 632 aa20.22■□□□□ 0.83
COMMD4-224ENST00000568877 AATFQ9NY61 560 aaKnown RBP eCLIP20.22■□□□□ 0.83
COMMD4-224ENST00000568877 PITPNM2Q9BZ72 1349 aa20.22■□□□□ 0.83
COMMD4-224ENST00000568877 MAP1SQ66K74 1059 aaPredicted RBP20.21■□□□□ 0.83
COMMD4-224ENST00000568877 VEZTQ9HBM0 779 aa20.21■□□□□ 0.83
COMMD4-224ENST00000568877 TMOD2Q9NZR1 351 aa20.21■□□□□ 0.83
COMMD4-224ENST00000568877 MAGEB6P1A0A0J9YX57 407 aa20.2■□□□□ 0.82
COMMD4-224ENST00000568877 PLCG2P16885 1265 aa20.2■□□□□ 0.82
COMMD4-224ENST00000568877 RHBDL3P58872 404 aa20.2■□□□□ 0.82
COMMD4-224ENST00000568877 DYNLL1P63167 89 aaKnown RBP20.2■□□□□ 0.82
COMMD4-224ENST00000568877 CERS3Q8IU89 383 aa20.2■□□□□ 0.82
COMMD4-224ENST00000568877 APOBEC3FQ8IUX4 373 aaKnown RBP20.2■□□□□ 0.82
COMMD4-224ENST00000568877 RBM46Q8TBY0 533 aaKnown RBP20.2■□□□□ 0.82
COMMD4-224ENST00000568877 APPBP2Q92624 585 aa20.2■□□□□ 0.82
COMMD4-224ENST00000568877 RFX7Q2KHR2 1363 aa20.2■□□□□ 0.82
COMMD4-224ENST00000568877 CACNB3P54284 484 aa20.19■□□□□ 0.82
COMMD4-224ENST00000568877 BMP2KLQ5H9B9 411 aa20.19■□□□□ 0.82
COMMD4-224ENST00000568877 FKBP1CQ5VVH2 108 aa20.19■□□□□ 0.82
COMMD4-224ENST00000568877 CDC37L1Q7L3B6 337 aa20.19■□□□□ 0.82
COMMD4-224ENST00000568877 SH3RF3Q8TEJ3 882 aaPredicted RBP20.19■□□□□ 0.82
COMMD4-224ENST00000568877 RIOK1Q9BRS2 568 aaKnown RBP20.19■□□□□ 0.82
COMMD4-224ENST00000568877 PUS7LQ9H0K6 701 aaKnown RBP20.19■□□□□ 0.82
COMMD4-224ENST00000568877 ZMYM1Q5SVZ6 1142 aa20.18■□□□□ 0.82
COMMD4-224ENST00000568877 KRT26Q7Z3Y9 468 aa20.18■□□□□ 0.82
COMMD4-224ENST00000568877 SULF1Q8IWU6 871 aa20.18■□□□□ 0.82
COMMD4-224ENST00000568877 SMC1BQ8NDV3 1235 aa20.18■□□□□ 0.82
COMMD4-224ENST00000568877 OSBP2Q969R2 916 aa20.18■□□□□ 0.82
COMMD4-224ENST00000568877 SCAF8Q9UPN6 1271 aaKnown RBP20.18■□□□□ 0.82
COMMD4-224ENST00000568877 TCP10L2B9ZVM9 353 aa20.17■□□□□ 0.82
COMMD4-224ENST00000568877 HIP1O00291 1037 aa20.17■□□□□ 0.82
COMMD4-224ENST00000568877 MBD4O95243 580 aa20.17■□□□□ 0.82
COMMD4-224ENST00000568877 TNNI2P48788 182 aa20.17■□□□□ 0.82
COMMD4-224ENST00000568877 TNFAIP1Q13829 316 aa20.17■□□□□ 0.82
COMMD4-224ENST00000568877 USP48Q86UV5 1035 aa20.17■□□□□ 0.82
COMMD4-224ENST00000568877 TEX11Q8IYF3 940 aa20.17■□□□□ 0.82
COMMD4-224ENST00000568877 IDI2Q9BXS1 227 aa20.17■□□□□ 0.82
COMMD4-224ENST00000568877 ADM5C9JUS6 153 aa20.16■□□□□ 0.82
COMMD4-224ENST00000568877 WDHD1O75717 1129 aaPredicted RBP20.16■□□□□ 0.82
COMMD4-224ENST00000568877 NFIAQ12857 509 aa20.16■□□□□ 0.82
COMMD4-224ENST00000568877 LCORLQ8N3X6 602 aa20.16■□□□□ 0.82
COMMD4-224ENST00000568877 AIDAQ96BJ3 306 aa20.16■□□□□ 0.82
COMMD4-224ENST00000568877 SEC62Q99442 399 aaKnown RBP20.16■□□□□ 0.82
COMMD4-224ENST00000568877 GLIS2Q9BZE0 524 aaPredicted RBP20.16■□□□□ 0.82
COMMD4-224ENST00000568877 DEFB129Q9H1M3 183 aa20.16■□□□□ 0.82
COMMD4-224ENST00000568877 ARMT1Q9H993 441 aa20.16■□□□□ 0.82
COMMD4-224ENST00000568877 FAM198AQ9UFP1 575 aa20.16■□□□□ 0.82
COMMD4-224ENST00000568877 ECM29Q5VYK3 1845 aa20.16■□□□□ 0.82
COMMD4-224ENST00000568877 MYH7P12883 1935 aa20.15■□□□□ 0.82
COMMD4-224ENST00000568877 RASA3Q14644 834 aa20.15■□□□□ 0.82
COMMD4-224ENST00000568877 FAM83AQ86UY5 434 aa20.15■□□□□ 0.82
COMMD4-224ENST00000568877 FAM227BQ96M60 508 aa20.15■□□□□ 0.82
COMMD4-224ENST00000568877 HELLSQ9NRZ9 838 aa20.15■□□□□ 0.82
COMMD4-224ENST00000568877 DIAPH3Q9NSV4 1193 aa20.15■□□□□ 0.82
COMMD4-224ENST00000568877 CNTNAP1P78357 1384 aa20.14■□□□□ 0.81
COMMD4-224ENST00000568877 M0R2C6 588 aa20.14■□□□□ 0.81
COMMD4-224ENST00000568877 NPM3O75607 178 aaKnown RBP20.14■□□□□ 0.81
COMMD4-224ENST00000568877 ITGBL1O95965 494 aaPredicted RBP20.14■□□□□ 0.81
COMMD4-224ENST00000568877 FSTL1Q12841 308 aa20.14■□□□□ 0.81
COMMD4-224ENST00000568877 NMIQ13287 307 aaPredicted RBP20.14■□□□□ 0.81
COMMD4-224ENST00000568877 PICALMQ13492 652 aa20.14■□□□□ 0.81
COMMD4-224ENST00000568877 STRBPQ96SI9 672 aaKnown RBP20.14■□□□□ 0.81
COMMD4-224ENST00000568877 CRNKL1Q9BZJ0 848 aaKnown RBP20.14■□□□□ 0.81
COMMD4-224ENST00000568877 DDX4Q9NQI0 724 aaKnown RBP20.14■□□□□ 0.81
COMMD4-224ENST00000568877 PPP2R3BQ9Y5P8 575 aa20.14■□□□□ 0.81
COMMD4-224ENST00000568877 A0A0D9SFI3 127 aa20.13■□□□□ 0.81
COMMD4-224ENST00000568877 ENTPD3O75355 529 aa20.13■□□□□ 0.81
COMMD4-224ENST00000568877 TCP10Q12799 353 aa20.13■□□□□ 0.81
COMMD4-224ENST00000568877 MCMDC2Q4G0Z9 681 aa20.13■□□□□ 0.81
COMMD4-224ENST00000568877 CWC27Q6UX04 472 aaKnown RBP20.13■□□□□ 0.81
COMMD4-224ENST00000568877 DLK2Q6UY11 383 aa20.13■□□□□ 0.81
COMMD4-224ENST00000568877 TGFBRAP1Q8WUH2 860 aa20.13■□□□□ 0.81
COMMD4-224ENST00000568877 FAM151AQ8WW52 585 aa20.13■□□□□ 0.81
COMMD4-224ENST00000568877 TRAF5O00463 557 aa20.12■□□□□ 0.81
COMMD4-224ENST00000568877 GPAA1O43292 621 aa20.12■□□□□ 0.81
COMMD4-224ENST00000568877 CHMLP26374 656 aa20.12■□□□□ 0.81
COMMD4-224ENST00000568877 USP5P45974 858 aa20.12■□□□□ 0.81
COMMD4-224ENST00000568877 ZFPM1Q8IX07 1006 aa20.12■□□□□ 0.81
COMMD4-224ENST00000568877 TMEM39BQ9GZU3 492 aa20.12■□□□□ 0.81
COMMD4-224ENST00000568877 PRAMEF18Q5VWM3 479 aa20.11■□□□□ 0.81
COMMD4-224ENST00000568877 MAPKAPK5Q8IW41 473 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms