RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 C4BP0C0L5 1744 aa9.83□□□□□ -0.84
SMG1-214ENST00000568038 COL5A3P25940 1745 aaPredicted RBP9.83□□□□□ -0.84
SMG1-214ENST00000568038 PLIN1O60240 522 aa9.83□□□□□ -0.84
SMG1-214ENST00000568038 IL6STP40189 918 aaPredicted RBP9.83□□□□□ -0.84
SMG1-214ENST00000568038 EIF5P55010 431 aaKnown RBP9.83□□□□□ -0.84
SMG1-214ENST00000568038 FKBP5Q13451 457 aaPredicted RBP9.83□□□□□ -0.84
SMG1-214ENST00000568038 ZNF827Q17R98 1081 aa9.83□□□□□ -0.84
SMG1-214ENST00000568038 FOXR1Q6PIV2 292 aa9.83□□□□□ -0.84
SMG1-214ENST00000568038 TTLL7Q6ZT98 887 aa9.83□□□□□ -0.84
SMG1-214ENST00000568038 LRP10Q7Z4F1 713 aa9.83□□□□□ -0.84
SMG1-214ENST00000568038 AMIGO3Q86WK7 504 aa9.83□□□□□ -0.84
SMG1-214ENST00000568038 TRIM22Q8IYM9 498 aa9.83□□□□□ -0.84
SMG1-214ENST00000568038 ZSCAN10Q96SZ4 725 aaPredicted RBP9.83□□□□□ -0.84
SMG1-214ENST00000568038 RGPD3A6NKT7 1758 aaPredicted RBP9.83□□□□□ -0.84
SMG1-214ENST00000568038 RGPD4Q7Z3J3 1758 aa9.83□□□□□ -0.84
SMG1-214ENST00000568038 KIF16BQ96L93 1317 aa9.82□□□□□ -0.84
SMG1-214ENST00000568038 IPO8O15397 1037 aaKnown RBP9.82□□□□□ -0.84
SMG1-214ENST00000568038 GTF2E1P29083 439 aaPredicted RBP9.82□□□□□ -0.84
SMG1-214ENST00000568038 TMEM214Q6NUQ4 689 aaKnown RBP9.82□□□□□ -0.84
SMG1-214ENST00000568038 GTPBP3Q969Y2 492 aaKnown RBP9.82□□□□□ -0.84
SMG1-214ENST00000568038 STK32BQ9NY57 414 aa9.82□□□□□ -0.84
SMG1-214ENST00000568038 COL15A1P39059 1388 aa9.81□□□□□ -0.84
SMG1-214ENST00000568038 A0A087WZG4 1122 aa9.81□□□□□ -0.84
SMG1-214ENST00000568038 SPATA31C2B4DYI2 1134 aa9.81□□□□□ -0.84
SMG1-214ENST00000568038 F6X3S4 739 aa9.81□□□□□ -0.84
SMG1-214ENST00000568038 DDX58O95786 925 aaKnown RBP9.81□□□□□ -0.84
SMG1-214ENST00000568038 SLC15A2Q16348 729 aa9.81□□□□□ -0.84
SMG1-214ENST00000568038 TRAPPC3LQ5T215 181 aa9.81□□□□□ -0.84
SMG1-214ENST00000568038 ZKSCAN2Q63HK3 967 aa9.81□□□□□ -0.84
SMG1-214ENST00000568038 ZNF385CQ66K41 422 aaPredicted RBP9.81□□□□□ -0.84
SMG1-214ENST00000568038 KIF6Q6ZMV9 814 aa9.81□□□□□ -0.84
SMG1-214ENST00000568038 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.81□□□□□ -0.84
SMG1-214ENST00000568038 CLUAP1Q96AJ1 413 aa9.81□□□□□ -0.84
SMG1-214ENST00000568038 XAGE2Q96GT9 111 aa9.81□□□□□ -0.84
SMG1-214ENST00000568038 GPAMQ9HCL2 828 aa9.81□□□□□ -0.84
SMG1-214ENST00000568038 TNNQ9UQP3 1299 aa9.81□□□□□ -0.84
SMG1-214ENST00000568038 PTPRCP08575 1304 aa9.81□□□□□ -0.84
SMG1-214ENST00000568038 PI4KAP2A4QPH2 592 aa9.8□□□□□ -0.84
SMG1-214ENST00000568038 H7C1W4 665 aa9.8□□□□□ -0.84
SMG1-214ENST00000568038 SSFA2P28290 1259 aa9.8□□□□□ -0.84
SMG1-214ENST00000568038 RFC4P35249 363 aa9.8□□□□□ -0.84
SMG1-214ENST00000568038 RRP1P56182 461 aaKnown RBP9.8□□□□□ -0.84
SMG1-214ENST00000568038 GAS6Q14393 721 aa9.8□□□□□ -0.84
SMG1-214ENST00000568038 SLC4A10Q6U841 1118 aa9.8□□□□□ -0.84
SMG1-214ENST00000568038 KSR2Q6VAB6 950 aa9.8□□□□□ -0.84
SMG1-214ENST00000568038 ATF7IPQ6VMQ6 1270 aa9.8□□□□□ -0.84
SMG1-214ENST00000568038 PI4KAP1Q8N8J0 262 aa9.8□□□□□ -0.84
SMG1-214ENST00000568038 PLBD2Q8NHP8 589 aa9.8□□□□□ -0.84
SMG1-214ENST00000568038 API5Q9BZZ5 524 aaKnown RBP9.8□□□□□ -0.84
SMG1-214ENST00000568038 SRP68Q9UHB9 627 aaKnown RBP9.8□□□□□ -0.84
SMG1-214ENST00000568038 MAP3K2Q9Y2U5 619 aa9.8□□□□□ -0.84
SMG1-214ENST00000568038 COG6Q9Y2V7 657 aa9.8□□□□□ -0.84
SMG1-214ENST00000568038 CACNA1FO60840 1977 aa9.8□□□□□ -0.84
SMG1-214ENST00000568038 RREB1Q92766 1687 aa9.8□□□□□ -0.84
SMG1-214ENST00000568038 MAP3K15Q6ZN16 1313 aa9.8□□□□□ -0.84
SMG1-214ENST00000568038 EP400Q96L91 3159 aa9.79□□□□□ -0.84
SMG1-214ENST00000568038 NUP188Q5SRE5 1749 aa9.79□□□□□ -0.84
SMG1-214ENST00000568038 CAMTA2O94983 1202 aa9.79□□□□□ -0.84
SMG1-214ENST00000568038 SLURP2P0DP57 97 aa9.79□□□□□ -0.84
SMG1-214ENST00000568038 TRIM27P14373 513 aa9.79□□□□□ -0.84
SMG1-214ENST00000568038 HLFQ16534 295 aa9.79□□□□□ -0.84
SMG1-214ENST00000568038 COL23A1Q86Y22 540 aaPredicted RBP9.79□□□□□ -0.84
SMG1-214ENST00000568038 DNAAF4Q8WXU2 420 aa9.79□□□□□ -0.84
SMG1-214ENST00000568038 ARHGAP45Q92619 1136 aa9.79□□□□□ -0.84
SMG1-214ENST00000568038 GMCL1Q96IK5 515 aa9.79□□□□□ -0.84
SMG1-214ENST00000568038 ETNK1Q9HBU6 452 aa9.79□□□□□ -0.84
SMG1-214ENST00000568038 PNPLA7Q6ZV29 1317 aa9.79□□□□□ -0.84
SMG1-214ENST00000568038 ADCY9O60503 1353 aa9.78□□□□□ -0.84
SMG1-214ENST00000568038 F11P03951 625 aa9.78□□□□□ -0.84
SMG1-214ENST00000568038 RLBP1P12271 317 aa9.78□□□□□ -0.84
SMG1-214ENST00000568038 WDR44Q5JSH3 913 aa9.78□□□□□ -0.84
SMG1-214ENST00000568038 GNASQ5JWF2 1037 aa9.78□□□□□ -0.84
SMG1-214ENST00000568038 C20orf194Q5TEA3 1177 aa9.78□□□□□ -0.84
SMG1-214ENST00000568038 USPL1Q5W0Q7 1092 aa9.78□□□□□ -0.84
SMG1-214ENST00000568038 FTSJ3Q8IY81 847 aaKnown RBP9.78□□□□□ -0.84
SMG1-214ENST00000568038 DZIP1LQ8IYY4 767 aaKnown RBP9.78□□□□□ -0.84
SMG1-214ENST00000568038 PLPP7Q8NBV4 271 aa9.78□□□□□ -0.84
SMG1-214ENST00000568038 FLAD1Q8NFF5 587 aa9.78□□□□□ -0.84
SMG1-214ENST00000568038 PANK1Q8TE04 598 aa9.78□□□□□ -0.84
SMG1-214ENST00000568038 MYD88Q99836 296 aa9.78□□□□□ -0.84
SMG1-214ENST00000568038 NARFQ9UHQ1 456 aa9.78□□□□□ -0.84
SMG1-214ENST00000568038 UBR3Q6ZT12 1888 aa9.78□□□□□ -0.84
SMG1-214ENST00000568038 ERVV-1B6SEH8 477 aa9.77□□□□□ -0.85
SMG1-214ENST00000568038 IRX6P78412 446 aaPredicted RBP9.77□□□□□ -0.85
SMG1-214ENST00000568038 SRSF11Q05519 484 aaKnown RBP9.77□□□□□ -0.85
SMG1-214ENST00000568038 R3HDM1Q15032 1099 aaKnown RBP9.77□□□□□ -0.85
SMG1-214ENST00000568038 LYPD4Q6UWN0 246 aa9.77□□□□□ -0.85
SMG1-214ENST00000568038 POM121Q96HA1 1249 aa9.77□□□□□ -0.85
SMG1-214ENST00000568038 TRERF1Q96PN7 1200 aa9.77□□□□□ -0.85
SMG1-214ENST00000568038 METTL22Q9BUU2 404 aaPredicted RBP9.77□□□□□ -0.85
SMG1-214ENST00000568038 NUCKS1Q9H1E3 243 aaKnown RBP9.77□□□□□ -0.85
SMG1-214ENST00000568038 RNF123Q5XPI4 1314 aa9.77□□□□□ -0.85
SMG1-214ENST00000568038 USP42Q9H9J4 1324 aaKnown RBP9.77□□□□□ -0.85
SMG1-214ENST00000568038 GPTP24298 496 aa9.76□□□□□ -0.85
SMG1-214ENST00000568038 NEXNQ0ZGT2 675 aa9.76□□□□□ -0.85
SMG1-214ENST00000568038 TCIRG1Q13488 830 aa9.76□□□□□ -0.85
SMG1-214ENST00000568038 TLR1Q15399 786 aa9.76□□□□□ -0.85
SMG1-214ENST00000568038 BICDL1Q6ZP65 573 aa9.76□□□□□ -0.85
SMG1-214ENST00000568038 TMEM57Q8N5G2 664 aa9.76□□□□□ -0.85
SMG1-214ENST00000568038 FHDC1Q9C0D6 1143 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms