RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 TRIM37O94972 964 aa8□□□□□ -1.13
SHCBP1-206ENST00000567698 KCNMA1Q12791 1236 aa8□□□□□ -1.13
SHCBP1-206ENST00000567698 CAMK2GQ13555 558 aaPredicted RBP8□□□□□ -1.13
SHCBP1-206ENST00000567698 DUOXA2Q1HG44 320 aa8□□□□□ -1.13
SHCBP1-206ENST00000567698 USP48Q86UV5 1035 aa8□□□□□ -1.13
SHCBP1-206ENST00000567698 ALYREFQ86V81 257 aaKnown RBP8□□□□□ -1.13
SHCBP1-206ENST00000567698 AGGF1Q8N302 714 aaeCLIP8□□□□□ -1.13
SHCBP1-206ENST00000567698 GPBAR1Q8TDU6 330 aa8□□□□□ -1.13
SHCBP1-206ENST00000567698 DCAF11Q8TEB1 546 aa8□□□□□ -1.13
SHCBP1-206ENST00000567698 CORO1BQ9BR76 489 aa8□□□□□ -1.13
SHCBP1-206ENST00000567698 WDR18Q9BV38 432 aa8□□□□□ -1.13
SHCBP1-206ENST00000567698 EMILIN2Q9BXX0 1053 aa8□□□□□ -1.13
SHCBP1-206ENST00000567698 GREM1O60565 184 aa7.99□□□□□ -1.13
SHCBP1-206ENST00000567698 GBP2P32456 591 aaPredicted RBP7.99□□□□□ -1.13
SHCBP1-206ENST00000567698 CHRNA4P43681 627 aa7.99□□□□□ -1.13
SHCBP1-206ENST00000567698 SEPT6Q14141 434 aa7.99□□□□□ -1.13
SHCBP1-206ENST00000567698 ADGRE1Q14246 886 aa7.99□□□□□ -1.13
SHCBP1-206ENST00000567698 KIF4BQ2VIQ3 1234 aa7.99□□□□□ -1.13
SHCBP1-206ENST00000567698 MAP1SQ66K74 1059 aaPredicted RBP7.99□□□□□ -1.13
SHCBP1-206ENST00000567698 SCARA3Q6AZY7 606 aa7.99□□□□□ -1.13
SHCBP1-206ENST00000567698 FBXL19Q6PCT2 694 aa7.99□□□□□ -1.13
SHCBP1-206ENST00000567698 ACAD11Q709F0 780 aa7.99□□□□□ -1.13
SHCBP1-206ENST00000567698 RELL1Q8IUW5 271 aa7.99□□□□□ -1.13
SHCBP1-206ENST00000567698 TRIM42Q8IWZ5 723 aa7.99□□□□□ -1.13
SHCBP1-206ENST00000567698 TGIF2Q9GZN2 237 aa7.99□□□□□ -1.13
SHCBP1-206ENST00000567698 SAMM50Q9Y512 469 aa7.99□□□□□ -1.13
SHCBP1-206ENST00000567698 FAM221AA4D161 298 aa7.98□□□□□ -1.13
SHCBP1-206ENST00000567698 MINDY4BA8MYZ0 360 aa7.98□□□□□ -1.13
SHCBP1-206ENST00000567698 ALX3O95076 343 aa7.98□□□□□ -1.13
SHCBP1-206ENST00000567698 TIAF1O95411 115 aa7.98□□□□□ -1.13
SHCBP1-206ENST00000567698 LIG1P18858 919 aa7.98□□□□□ -1.13
SHCBP1-206ENST00000567698 CDK8P49336 464 aa7.98□□□□□ -1.13
SHCBP1-206ENST00000567698 FAM160A1Q05DH4 1040 aa7.98□□□□□ -1.13
SHCBP1-206ENST00000567698 PWP1Q13610 501 aa7.98□□□□□ -1.13
SHCBP1-206ENST00000567698 MBTPS1Q14703 1052 aa7.98□□□□□ -1.13
SHCBP1-206ENST00000567698 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.98□□□□□ -1.13
SHCBP1-206ENST00000567698 BNC2Q6ZN30 1099 aaPredicted RBP7.98□□□□□ -1.13
SHCBP1-206ENST00000567698 KCNB2Q92953 911 aa7.98□□□□□ -1.13
SHCBP1-206ENST00000567698 CBX8Q9HC52 389 aa7.98□□□□□ -1.13
SHCBP1-206ENST00000567698 SYNGAP1Q96PV0 1343 aa7.98□□□□□ -1.13
SHCBP1-206ENST00000567698 ERCC5P28715 1186 aaPredicted RBP7.97□□□□□ -1.13
SHCBP1-206ENST00000567698 NOS3P29474 1203 aa7.97□□□□□ -1.13
SHCBP1-206ENST00000567698 EIF4A3P38919 411 aaKnown RBP7.97□□□□□ -1.13
SHCBP1-206ENST00000567698 LRRC14Q15048 493 aa7.97□□□□□ -1.13
SHCBP1-206ENST00000567698 EXOSC6Q5RKV6 272 aaKnown RBP7.97□□□□□ -1.13
SHCBP1-206ENST00000567698 CD163Q86VB7 1156 aa7.97□□□□□ -1.13
SHCBP1-206ENST00000567698 SMG8Q8ND04 991 aaKnown RBP7.97□□□□□ -1.13
SHCBP1-206ENST00000567698 RUSC1Q9BVN2 902 aa7.97□□□□□ -1.13
SHCBP1-206ENST00000567698 ACBD3Q9H3P7 528 aa7.97□□□□□ -1.13
SHCBP1-206ENST00000567698 SUGCTQ9HAC7 445 aa7.97□□□□□ -1.13
SHCBP1-206ENST00000567698 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.97□□□□□ -1.13
SHCBP1-206ENST00000567698 C9orf172C9J069 976 aa7.96□□□□□ -1.14
SHCBP1-206ENST00000567698 RNF225M0QZC1 329 aaPredicted RBP7.96□□□□□ -1.14
SHCBP1-206ENST00000567698 AOC2O75106 756 aa7.96□□□□□ -1.14
SHCBP1-206ENST00000567698 F13A1P00488 732 aa7.96□□□□□ -1.14
SHCBP1-206ENST00000567698 CRKP46108 304 aa7.96□□□□□ -1.14
SHCBP1-206ENST00000567698 RASSF7Q02833 373 aa7.96□□□□□ -1.14
SHCBP1-206ENST00000567698 CCDC84Q86UT8 332 aaPredicted RBP7.96□□□□□ -1.14
SHCBP1-206ENST00000567698 ZNF296Q8WUU4 475 aaPredicted RBP7.96□□□□□ -1.14
SHCBP1-206ENST00000567698 EAF1Q96JC9 268 aaPredicted RBP7.96□□□□□ -1.14
SHCBP1-206ENST00000567698 RNF208Q9H0X6 261 aa7.96□□□□□ -1.14
SHCBP1-206ENST00000567698 PPP1R9AQ9ULJ8 1098 aa7.96□□□□□ -1.14
SHCBP1-206ENST00000567698 CILPO75339 1184 aa7.95□□□□□ -1.14
SHCBP1-206ENST00000567698 TNNI2P48788 182 aa7.95□□□□□ -1.14
SHCBP1-206ENST00000567698 RING1Q06587 406 aa7.95□□□□□ -1.14
SHCBP1-206ENST00000567698 INPP5AQ14642 412 aa7.95□□□□□ -1.14
SHCBP1-206ENST00000567698 ZC3H12AQ5D1E8 599 aaKnown RBP7.95□□□□□ -1.14
SHCBP1-206ENST00000567698 ZNF654Q8IZM8 581 aa7.95□□□□□ -1.14
SHCBP1-206ENST00000567698 FBXO27Q8NI29 283 aa7.95□□□□□ -1.14
SHCBP1-206ENST00000567698 WFDC12Q8WWY7 111 aa7.95□□□□□ -1.14
SHCBP1-206ENST00000567698 TINF2Q9BSI4 451 aa7.95□□□□□ -1.14
SHCBP1-206ENST00000567698 SSBP4Q9BWG4 385 aaPredicted RBP7.95□□□□□ -1.14
SHCBP1-206ENST00000567698 LRRC3Q9BY71 257 aa7.95□□□□□ -1.14
SHCBP1-206ENST00000567698 GSX1Q9H4S2 264 aaPredicted RBP7.95□□□□□ -1.14
SHCBP1-206ENST00000567698 AKTIPQ9H8T0 292 aa7.95□□□□□ -1.14
SHCBP1-206ENST00000567698 C1QTNF9BB2RNN3 333 aa7.94□□□□□ -1.14
SHCBP1-206ENST00000567698 GFRA2O00451 464 aa7.94□□□□□ -1.14
SHCBP1-206ENST00000567698 TMPRSS2O15393 492 aa7.94□□□□□ -1.14
SHCBP1-206ENST00000567698 PDE3AQ14432 1141 aa7.94□□□□□ -1.14
SHCBP1-206ENST00000567698 FAM196AQ6ZSG2 479 aa7.94□□□□□ -1.14
SHCBP1-206ENST00000567698 GOLM1Q8NBJ4 401 aa7.94□□□□□ -1.14
SHCBP1-206ENST00000567698 GATAD2BQ8WXI9 593 aa7.94□□□□□ -1.14
SHCBP1-206ENST00000567698 MEGF10Q96KG7 1140 aa7.94□□□□□ -1.14
SHCBP1-206ENST00000567698 NACC1Q96RE7 527 aa7.94□□□□□ -1.14
SHCBP1-206ENST00000567698 UBL7Q96S82 380 aaPredicted RBP7.94□□□□□ -1.14
SHCBP1-206ENST00000567698 MIR1-1HGQ9H1L0 117 aa7.94□□□□□ -1.14
SHCBP1-206ENST00000567698 APBA3O96018 575 aa7.93□□□□□ -1.14
SHCBP1-206ENST00000567698 ADH5P11766 374 aa7.93□□□□□ -1.14
SHCBP1-206ENST00000567698 DRD2P14416 443 aa7.93□□□□□ -1.14
SHCBP1-206ENST00000567698 NTF4P34130 210 aa7.93□□□□□ -1.14
SHCBP1-206ENST00000567698 PREPP48147 710 aa7.93□□□□□ -1.14
SHCBP1-206ENST00000567698 GJA8P48165 433 aa7.93□□□□□ -1.14
SHCBP1-206ENST00000567698 IREB2P48200 963 aaKnown RBP7.93□□□□□ -1.14
SHCBP1-206ENST00000567698 NRG1Q02297 640 aaPredicted RBP7.93□□□□□ -1.14
SHCBP1-206ENST00000567698 LRFN4Q6PJG9 635 aa7.93□□□□□ -1.14
SHCBP1-206ENST00000567698 DZIP1LQ8IYY4 767 aaKnown RBP7.93□□□□□ -1.14
SHCBP1-206ENST00000567698 FAM46AQ96IP4 442 aaKnown RBP7.93□□□□□ -1.14
SHCBP1-206ENST00000567698 SPON2Q9BUD6 331 aa7.93□□□□□ -1.14
SHCBP1-206ENST00000567698 CRIM1Q9NZV1 1036 aa7.93□□□□□ -1.14
SHCBP1-206ENST00000567698 USP21Q9UK80 565 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms