RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 NOL10Q9BSC4 688 aaKnown RBP24.6■■□□□ 1.53
RNF40-210ENST00000566811 GGA3Q9NZ52 723 aa24.6■■□□□ 1.53
RNF40-210ENST00000566811 TMOD2Q9NZR1 351 aa24.6■■□□□ 1.53
RNF40-210ENST00000566811 DAGLAQ9Y4D2 1042 aa24.6■■□□□ 1.53
RNF40-210ENST00000566811 DIXDC1Q155Q3 683 aa24.59■■□□□ 1.53
RNF40-210ENST00000566811 NBPF9Q3BBW0 867 aa24.59■■□□□ 1.53
RNF40-210ENST00000566811 FKBP1CQ5VVH2 108 aa24.59■■□□□ 1.53
RNF40-210ENST00000566811 KBTBD3Q8NAB2 608 aa24.59■■□□□ 1.53
RNF40-210ENST00000566811 ANTXR1Q9H6X2 564 aa24.59■■□□□ 1.53
RNF40-210ENST00000566811 PPP2R3BQ9Y5P8 575 aa24.59■■□□□ 1.53
RNF40-210ENST00000566811 PLCG2P16885 1265 aa24.58■■□□□ 1.53
RNF40-210ENST00000566811 SPDYE2Q495Y8 402 aa24.58■■□□□ 1.53
RNF40-210ENST00000566811 TSHZ3Q63HK5 1081 aa24.58■■□□□ 1.53
RNF40-210ENST00000566811 SULF1Q8IWU6 871 aa24.58■■□□□ 1.53
RNF40-210ENST00000566811 PRMT6Q96LA8 375 aaPredicted RBP24.58■■□□□ 1.53
RNF40-210ENST00000566811 NDUFB9Q9Y6M9 179 aa24.58■■□□□ 1.53
RNF40-210ENST00000566811 CDK5RAP2Q96SN8 1893 aa24.58■■□□□ 1.52
RNF40-210ENST00000566811 GPR75-ASB3A0A0A6YYF3 556 aa24.57■■□□□ 1.52
RNF40-210ENST00000566811 BAG3O95817 575 aa24.57■■□□□ 1.52
RNF40-210ENST00000566811 ZFYP08048 801 aaPredicted RBP24.57■■□□□ 1.52
RNF40-210ENST00000566811 ANGEL2Q5VTE6 544 aaKnown RBP24.57■■□□□ 1.52
RNF40-210ENST00000566811 APOBEC3HQ6NTF7 200 aaKnown RBP24.57■■□□□ 1.52
RNF40-210ENST00000566811 CDC37L1Q7L3B6 337 aa24.57■■□□□ 1.52
RNF40-210ENST00000566811 SLC9C2Q5TAH2 1124 aa24.56■■□□□ 1.52
RNF40-210ENST00000566811 ZNF384Q8TF68 577 aa24.56■■□□□ 1.52
RNF40-210ENST00000566811 EVI5LQ96CN4 794 aa24.56■■□□□ 1.52
RNF40-210ENST00000566811 PASKQ96RG2 1323 aa24.56■■□□□ 1.52
RNF40-210ENST00000566811 PDE6AP16499 860 aa24.55■■□□□ 1.52
RNF40-210ENST00000566811 TNNI2P48788 182 aa24.55■■□□□ 1.52
RNF40-210ENST00000566811 CNTROBQ8N137 903 aa24.55■■□□□ 1.52
RNF40-210ENST00000566811 MAGEB6Q8N7X4 407 aa24.55■■□□□ 1.52
RNF40-210ENST00000566811 PDE4AP27815 886 aa24.54■■□□□ 1.52
RNF40-210ENST00000566811 BTDP43251 543 aa24.54■■□□□ 1.52
RNF40-210ENST00000566811 UBE3CQ15386 1083 aa24.54■■□□□ 1.52
RNF40-210ENST00000566811 KRT26Q7Z3Y9 468 aa24.54■■□□□ 1.52
RNF40-210ENST00000566811 ZNF70Q9UC06 446 aaPredicted RBP24.54■■□□□ 1.52
RNF40-210ENST00000566811 CNTNAP1P78357 1384 aa24.54■■□□□ 1.52
RNF40-210ENST00000566811 RPAP1Q9BWH6 1393 aaPredicted RBP24.54■■□□□ 1.52
RNF40-210ENST00000566811 FOXN1O15353 648 aa24.53■■□□□ 1.52
RNF40-210ENST00000566811 CYP7A1P22680 504 aa24.53■■□□□ 1.52
RNF40-210ENST00000566811 ADD2P35612 726 aa24.53■■□□□ 1.52
RNF40-210ENST00000566811 PPP4CP60510 307 aa24.53■■□□□ 1.52
RNF40-210ENST00000566811 EDC3Q96F86 508 aaKnown RBP24.53■■□□□ 1.52
RNF40-210ENST00000566811 MAP1SQ66K74 1059 aaPredicted RBP24.52■■□□□ 1.52
RNF40-210ENST00000566811 FAM83AQ86UY5 434 aa24.52■■□□□ 1.52
RNF40-210ENST00000566811 FSD1Q9BTV5 496 aa24.52■■□□□ 1.52
RNF40-210ENST00000566811 TDRD3Q9H7E2 651 aaKnown RBP24.52■■□□□ 1.52
RNF40-210ENST00000566811 COL2A1P02458 1487 aaPredicted RBP24.51■■□□□ 1.51
RNF40-210ENST00000566811 NPM3O75607 178 aaKnown RBP24.51■■□□□ 1.51
RNF40-210ENST00000566811 ITGBL1O95965 494 aaPredicted RBP24.51■■□□□ 1.51
RNF40-210ENST00000566811 IDI2Q9BXS1 227 aa24.51■■□□□ 1.51
RNF40-210ENST00000566811 VEZTQ9HBM0 779 aa24.51■■□□□ 1.51
RNF40-210ENST00000566811 PCDHAC2Q9Y5I4 1007 aa24.51■■□□□ 1.51
RNF40-210ENST00000566811 ZNF532Q9HCE3 1301 aa24.51■■□□□ 1.51
RNF40-210ENST00000566811 TCRBV5S4A2TA0A5A2 114 aa24.5■■□□□ 1.51
RNF40-210ENST00000566811 CLRN2A0PK11 232 aa24.5■■□□□ 1.51
RNF40-210ENST00000566811 CDC42EP5Q6NZY7 148 aa24.5■■□□□ 1.51
RNF40-210ENST00000566811 USP40Q9NVE5 1235 aa24.5■■□□□ 1.51
RNF40-210ENST00000566811 ASTN2O75129 1339 aaPredicted RBP24.5■■□□□ 1.51
RNF40-210ENST00000566811 NAV1Q8NEY1 1877 aa24.49■■□□□ 1.51
RNF40-210ENST00000566811 TRIM6-TRIM34B2RNG4 842 aa24.49■■□□□ 1.51
RNF40-210ENST00000566811 TTC22Q5TAA0 569 aa24.49■■□□□ 1.51
RNF40-210ENST00000566811 HOOK2Q96ED9 719 aa24.49■■□□□ 1.51
RNF40-210ENST00000566811 HIP1O00291 1037 aa24.48■■□□□ 1.51
RNF40-210ENST00000566811 RNF113AO15541 343 aaKnown RBP24.48■■□□□ 1.51
RNF40-210ENST00000566811 VEGFBP49765 207 aa24.48■■□□□ 1.51
RNF40-210ENST00000566811 RHBDL3P58872 404 aa24.48■■□□□ 1.51
RNF40-210ENST00000566811 APPBP2Q92624 585 aa24.48■■□□□ 1.51
RNF40-210ENST00000566811 DEFB129Q9H1M3 183 aa24.48■■□□□ 1.51
RNF40-210ENST00000566811 AATFQ9NY61 560 aaKnown RBP eCLIP24.48■■□□□ 1.51
RNF40-210ENST00000566811 PAPPA2Q9BXP8 1791 aa24.47■■□□□ 1.51
RNF40-210ENST00000566811 TMEM88BA6NKF7 163 aa24.47■■□□□ 1.51
RNF40-210ENST00000566811 ENTPD3O75355 529 aa24.47■■□□□ 1.51
RNF40-210ENST00000566811 NF2P35240 595 aa24.47■■□□□ 1.51
RNF40-210ENST00000566811 ADGRA1Q86SQ6 560 aa24.47■■□□□ 1.51
RNF40-210ENST00000566811 GLIS2Q9BZE0 524 aaPredicted RBP24.47■■□□□ 1.51
RNF40-210ENST00000566811 DDX60LQ5H9U9 1706 aaKnown RBP24.47■■□□□ 1.51
RNF40-210ENST00000566811 MYH1P12882 1939 aa24.46■■□□□ 1.51
RNF40-210ENST00000566811 MAGEB6P1A0A0J9YX57 407 aa24.46■■□□□ 1.51
RNF40-210ENST00000566811 USP48Q86UV5 1035 aa24.46■■□□□ 1.51
RNF40-210ENST00000566811 TEX11Q8IYF3 940 aa24.46■■□□□ 1.51
RNF40-210ENST00000566811 FAM151AQ8WW52 585 aa24.46■■□□□ 1.51
RNF40-210ENST00000566811 ADM5C9JUS6 153 aa24.45■■□□□ 1.5
RNF40-210ENST00000566811 RILPL2Q969X0 211 aa24.45■■□□□ 1.5
RNF40-210ENST00000566811 RIOK1Q9BRS2 568 aaKnown RBP24.45■■□□□ 1.5
RNF40-210ENST00000566811 PRDM10Q9NQV6 1147 aa24.45■■□□□ 1.5
RNF40-210ENST00000566811 WDHD1O75717 1129 aaPredicted RBP24.44■■□□□ 1.5
RNF40-210ENST00000566811 RASA3Q14644 834 aa24.44■■□□□ 1.5
RNF40-210ENST00000566811 SUPT20HL1Q3ZLR7 823 aa24.44■■□□□ 1.5
RNF40-210ENST00000566811 AIDAQ96BJ3 306 aa24.44■■□□□ 1.5
RNF40-210ENST00000566811 CDCA5Q96FF9 252 aa24.44■■□□□ 1.5
RNF40-210ENST00000566811 CRNKL1Q9BZJ0 848 aaKnown RBP24.44■■□□□ 1.5
RNF40-210ENST00000566811 ATRNL1Q5VV63 1379 aa24.43■■□□□ 1.5
RNF40-210ENST00000566811 TCP10L2B9ZVM9 353 aa24.43■■□□□ 1.5
RNF40-210ENST00000566811 FKBP1BP68106 108 aa24.43■■□□□ 1.5
RNF40-210ENST00000566811 MIGA1Q8NAN2 632 aa24.43■■□□□ 1.5
RNF40-210ENST00000566811 SH3RF3Q8TEJ3 882 aaPredicted RBP24.43■■□□□ 1.5
RNF40-210ENST00000566811 GSPT1P15170 499 aaKnown RBP24.42■■□□□ 1.5
RNF40-210ENST00000566811 GNAT2P19087 354 aa24.42■■□□□ 1.5
RNF40-210ENST00000566811 CTCFP49711 727 aaPredicted RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms