RNA–Protein interactions for RNA: ENST00000566215.5

UBE3A-205, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE3A, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-205ENST00000566215 FGFR2P21802 821 aa7.82□□□□□ -1.16
UBE3A-205ENST00000566215 WDR63Q8IWG1 891 aa7.82□□□□□ -1.16
UBE3A-205ENST00000566215 U2AF1L4Q8WU68 220 aaKnown RBP7.82□□□□□ -1.16
UBE3A-205ENST00000566215 USP6NLQ92738 828 aa7.82□□□□□ -1.16
UBE3A-205ENST00000566215 RPTORQ8N122 1335 aa7.82□□□□□ -1.16
UBE3A-205ENST00000566215 TCERG1O14776 1098 aaKnown RBP7.82□□□□□ -1.16
UBE3A-205ENST00000566215 SNX17Q15036 470 aa7.82□□□□□ -1.16
UBE3A-205ENST00000566215 CHRDL2Q6WN34 429 aa7.82□□□□□ -1.16
UBE3A-205ENST00000566215 LBX2Q6XYB7 198 aa7.82□□□□□ -1.16
UBE3A-205ENST00000566215 ZNF428Q96B54 188 aa7.82□□□□□ -1.16
UBE3A-205ENST00000566215 MPHOSPH8Q99549 860 aa7.82□□□□□ -1.16
UBE3A-205ENST00000566215 OSBPL5Q9H0X9 879 aaPredicted RBP7.82□□□□□ -1.16
UBE3A-205ENST00000566215 CTGFP29279 349 aa7.81□□□□□ -1.16
UBE3A-205ENST00000566215 SMAD3P84022 425 aaKnown RBP7.81□□□□□ -1.16
UBE3A-205ENST00000566215 SLC4A8Q2Y0W8 1093 aa7.81□□□□□ -1.16
UBE3A-205ENST00000566215 NECAB2Q7Z6G3 386 aa7.81□□□□□ -1.16
UBE3A-205ENST00000566215 TDHQ8IZJ6 230 aa7.81□□□□□ -1.16
UBE3A-205ENST00000566215 PNMA3Q9UL41 463 aa7.81□□□□□ -1.16
UBE3A-205ENST00000566215 AFG3L2Q9Y4W6 797 aa7.81□□□□□ -1.16
UBE3A-205ENST00000566215 PHF20L1A8MW92 1017 aa7.81□□□□□ -1.16
UBE3A-205ENST00000566215 ANXA1P04083 346 aa7.81□□□□□ -1.16
UBE3A-205ENST00000566215 BEND3Q5T5X7 828 aa7.81□□□□□ -1.16
UBE3A-205ENST00000566215 TEKT1Q969V4 418 aa7.81□□□□□ -1.16
UBE3A-205ENST00000566215 PHAXQ9H814 394 aaKnown RBP7.81□□□□□ -1.16
UBE3A-205ENST00000566215 ELP3Q9H9T3 547 aa7.81□□□□□ -1.16
UBE3A-205ENST00000566215 NRBP1Q9UHY1 535 aa7.81□□□□□ -1.16
UBE3A-205ENST00000566215 CIAO1O76071 339 aa7.81□□□□□ -1.16
UBE3A-205ENST00000566215 HMGCRP04035 888 aa7.81□□□□□ -1.16
UBE3A-205ENST00000566215 PABPC4Q13310 644 aaKnown RBP eCLIP7.81□□□□□ -1.16
UBE3A-205ENST00000566215 APOBEC3HQ6NTF7 200 aaKnown RBP7.81□□□□□ -1.16
UBE3A-205ENST00000566215 SLC17A8Q8NDX2 589 aa7.81□□□□□ -1.16
UBE3A-205ENST00000566215 WDR66Q8TBY9 1149 aa7.81□□□□□ -1.16
UBE3A-205ENST00000566215 SOCS4Q8WXH5 440 aa7.81□□□□□ -1.16
UBE3A-205ENST00000566215 DNAAF4Q8WXU2 420 aa7.81□□□□□ -1.16
UBE3A-205ENST00000566215 FAM84BQ96KN1 310 aaPredicted RBP7.81□□□□□ -1.16
UBE3A-205ENST00000566215 CTNND1O60716 968 aaKnown RBP7.8□□□□□ -1.16
UBE3A-205ENST00000566215 HIBADHP31937 336 aaKnown RBP7.8□□□□□ -1.16
UBE3A-205ENST00000566215 IFIT5Q13325 482 aaKnown RBP7.8□□□□□ -1.16
UBE3A-205ENST00000566215 KIAA0825Q8IV33 1275 aa7.8□□□□□ -1.16
UBE3A-205ENST00000566215 SCYL3Q8IZE3 742 aa7.8□□□□□ -1.16
UBE3A-205ENST00000566215 PRDM6Q9NQX0 595 aa7.8□□□□□ -1.16
UBE3A-205ENST00000566215 AGTPBP1Q9UPW5 1226 aa7.8□□□□□ -1.16
UBE3A-205ENST00000566215 HOXA7P31268 230 aaPredicted RBP7.8□□□□□ -1.16
UBE3A-205ENST00000566215 STK31Q9BXU1 1019 aa7.8□□□□□ -1.16
UBE3A-205ENST00000566215 COL4A6Q14031 1691 aa7.8□□□□□ -1.16
UBE3A-205ENST00000566215 PDHXO00330 501 aa7.79□□□□□ -1.16
UBE3A-205ENST00000566215 PSMC4P43686 418 aa7.79□□□□□ -1.16
UBE3A-205ENST00000566215 ZGPATQ8N5A5 531 aaKnown RBP7.79□□□□□ -1.16
UBE3A-205ENST00000566215 TMOD2Q9NZR1 351 aa7.79□□□□□ -1.16
UBE3A-205ENST00000566215 MSCO60682 206 aa7.79□□□□□ -1.16
UBE3A-205ENST00000566215 RAET1EQ8TD07 263 aa7.79□□□□□ -1.16
UBE3A-205ENST00000566215 WDR18Q9BV38 432 aa7.79□□□□□ -1.16
UBE3A-205ENST00000566215 GJD2Q9UKL4 321 aa7.79□□□□□ -1.16
UBE3A-205ENST00000566215 PI4KAP2A4QPH2 592 aa7.79□□□□□ -1.16
UBE3A-205ENST00000566215 PI4KAP1Q8N8J0 262 aa7.79□□□□□ -1.16
UBE3A-205ENST00000566215 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.79□□□□□ -1.163e-16■■■□□ 18.7
UBE3A-205ENST00000566215 C11orf49Q9H6J7 331 aa7.79□□□□□ -1.16
UBE3A-205ENST00000566215 LRRC37A2A6NM11 1700 aa7.78□□□□□ -1.16
UBE3A-205ENST00000566215 KLRK1P26718 216 aa7.78□□□□□ -1.16
UBE3A-205ENST00000566215 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.78□□□□□ -1.16
UBE3A-205ENST00000566215 CERS3Q8IU89 383 aa7.78□□□□□ -1.16
UBE3A-205ENST00000566215 C8orf58Q8NAV2 365 aa7.78□□□□□ -1.16
UBE3A-205ENST00000566215 SEZ6LQ9BYH1 1024 aa7.78□□□□□ -1.16
UBE3A-205ENST00000566215 GREB1LQ9C091 1923 aaPredicted RBP7.78□□□□□ -1.16
UBE3A-205ENST00000566215 SOX1O00570 391 aaPredicted RBP7.78□□□□□ -1.16
UBE3A-205ENST00000566215 EVI5O60447 810 aa7.78□□□□□ -1.16
UBE3A-205ENST00000566215 HOXC6P09630 235 aa7.78□□□□□ -1.16
UBE3A-205ENST00000566215 SLF2Q8IX21 1173 aa7.78□□□□□ -1.16
UBE3A-205ENST00000566215 C12orf42Q96LP6 360 aa7.78□□□□□ -1.16
UBE3A-205ENST00000566215 MXD3Q9BW11 206 aa7.78□□□□□ -1.16
UBE3A-205ENST00000566215 ADCY3O60266 1144 aa7.77□□□□□ -1.16
UBE3A-205ENST00000566215 KCNJ4P48050 445 aa7.77□□□□□ -1.16
UBE3A-205ENST00000566215 NKX3-2P78367 333 aa7.77□□□□□ -1.16
UBE3A-205ENST00000566215 FLIIQ13045 1269 aa7.77□□□□□ -1.16
UBE3A-205ENST00000566215 MFSD14BQ5SR56 506 aa7.77□□□□□ -1.16
UBE3A-205ENST00000566215 NBPF3Q9H094 633 aa7.77□□□□□ -1.16
UBE3A-205ENST00000566215 TTF2Q9UNY4 1162 aaKnown RBP7.77□□□□□ -1.16
UBE3A-205ENST00000566215 PTPRCP08575 1304 aa7.77□□□□□ -1.17
UBE3A-205ENST00000566215 GRM8O00222 908 aa7.77□□□□□ -1.17
UBE3A-205ENST00000566215 INHAP05111 366 aa7.77□□□□□ -1.17
UBE3A-205ENST00000566215 WDR43Q15061 677 aaKnown RBP eCLIP7.77□□□□□ -1.171e-6■□□□□ 10.7
UBE3A-205ENST00000566215 KRT24Q2M2I5 525 aa7.77□□□□□ -1.17
UBE3A-205ENST00000566215 AOX1Q06278 1338 aa7.76□□□□□ -1.17
UBE3A-205ENST00000566215 PDE8BO95263 885 aa7.76□□□□□ -1.17
UBE3A-205ENST00000566215 COA7Q96BR5 231 aa7.76□□□□□ -1.17
UBE3A-205ENST00000566215 PRKCZQ05513 592 aa7.76□□□□□ -1.17
UBE3A-205ENST00000566215 MORN1Q5T089 497 aa7.76□□□□□ -1.17
UBE3A-205ENST00000566215 AKNAD1Q5T1N1 836 aa7.76□□□□□ -1.17
UBE3A-205ENST00000566215 PRAMEF18Q5VWM3 479 aa7.76□□□□□ -1.17
UBE3A-205ENST00000566215 UBE3BQ7Z3V4 1068 aa7.76□□□□□ -1.17
UBE3A-205ENST00000566215 SH3TC2Q8TF17 1288 aa7.76□□□□□ -1.17
UBE3A-205ENST00000566215 WRNIP1Q96S55 665 aa7.76□□□□□ -1.17
UBE3A-205ENST00000566215 ARHGAP39Q9C0H5 1083 aa7.76□□□□□ -1.17
UBE3A-205ENST00000566215 UNC93B1Q9H1C4 597 aa7.76□□□□□ -1.17
UBE3A-205ENST00000566215 KCNH6Q9H252 994 aa7.76□□□□□ -1.17
UBE3A-205ENST00000566215 PTPRAP18433 802 aa7.75□□□□□ -1.17
UBE3A-205ENST00000566215 MTFR1Q15390 333 aa7.75□□□□□ -1.17
UBE3A-205ENST00000566215 PUM3Q15397 648 aaKnown RBP7.75□□□□□ -1.17
UBE3A-205ENST00000566215 CAVIN4Q5BKX8 364 aa7.75□□□□□ -1.17
UBE3A-205ENST00000566215 COL25A1Q9BXS0 654 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms