RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 ASTN2O75129 1339 aaPredicted RBP15.27■□□□□ 0.04
SHCBP1-204ENST00000565887 CLRN2A0PK11 232 aa15.27■□□□□ 0.04
SHCBP1-204ENST00000565887 GOLIM4O00461 696 aa15.27■□□□□ 0.04
SHCBP1-204ENST00000565887 TRAF5O00463 557 aa15.27■□□□□ 0.04
SHCBP1-204ENST00000565887 NPM3O75607 178 aaKnown RBP15.27■□□□□ 0.04
SHCBP1-204ENST00000565887 CELF2O95319 508 aaKnown RBP15.27■□□□□ 0.04
SHCBP1-204ENST00000565887 PPP4CP60510 307 aa15.27■□□□□ 0.04
SHCBP1-204ENST00000565887 PIH1D3Q9NQM4 214 aaKnown RBP15.27■□□□□ 0.04
SHCBP1-204ENST00000565887 ADM5C9JUS6 153 aa15.26■□□□□ 0.03
SHCBP1-204ENST00000565887 RASA3Q14644 834 aa15.26■□□□□ 0.03
SHCBP1-204ENST00000565887 CST9Q5W186 159 aa15.26■□□□□ 0.03
SHCBP1-204ENST00000565887 B4GALNT3Q6L9W6 998 aa15.26■□□□□ 0.03
SHCBP1-204ENST00000565887 CDC42EP5Q6NZY7 148 aa15.26■□□□□ 0.03
SHCBP1-204ENST00000565887 CDCA5Q96FF9 252 aa15.26■□□□□ 0.03
SHCBP1-204ENST00000565887 HHIPL1Q96JK4 782 aa15.26■□□□□ 0.03
SHCBP1-204ENST00000565887 IDI2Q9BXS1 227 aa15.26■□□□□ 0.03
SHCBP1-204ENST00000565887 PCDHAC2Q9Y5I4 1007 aa15.26■□□□□ 0.03
SHCBP1-204ENST00000565887 AOX1Q06278 1338 aa15.25■□□□□ 0.03
SHCBP1-204ENST00000565887 ECM29Q5VYK3 1845 aa15.25■□□□□ 0.03
SHCBP1-204ENST00000565887 UNCXA6NJT0 531 aa15.25■□□□□ 0.03
SHCBP1-204ENST00000565887 PPP1R12BO60237 982 aaPredicted RBP15.25■□□□□ 0.03
SHCBP1-204ENST00000565887 ENTPD3O75355 529 aa15.25■□□□□ 0.03
SHCBP1-204ENST00000565887 CYP7A1P22680 504 aa15.25■□□□□ 0.03
SHCBP1-204ENST00000565887 BTDP43251 543 aa15.25■□□□□ 0.03
SHCBP1-204ENST00000565887 SLC9C2Q5TAH2 1124 aa15.25■□□□□ 0.03
SHCBP1-204ENST00000565887 FAM151AQ8WW52 585 aa15.25■□□□□ 0.03
SHCBP1-204ENST00000565887 LNPKQ9C0E8 428 aa15.25■□□□□ 0.03
SHCBP1-204ENST00000565887 ANTXR1Q9H6X2 564 aa15.25■□□□□ 0.03
SHCBP1-204ENST00000565887 MYH2Q9UKX2 1941 aa15.25■□□□□ 0.03
SHCBP1-204ENST00000565887 TCP10L2B9ZVM9 353 aa15.24■□□□□ 0.03
SHCBP1-204ENST00000565887 ZFYP08048 801 aaPredicted RBP15.24■□□□□ 0.03
SHCBP1-204ENST00000565887 PDE1AP54750 535 aa15.24■□□□□ 0.03
SHCBP1-204ENST00000565887 MAGEB6Q8N7X4 407 aa15.24■□□□□ 0.03
SHCBP1-204ENST00000565887 ZNF384Q8TF68 577 aa15.24■□□□□ 0.03
SHCBP1-204ENST00000565887 OSBPL3Q9H4L5 887 aa15.24■□□□□ 0.03
SHCBP1-204ENST00000565887 ZNF408Q9H9D4 720 aa15.24■□□□□ 0.03
SHCBP1-204ENST00000565887 GBA2Q9HCG7 927 aaPredicted RBP15.24■□□□□ 0.03
SHCBP1-204ENST00000565887 TRPM7Q96QT4 1865 aa15.24■□□□□ 0.03
SHCBP1-204ENST00000565887 SALL3Q9BXA9 1300 aa15.23■□□□□ 0.03
SHCBP1-204ENST00000565887 UBE3CQ15386 1083 aa15.23■□□□□ 0.03
SHCBP1-204ENST00000565887 DEFB115Q30KQ5 88 aa15.23■□□□□ 0.03
SHCBP1-204ENST00000565887 CENPQQ7L2Z9 268 aaPredicted RBP15.23■□□□□ 0.03
SHCBP1-204ENST00000565887 ARMC9Q7Z3E5 817 aa15.23■□□□□ 0.03
SHCBP1-204ENST00000565887 KBTBD3Q8NAB2 608 aa15.23■□□□□ 0.03
SHCBP1-204ENST00000565887 ABT1Q9ULW3 272 aaKnown RBP15.23■□□□□ 0.03
SHCBP1-204ENST00000565887 TLL2Q9Y6L7 1015 aa15.23■□□□□ 0.03
SHCBP1-204ENST00000565887 NDUFB9Q9Y6M9 179 aa15.23■□□□□ 0.03
SHCBP1-204ENST00000565887 PDE6AP16499 860 aa15.22■□□□□ 0.03
SHCBP1-204ENST00000565887 SAPCD2Q86UD0 394 aa15.22■□□□□ 0.03
SHCBP1-204ENST00000565887 PI4K2BQ8TCG2 481 aa15.22■□□□□ 0.03
SHCBP1-204ENST00000565887 ADD2P35612 726 aa15.21■□□□□ 0.03
SHCBP1-204ENST00000565887 ECE1P42892 770 aa15.21■□□□□ 0.03
SHCBP1-204ENST00000565887 RHBDL3P58872 404 aa15.21■□□□□ 0.03
SHCBP1-204ENST00000565887 DCAF15Q66K64 600 aa15.21■□□□□ 0.03
SHCBP1-204ENST00000565887 TEX11Q8IYF3 940 aa15.21■□□□□ 0.03
SHCBP1-204ENST00000565887 EVI5LQ96CN4 794 aa15.21■□□□□ 0.03
SHCBP1-204ENST00000565887 CCDC136Q96JN2 1154 aa15.21■□□□□ 0.03
SHCBP1-204ENST00000565887 AATFQ9NY61 560 aaKnown RBP eCLIP15.21■□□□□ 0.03
SHCBP1-204ENST00000565887 MAGEB6P1A0A0J9YX57 407 aa15.2■□□□□ 0.02
SHCBP1-204ENST00000565887 RASSF10A6NK89 507 aa15.2■□□□□ 0.02
SHCBP1-204ENST00000565887 WDHD1O75717 1129 aaPredicted RBP15.2■□□□□ 0.02
SHCBP1-204ENST00000565887 IREB2P48200 963 aaKnown RBP15.2■□□□□ 0.02
SHCBP1-204ENST00000565887 CACNB3P54284 484 aa15.2■□□□□ 0.02
SHCBP1-204ENST00000565887 FMR1Q06787 632 aaKnown RBP eCLIP15.2■□□□□ 0.02
SHCBP1-204ENST00000565887 TTLL12Q14166 644 aaPredicted RBP15.2■□□□□ 0.02
SHCBP1-204ENST00000565887 MAP3K11Q16584 847 aa15.2■□□□□ 0.02
SHCBP1-204ENST00000565887 PRAMEF18Q5VWM3 479 aa15.2■□□□□ 0.02
SHCBP1-204ENST00000565887 PLEKHM2Q8IWE5 1019 aa15.2■□□□□ 0.02
SHCBP1-204ENST00000565887 OTUD7AQ8TE49 926 aaPredicted RBP15.2■□□□□ 0.02
SHCBP1-204ENST00000565887 CCDC102AQ96A19 550 aa15.2■□□□□ 0.02
SHCBP1-204ENST00000565887 TEPSINQ96N21 525 aa15.2■□□□□ 0.02
SHCBP1-204ENST00000565887 TMEM39BQ9GZU3 492 aa15.2■□□□□ 0.02
SHCBP1-204ENST00000565887 DHX36Q9H2U1 1008 aaKnown RBP15.2■□□□□ 0.02
SHCBP1-204ENST00000565887 SCAF8Q9UPN6 1271 aaKnown RBP15.2■□□□□ 0.02
SHCBP1-204ENST00000565887 RPAP1Q9BWH6 1393 aaPredicted RBP15.2■□□□□ 0.02
SHCBP1-204ENST00000565887 ZNF532Q9HCE3 1301 aa15.19■□□□□ 0.02
SHCBP1-204ENST00000565887 TCRBV5S4A2TA0A5A2 114 aa15.19■□□□□ 0.02
SHCBP1-204ENST00000565887 RNF113AO15541 343 aaKnown RBP15.19■□□□□ 0.02
SHCBP1-204ENST00000565887 RGS3P49796 1198 aa15.19■□□□□ 0.02
SHCBP1-204ENST00000565887 HUNKP57058 714 aa15.19■□□□□ 0.02
SHCBP1-204ENST00000565887 TCP10Q12799 353 aa15.19■□□□□ 0.02
SHCBP1-204ENST00000565887 NBPF12Q5TAG4 269 aaPredicted RBP15.19■□□□□ 0.02
SHCBP1-204ENST00000565887 EDC3Q96F86 508 aaKnown RBP15.19■□□□□ 0.02
SHCBP1-204ENST00000565887 FAM198AQ9UFP1 575 aa15.19■□□□□ 0.02
SHCBP1-204ENST00000565887 CNTNAP1P78357 1384 aa15.19■□□□□ 0.02
SHCBP1-204ENST00000565887 NFIAQ12857 509 aa15.18■□□□□ 0.02
SHCBP1-204ENST00000565887 TSHZ3Q63HK5 1081 aa15.18■□□□□ 0.02
SHCBP1-204ENST00000565887 DLK2Q6UY11 383 aa15.18■□□□□ 0.02
SHCBP1-204ENST00000565887 ADGRA1Q86SQ6 560 aa15.18■□□□□ 0.02
SHCBP1-204ENST00000565887 ZSCAN29Q8IWY8 852 aaPredicted RBP15.18■□□□□ 0.02
SHCBP1-204ENST00000565887 DNAJC5GQ8N7S2 189 aa15.18■□□□□ 0.02
SHCBP1-204ENST00000565887 SH3RF3Q8TEJ3 882 aaPredicted RBP15.18■□□□□ 0.02
SHCBP1-204ENST00000565887 CRNKL1Q9BZJ0 848 aaKnown RBP15.18■□□□□ 0.02
SHCBP1-204ENST00000565887 DOCK2Q92608 1830 aa15.17■□□□□ 0.02
SHCBP1-204ENST00000565887 USP5P45974 858 aa15.17■□□□□ 0.02
SHCBP1-204ENST00000565887 PICALMQ13492 652 aa15.17■□□□□ 0.02
SHCBP1-204ENST00000565887 RGMBQ6NW40 437 aa15.17■□□□□ 0.02
SHCBP1-204ENST00000565887 TGFBRAP1Q8WUH2 860 aa15.17■□□□□ 0.02
SHCBP1-204ENST00000565887 DDRGK1Q96HY6 314 aa15.17■□□□□ 0.02
SHCBP1-204ENST00000565887 FSD1Q9BTV5 496 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms