RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 EFCC1Q9HA90 598 aa10.71□□□□□ -0.69
CAPN3-213ENST00000565173 COPRSQ9NQ92 184 aa10.71□□□□□ -0.69
CAPN3-213ENST00000565173 TMOD2Q9NZR1 351 aa10.71□□□□□ -0.69
CAPN3-213ENST00000565173 CEP126Q9P2H0 1117 aa10.71□□□□□ -0.69
CAPN3-213ENST00000565173 PA2G4Q9UQ80 394 aaKnown RBP10.71□□□□□ -0.69
CAPN3-213ENST00000565173 SALL1Q9NSC2 1324 aa10.7□□□□□ -0.7
CAPN3-213ENST00000565173 ADORA1P30542 326 aa10.7□□□□□ -0.7
CAPN3-213ENST00000565173 INPP5BP32019 993 aa10.7□□□□□ -0.7
CAPN3-213ENST00000565173 IL15P40933 162 aaPredicted RBP10.7□□□□□ -0.7
CAPN3-213ENST00000565173 PHKA1P46020 1223 aa10.7□□□□□ -0.7
CAPN3-213ENST00000565173 NFIAQ12857 509 aa10.7□□□□□ -0.7
CAPN3-213ENST00000565173 PRPF38BQ5VTL8 546 aaKnown RBP10.7□□□□□ -0.7
CAPN3-213ENST00000565173 INTS3Q68E01 1043 aaKnown RBP10.7□□□□□ -0.7
CAPN3-213ENST00000565173 ARMC5Q96C12 935 aa10.7□□□□□ -0.7
CAPN3-213ENST00000565173 HOOK2Q96ED9 719 aa10.7□□□□□ -0.7
CAPN3-213ENST00000565173 API5Q9BZZ5 524 aaKnown RBP10.7□□□□□ -0.7
CAPN3-213ENST00000565173 ZFYVE28Q9HCC9 887 aa10.7□□□□□ -0.7
CAPN3-213ENST00000565173 FAM198AQ9UFP1 575 aa10.7□□□□□ -0.7
CAPN3-213ENST00000565173 ZNF112Q9UJU3 913 aa10.7□□□□□ -0.7
CAPN3-213ENST00000565173 BTBD19C9JJ37 291 aa10.69□□□□□ -0.7
CAPN3-213ENST00000565173 TLR2O60603 784 aa10.69□□□□□ -0.7
CAPN3-213ENST00000565173 LDHBP07195 334 aaKnown RBP10.69□□□□□ -0.7
CAPN3-213ENST00000565173 CETPP11597 493 aa10.69□□□□□ -0.7
CAPN3-213ENST00000565173 TIMM10P62072 90 aa10.69□□□□□ -0.7
CAPN3-213ENST00000565173 PPATQ06203 517 aa10.69□□□□□ -0.7
CAPN3-213ENST00000565173 TCP10Q12799 353 aa10.69□□□□□ -0.7
CAPN3-213ENST00000565173 PPIL2Q13356 520 aa10.69□□□□□ -0.7
CAPN3-213ENST00000565173 SNAPC2Q13487 334 aa10.69□□□□□ -0.7
CAPN3-213ENST00000565173 TAF1CQ15572 869 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-213ENST00000565173 CCDC102BQ68D86 513 aa10.69□□□□□ -0.7
CAPN3-213ENST00000565173 ZFPM1Q8IX07 1006 aa10.69□□□□□ -0.7
CAPN3-213ENST00000565173 ARHGAP45Q92619 1136 aa10.69□□□□□ -0.7
CAPN3-213ENST00000565173 ZNF341Q9BYN7 854 aa10.69□□□□□ -0.7
CAPN3-213ENST00000565173 ZCCHC17Q9NP64 241 aaKnown RBP10.69□□□□□ -0.7
CAPN3-213ENST00000565173 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-213ENST00000565173 CCER2I3L3R5 266 aa10.68□□□□□ -0.7
CAPN3-213ENST00000565173 SEMA3EO15041 775 aa10.68□□□□□ -0.7
CAPN3-213ENST00000565173 MTX1Q13505 466 aa10.68□□□□□ -0.7
CAPN3-213ENST00000565173 MOGSQ13724 837 aa10.68□□□□□ -0.7
CAPN3-213ENST00000565173 DCAF15Q66K64 600 aa10.68□□□□□ -0.7
CAPN3-213ENST00000565173 USP40Q9NVE5 1235 aa10.68□□□□□ -0.7
CAPN3-213ENST00000565173 GNL3LQ9NVN8 582 aaKnown RBP10.68□□□□□ -0.7
CAPN3-213ENST00000565173 DENND2AQ9ULE3 1009 aa10.68□□□□□ -0.7
CAPN3-213ENST00000565173 MYH13Q9UKX3 1938 aa10.68□□□□□ -0.7
CAPN3-213ENST00000565173 ATRNL1Q5VV63 1379 aa10.67□□□□□ -0.7
CAPN3-213ENST00000565173 GAKO14976 1311 aa10.67□□□□□ -0.7
CAPN3-213ENST00000565173 PHF20L1A8MW92 1017 aa10.67□□□□□ -0.7
CAPN3-213ENST00000565173 EN2P19622 333 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-213ENST00000565173 MAP3K10Q02779 954 aa10.67□□□□□ -0.7
CAPN3-213ENST00000565173 RASGRF1Q13972 1273 aa10.67□□□□□ -0.7
CAPN3-213ENST00000565173 C17orf99Q6UX52 265 aa10.67□□□□□ -0.7
CAPN3-213ENST00000565173 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-213ENST00000565173 ZNF333Q96JL9 665 aa10.67□□□□□ -0.7
CAPN3-213ENST00000565173 ARHGAP39Q9C0H5 1083 aa10.67□□□□□ -0.7
CAPN3-213ENST00000565173 KCNH4Q9UQ05 1017 aa10.67□□□□□ -0.7
CAPN3-213ENST00000565173 HDAC5Q9UQL6 1122 aa10.67□□□□□ -0.7
CAPN3-213ENST00000565173 PTCH2Q9Y6C5 1203 aa10.67□□□□□ -0.7
CAPN3-213ENST00000565173 PDS5AQ29RF7 1337 aaKnown RBP10.66□□□□□ -0.7
CAPN3-213ENST00000565173 LACTBP83111 547 aaPredicted RBP10.66□□□□□ -0.7
CAPN3-213ENST00000565173 TFCP2Q12800 502 aa10.66□□□□□ -0.7
CAPN3-213ENST00000565173 NOL9Q5SY16 702 aaKnown RBP10.66□□□□□ -0.7
CAPN3-213ENST00000565173 SH3BP5LQ7L8J4 393 aa10.66□□□□□ -0.7
CAPN3-213ENST00000565173 ZNF384Q8TF68 577 aa10.66□□□□□ -0.7
CAPN3-213ENST00000565173 FAM163AQ96GL9 167 aaPredicted RBP10.66□□□□□ -0.7
CAPN3-213ENST00000565173 XAGE2Q96GT9 111 aa10.66□□□□□ -0.7
CAPN3-213ENST00000565173 IDI2Q9BXS1 227 aa10.66□□□□□ -0.7
CAPN3-213ENST00000565173 TNNQ9UQP3 1299 aa10.66□□□□□ -0.7
CAPN3-213ENST00000565173 RFX7Q2KHR2 1363 aa10.65□□□□□ -0.7
CAPN3-213ENST00000565173 RBBP6Q7Z6E9 1792 aaKnown RBP10.65□□□□□ -0.7
CAPN3-213ENST00000565173 ADGRA2Q96PE1 1338 aa10.65□□□□□ -0.7
CAPN3-213ENST00000565173 A0A1B0GUL7 405 aa10.65□□□□□ -0.7
CAPN3-213ENST00000565173 SRGAP3O43295 1099 aa10.65□□□□□ -0.7
CAPN3-213ENST00000565173 WDHD1O75717 1129 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-213ENST00000565173 GNAI3P08754 354 aa10.65□□□□□ -0.7
CAPN3-213ENST00000565173 SLURP2P0DP57 97 aa10.65□□□□□ -0.7
CAPN3-213ENST00000565173 TRIM27P14373 513 aa10.65□□□□□ -0.7
CAPN3-213ENST00000565173 CTGFP29279 349 aa10.65□□□□□ -0.7
CAPN3-213ENST00000565173 RGS3P49796 1198 aa10.65□□□□□ -0.7
CAPN3-213ENST00000565173 ARHGEF6Q15052 776 aa10.65□□□□□ -0.7
CAPN3-213ENST00000565173 GPAT2Q6NUI2 795 aa10.65□□□□□ -0.7
CAPN3-213ENST00000565173 ANKRD23Q86SG2 305 aa10.65□□□□□ -0.7
CAPN3-213ENST00000565173 ZGPATQ8N5A5 531 aaKnown RBP10.65□□□□□ -0.7
CAPN3-213ENST00000565173 ZSWIM8A7E2V4 1837 aa10.65□□□□□ -0.71
CAPN3-213ENST00000565173 DDTLA6NHG4 134 aaPredicted RBP10.64□□□□□ -0.71
CAPN3-213ENST00000565173 PDHXO00330 501 aa10.64□□□□□ -0.71
CAPN3-213ENST00000565173 ENTPD3O75355 529 aa10.64□□□□□ -0.71
CAPN3-213ENST00000565173 BCAR3O75815 825 aa10.64□□□□□ -0.71
CAPN3-213ENST00000565173 SLC9C1Q4G0N8 1177 aa10.64□□□□□ -0.71
CAPN3-213ENST00000565173 NBPF11Q86T75 865 aa10.64□□□□□ -0.71
CAPN3-213ENST00000565173 DDX4Q9NQI0 724 aaKnown RBP10.64□□□□□ -0.71
CAPN3-213ENST00000565173 CPA4Q9UI42 421 aa10.64□□□□□ -0.71
CAPN3-213ENST00000565173 AKAP2Q9Y2D5 859 aa10.64□□□□□ -0.71
CAPN3-213ENST00000565173 MYH2Q9UKX2 1941 aa10.64□□□□□ -0.71
CAPN3-213ENST00000565173 KIAA0100Q14667 2235 aaKnown RBP10.64□□□□□ -0.71
CAPN3-213ENST00000565173 GPR75-ASB3A0A0A6YYF3 556 aa10.63□□□□□ -0.71
CAPN3-213ENST00000565173 PNMA6EA0A0J9YXQ4 647 aa10.63□□□□□ -0.71
CAPN3-213ENST00000565173 CXCL11O14625 94 aa10.63□□□□□ -0.71
CAPN3-213ENST00000565173 GNRH1P01148 92 aa10.63□□□□□ -0.71
CAPN3-213ENST00000565173 PTPRAP18433 802 aa10.63□□□□□ -0.71
CAPN3-213ENST00000565173 MECOMQ03112 1051 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms