RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 TOX2Q96NM4 488 aa8.8□□□□□ -1
CHD9-214ENST00000565119 TRIM56Q9BRZ2 755 aaKnown RBP8.8□□□□□ -1
CHD9-214ENST00000565119 KRTAP9-3Q9BYQ3 159 aa8.8□□□□□ -1
CHD9-214ENST00000565119 ZNF503-AS2A6NEH8 195 aa8.79□□□□□ -1
CHD9-214ENST00000565119 RAP1GAPP47736 663 aa8.79□□□□□ -1
CHD9-214ENST00000565119 CLEC4MQ9H2X3 399 aaPredicted RBP8.79□□□□□ -1
CHD9-214ENST00000565119 SRPK2P78362 688 aaKnown RBP8.78□□□□□ -1
CHD9-214ENST00000565119 MLANAQ16655 118 aa8.78□□□□□ -1
CHD9-214ENST00000565119 FLAD1Q8NFF5 587 aa8.78□□□□□ -1
CHD9-214ENST00000565119 HELQQ8TDG4 1101 aa8.78□□□□□ -1
CHD9-214ENST00000565119 SNX29Q8TEQ0 813 aa8.78□□□□□ -1
CHD9-214ENST00000565119 CRIM1Q9NZV1 1036 aa8.78□□□□□ -1
CHD9-214ENST00000565119 PPP1R9AQ9ULJ8 1098 aa8.78□□□□□ -1
CHD9-214ENST00000565119 POLIQ9UNA4 740 aa8.78□□□□□ -1
CHD9-214ENST00000565119 A0A096LPE4 126 aa8.77□□□□□ -1.01
CHD9-214ENST00000565119 A0A1W2PPZ6 126 aa8.77□□□□□ -1.01
CHD9-214ENST00000565119 AOC2O75106 756 aa8.77□□□□□ -1.01
CHD9-214ENST00000565119 EIF1AXP47813 144 aaKnown RBP8.77□□□□□ -1.01
CHD9-214ENST00000565119 AOC3Q16853 763 aa8.77□□□□□ -1.01
CHD9-214ENST00000565119 SPRED3Q2MJR0 410 aa8.77□□□□□ -1.01
CHD9-214ENST00000565119 ZSWIM9Q86XI8 627 aa8.77□□□□□ -1.01
CHD9-214ENST00000565119 LRRC56Q8IYG6 542 aaPredicted RBP8.77□□□□□ -1.01
CHD9-214ENST00000565119 B8ZZF3 427 aa8.76□□□□□ -1.01
CHD9-214ENST00000565119 TSPAN15O95858 294 aa8.76□□□□□ -1.01
CHD9-214ENST00000565119 CORO1BQ9BR76 489 aa8.76□□□□□ -1.01
CHD9-214ENST00000565119 WDR18Q9BV38 432 aa8.76□□□□□ -1.01
CHD9-214ENST00000565119 ZFYVE1Q9HBF4 777 aa8.76□□□□□ -1.01
CHD9-214ENST00000565119 ZNF777Q9ULD5 760 aaPredicted RBP8.76□□□□□ -1.01
CHD9-214ENST00000565119 AMOTL2Q9Y2J4 779 aa8.76□□□□□ -1.01
CHD9-214ENST00000565119 MPSTP25325 297 aa8.75□□□□□ -1.01
CHD9-214ENST00000565119 BUD31P41223 144 aaPredicted RBP8.75□□□□□ -1.01
CHD9-214ENST00000565119 GRIA4P48058 902 aa8.75□□□□□ -1.01
CHD9-214ENST00000565119 IFI16Q16666 785 aaKnown RBP8.75□□□□□ -1.01
CHD9-214ENST00000565119 SLC23A3Q6PIS1 610 aa8.75□□□□□ -1.01
CHD9-214ENST00000565119 CCNJLQ8IV13 435 aa8.75□□□□□ -1.01
CHD9-214ENST00000565119 PRDM7Q9NQW5 492 aa8.75□□□□□ -1.01
CHD9-214ENST00000565119 FAM53CQ9NYF3 392 aa8.75□□□□□ -1.01
CHD9-214ENST00000565119 PLAGL2Q9UPG8 496 aa8.75□□□□□ -1.01
CHD9-214ENST00000565119 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.74□□□□□ -1.01
CHD9-214ENST00000565119 ATG7O95352 703 aa8.74□□□□□ -1.01
CHD9-214ENST00000565119 ATP2B4P23634 1241 aa8.74□□□□□ -1.01
CHD9-214ENST00000565119 ZSCAN18Q8TBC5 510 aaPredicted RBP8.74□□□□□ -1.01
CHD9-214ENST00000565119 HRASLS5Q96KN8 279 aa8.74□□□□□ -1.01
CHD9-214ENST00000565119 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.73□□□□□ -1.01
CHD9-214ENST00000565119 LEFTY1O75610 366 aa8.73□□□□□ -1.01
CHD9-214ENST00000565119 POLR3DP05423 398 aaPredicted RBP8.73□□□□□ -1.01
CHD9-214ENST00000565119 OXCT1P55809 520 aa8.73□□□□□ -1.01
CHD9-214ENST00000565119 KCNMB1Q16558 191 aa8.73□□□□□ -1.01
CHD9-214ENST00000565119 ANGEL2Q5VTE6 544 aaKnown RBP8.73□□□□□ -1.01
CHD9-214ENST00000565119 SIAH1Q8IUQ4 282 aa8.73□□□□□ -1.01
CHD9-214ENST00000565119 LIN37Q96GY3 246 aaPredicted RBP8.73□□□□□ -1.01
CHD9-214ENST00000565119 TCF12Q99081 682 aa8.73□□□□□ -1.01
CHD9-214ENST00000565119 LMCD1Q9NZU5 365 aa8.73□□□□□ -1.01
CHD9-214ENST00000565119 ZSCAN22P10073 491 aaPredicted RBP8.72□□□□□ -1.01
CHD9-214ENST00000565119 TTLL10Q6ZVT0 673 aa8.72□□□□□ -1.01
CHD9-214ENST00000565119 MKNK2Q9HBH9 465 aa8.72□□□□□ -1.01
CHD9-214ENST00000565119 ZFYVE28Q9HCC9 887 aa8.72□□□□□ -1.01
CHD9-214ENST00000565119 SYNGAP1Q96PV0 1343 aa8.72□□□□□ -1.01
CHD9-214ENST00000565119 A0A1W2PP55 124 aa8.71□□□□□ -1.02
CHD9-214ENST00000565119 TMPRSS2O15393 492 aa8.71□□□□□ -1.02
CHD9-214ENST00000565119 B3GALT4O96024 378 aa8.71□□□□□ -1.02
CHD9-214ENST00000565119 CEACAM5P06731 702 aa8.71□□□□□ -1.02
CHD9-214ENST00000565119 PDE3AQ14432 1141 aa8.71□□□□□ -1.02
CHD9-214ENST00000565119 ECM1Q16610 540 aa8.71□□□□□ -1.02
CHD9-214ENST00000565119 TMEM265A0A087WTH1 108 aa8.7□□□□□ -1.02
CHD9-214ENST00000565119 PPP1R16BQ96T49 567 aa8.7□□□□□ -1.02
CHD9-214ENST00000565119 ANKLE2Q86XL3 938 aa8.69□□□□□ -1.02
CHD9-214ENST00000565119 WDR89Q96FK6 387 aaPredicted RBP8.69□□□□□ -1.02
CHD9-214ENST00000565119 LIN7BQ9HAP6 207 aa8.69□□□□□ -1.02
CHD9-214ENST00000565119 KRT1P04264 644 aa8.68□□□□□ -1.02
CHD9-214ENST00000565119 EHHADHQ08426 723 aa8.68□□□□□ -1.02
CHD9-214ENST00000565119 FYB2Q5VWT5 728 aa8.68□□□□□ -1.02
CHD9-214ENST00000565119 SYDE1Q6ZW31 735 aaPredicted RBP8.68□□□□□ -1.02
CHD9-214ENST00000565119 FANCD2OSQ96PS1 177 aa8.68□□□□□ -1.02
CHD9-214ENST00000565119 DUSP23Q9BVJ7 150 aa8.68□□□□□ -1.02
CHD9-214ENST00000565119 PIDD1Q9HB75 910 aa8.68□□□□□ -1.02
CHD9-214ENST00000565119 CTNND2Q9UQB3 1225 aa8.68□□□□□ -1.02
CHD9-214ENST00000565119 LIG1P18858 919 aa8.67□□□□□ -1.02
CHD9-214ENST00000565119 MTMR3Q13615 1198 aa8.67□□□□□ -1.02
CHD9-214ENST00000565119 ALKBH2Q6NS38 261 aa8.67□□□□□ -1.02
CHD9-214ENST00000565119 PRR23BQ6ZRT6 265 aa8.67□□□□□ -1.02
CHD9-214ENST00000565119 ARHGAP27Q6ZUM4 889 aa8.67□□□□□ -1.02
CHD9-214ENST00000565119 SMYD4Q8IYR2 804 aaPredicted RBP8.67□□□□□ -1.02
CHD9-214ENST00000565119 DDX54Q8TDD1 881 aaKnown RBP8.67□□□□□ -1.02
CHD9-214ENST00000565119 TNKS2Q9H2K2 1166 aa8.67□□□□□ -1.02
CHD9-214ENST00000565119 C1QTNF9P0C862 333 aa8.66□□□□□ -1.02
CHD9-214ENST00000565119 ITIH2P19823 946 aa8.66□□□□□ -1.02
CHD9-214ENST00000565119 GTF3C2Q8WUA4 911 aaPredicted RBP8.66□□□□□ -1.02
CHD9-214ENST00000565119 DISC1Q9NRI5 854 aa8.66□□□□□ -1.02
CHD9-214ENST00000565119 RAPGEFL1Q9UHV5 662 aa8.66□□□□□ -1.02
CHD9-214ENST00000565119 ATXN3LQ9H3M9 355 aa8.65□□□□□ -1.02
CHD9-214ENST00000565119 ZNF576Q9H609 170 aa8.65□□□□□ -1.02
CHD9-214ENST00000565119 CCDC86Q9H6F5 360 aaKnown RBP8.65□□□□□ -1.02
CHD9-214ENST00000565119 USP5P45974 858 aa8.64□□□□□ -1.03
CHD9-214ENST00000565119 ID3Q02535 119 aa8.64□□□□□ -1.03
CHD9-214ENST00000565119 AAMPQ13685 434 aa8.64□□□□□ -1.03
CHD9-214ENST00000565119 GALNT12Q8IXK2 581 aa8.64□□□□□ -1.03
CHD9-214ENST00000565119 ZP2Q05996 745 aa8.63□□□□□ -1.03
CHD9-214ENST00000565119 AP3B2Q13367 1082 aa8.63□□□□□ -1.03
CHD9-214ENST00000565119 HEXIM2Q96MH2 286 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms