RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 EVCP57679 992 aa23.09■■□□□ 1.29
CLN6-205ENST00000564846 OLFM4Q6UX06 510 aa23.09■■□□□ 1.29
CLN6-205ENST00000564846 CHST3Q7LGC8 479 aa23.09■■□□□ 1.29
CLN6-205ENST00000564846 CHMP4CQ96CF2 233 aa23.09■■□□□ 1.29
CLN6-205ENST00000564846 AATFQ9NY61 560 aaKnown RBP eCLIP23.09■■□□□ 1.29
CLN6-205ENST00000564846 C10orf71Q711Q0 1435 aa23.09■■□□□ 1.29
CLN6-205ENST00000564846 AKNAD1Q5T1N1 836 aa23.09■■□□□ 1.29
CLN6-205ENST00000564846 STAG1Q8WVM7 1258 aa23.09■■□□□ 1.29
CLN6-205ENST00000564846 ZNF274Q96GC6 653 aaPredicted RBP23.09■■□□□ 1.29
CLN6-205ENST00000564846 RNF41Q9H4P4 317 aaPredicted RBP23.09■■□□□ 1.29
CLN6-205ENST00000564846 ANAPC4Q9UJX5 808 aa23.09■■□□□ 1.29
CLN6-205ENST00000564846 TIAM2Q8IVF5 1701 aa23.08■■□□□ 1.29
CLN6-205ENST00000564846 KIAA1551Q9HCM1 1747 aa23.08■■□□□ 1.29
CLN6-205ENST00000564846 RIMBP2O15034 1052 aa23.08■■□□□ 1.29
CLN6-205ENST00000564846 PFKFB2O60825 505 aa23.08■■□□□ 1.29
CLN6-205ENST00000564846 PDIA4P13667 645 aaKnown RBP23.08■■□□□ 1.29
CLN6-205ENST00000564846 GJB2P29033 226 aa23.08■■□□□ 1.29
CLN6-205ENST00000564846 CERS3Q8IU89 383 aa23.08■■□□□ 1.29
CLN6-205ENST00000564846 WDR33Q9C0J8 1336 aaKnown RBP23.08■■□□□ 1.29
CLN6-205ENST00000564846 ANTXR2P58335 489 aa23.07■■□□□ 1.28
CLN6-205ENST00000564846 PPARAQ07869 468 aa23.07■■□□□ 1.28
CLN6-205ENST00000564846 APOBRQ0VD83 1088 aa23.07■■□□□ 1.28
CLN6-205ENST00000564846 STK3Q13188 491 aa23.07■■□□□ 1.28
CLN6-205ENST00000564846 MFSD14BQ5SR56 506 aa23.07■■□□□ 1.28
CLN6-205ENST00000564846 CC2D2BQ6DHV5 1058 aa23.07■■□□□ 1.28
CLN6-205ENST00000564846 MFSD6Q6ZSS7 791 aa23.07■■□□□ 1.28
CLN6-205ENST00000564846 KRT23Q9C075 422 aa23.07■■□□□ 1.28
CLN6-205ENST00000564846 BAG3O95817 575 aa23.06■■□□□ 1.28
CLN6-205ENST00000564846 CTDSPL2Q05D32 466 aa23.06■■□□□ 1.28
CLN6-205ENST00000564846 ATP8A2Q9NTI2 1148 aa23.06■■□□□ 1.28
CLN6-205ENST00000564846 NEDD4P46934 1319 aa23.06■■□□□ 1.28
CLN6-205ENST00000564846 PPP4CP60510 307 aa23.06■■□□□ 1.28
CLN6-205ENST00000564846 GRIK5Q16478 980 aa23.06■■□□□ 1.28
CLN6-205ENST00000564846 SLF2Q8IX21 1173 aa23.06■■□□□ 1.28
CLN6-205ENST00000564846 NOL10Q9BSC4 688 aaKnown RBP23.06■■□□□ 1.28
CLN6-205ENST00000564846 SUGT1Q9Y2Z0 365 aa23.06■■□□□ 1.28
CLN6-205ENST00000564846 BAG4O95429 457 aaKnown RBP23.05■■□□□ 1.28
CLN6-205ENST00000564846 C7orf43Q8WVR3 580 aa23.05■■□□□ 1.28
CLN6-205ENST00000564846 TMEM87BQ96K49 555 aa23.05■■□□□ 1.28
CLN6-205ENST00000564846 LLPHQ9BRT6 129 aaKnown RBP23.05■■□□□ 1.28
CLN6-205ENST00000564846 MROH7-TTC4A0A0A0MT08 1334 aa23.04■■□□□ 1.28
CLN6-205ENST00000564846 B4E1Z4 1266 aa23.04■■□□□ 1.28
CLN6-205ENST00000564846 GOLGA6L22H0YM25 854 aa23.04■■□□□ 1.28
CLN6-205ENST00000564846 PTMSP20962 102 aa23.04■■□□□ 1.28
CLN6-205ENST00000564846 PDIA3P30101 505 aaKnown RBP23.04■■□□□ 1.28
CLN6-205ENST00000564846 GTF2IP78347 998 aa23.04■■□□□ 1.28
CLN6-205ENST00000564846 SCRN1Q12765 414 aa23.04■■□□□ 1.28
CLN6-205ENST00000564846 RTFDC1Q9BY42 306 aaPredicted RBP23.04■■□□□ 1.28
CLN6-205ENST00000564846 MINDY4BA8MYZ0 360 aa23.04■■□□□ 1.28
CLN6-205ENST00000564846 G3V3G9 751 aa23.04■■□□□ 1.28
CLN6-205ENST00000564846 STX6O43752 255 aa23.04■■□□□ 1.28
CLN6-205ENST00000564846 PCP11498 1178 aaKnown RBP23.04■■□□□ 1.28
CLN6-205ENST00000564846 SYT1P21579 422 aa23.04■■□□□ 1.28
CLN6-205ENST00000564846 DCAF8Q5TAQ9 597 aa23.04■■□□□ 1.28
CLN6-205ENST00000564846 CYB5R4Q7L1T6 521 aa23.04■■□□□ 1.28
CLN6-205ENST00000564846 FAM163AQ96GL9 167 aaPredicted RBP23.04■■□□□ 1.28
CLN6-205ENST00000564846 ANGEL1Q9UNK9 670 aaKnown RBP23.04■■□□□ 1.28
CLN6-205ENST00000564846 SLX4Q8IY92 1834 aa23.03■■□□□ 1.28
CLN6-205ENST00000564846 PDCP20941 246 aa23.03■■□□□ 1.28
CLN6-205ENST00000564846 DIXDC1Q155Q3 683 aa23.03■■□□□ 1.28
CLN6-205ENST00000564846 PODNQ7Z5L7 613 aa23.03■■□□□ 1.28
CLN6-205ENST00000564846 DCP1AQ9NPI6 582 aaPredicted RBP23.03■■□□□ 1.28
CLN6-205ENST00000564846 SH2B2O14492 632 aaPredicted RBP23.02■■□□□ 1.28
CLN6-205ENST00000564846 GRIPAP1Q4V328 841 aa23.02■■□□□ 1.28
CLN6-205ENST00000564846 CTR9Q6PD62 1173 aa23.02■■□□□ 1.28
CLN6-205ENST00000564846 MTA3Q9BTC8 594 aa23.02■■□□□ 1.28
CLN6-205ENST00000564846 ARPP21Q9UBL0 812 aaPredicted RBP23.02■■□□□ 1.28
CLN6-205ENST00000564846 KDM4AO75164 1064 aa23.01■■□□□ 1.27
CLN6-205ENST00000564846 SBK1Q52WX2 424 aa23.01■■□□□ 1.27
CLN6-205ENST00000564846 GPHNQ9NQX3 736 aaPredicted RBP23.01■■□□□ 1.27
CLN6-205ENST00000564846 GPR75-ASB3A0A0A6YYF3 556 aa23.01■■□□□ 1.27
CLN6-205ENST00000564846 DOK7Q18PE1 504 aa23.01■■□□□ 1.27
CLN6-205ENST00000564846 INCENPQ9NQS7 918 aa23.01■■□□□ 1.27
CLN6-205ENST00000564846 ZSWIM5Q9P217 1185 aa23.01■■□□□ 1.27
CLN6-205ENST00000564846 NAP1L2Q9ULW6 460 aaPredicted RBP23.01■■□□□ 1.27
CLN6-205ENST00000564846 TACC3Q9Y6A5 838 aa23.01■■□□□ 1.27
CLN6-205ENST00000564846 KLF18A0A0U1RQI7 1052 aa23■■□□□ 1.27
CLN6-205ENST00000564846 USP17L12C9JPN9 530 aa23■■□□□ 1.27
CLN6-205ENST00000564846 USP17L21D6R901 530 aa23■■□□□ 1.27
CLN6-205ENST00000564846 ZSCAN22P10073 491 aaPredicted RBP23■■□□□ 1.27
CLN6-205ENST00000564846 SUPT20HQ8NEM7 779 aa23■■□□□ 1.27
CLN6-205ENST00000564846 SMARCC2Q8TAQ2 1214 aa23■■□□□ 1.27
CLN6-205ENST00000564846 NKX2-3Q8TAU0 364 aa23■■□□□ 1.27
CLN6-205ENST00000564846 BRPF3Q9ULD4 1205 aa23■■□□□ 1.27
CLN6-205ENST00000564846 CHD4Q14839 1912 aa22.99■■□□□ 1.27
CLN6-205ENST00000564846 DHX16O60231 1041 aaKnown RBP22.99■■□□□ 1.27
CLN6-205ENST00000564846 FGRP09769 529 aa22.99■■□□□ 1.27
CLN6-205ENST00000564846 PLCG2P16885 1265 aa22.99■■□□□ 1.27
CLN6-205ENST00000564846 LIFRP42702 1097 aa22.99■■□□□ 1.27
CLN6-205ENST00000564846 SART3Q15020 963 aaKnown RBP22.99■■□□□ 1.27
CLN6-205ENST00000564846 FOXD4L5Q5VV16 416 aaPredicted RBP22.99■■□□□ 1.27
CLN6-205ENST00000564846 LARP1BQ659C4 914 aaKnown RBP22.99■■□□□ 1.27
CLN6-205ENST00000564846 TTLL6Q8N841 843 aa22.99■■□□□ 1.27
CLN6-205ENST00000564846 IGDCC4Q8TDY8 1250 aa22.99■■□□□ 1.27
CLN6-205ENST00000564846 FOXD4L4Q8WXT5 416 aaPredicted RBP22.99■■□□□ 1.27
CLN6-205ENST00000564846 ESR2Q92731 530 aa22.99■■□□□ 1.27
CLN6-205ENST00000564846 TOMM22Q9NS69 142 aa22.99■■□□□ 1.27
CLN6-205ENST00000564846 ZNF219Q9P2Y4 722 aaPredicted RBP22.99■■□□□ 1.27
CLN6-205ENST00000564846 GAKO14976 1311 aa22.99■■□□□ 1.27
CLN6-205ENST00000564846 SNED1Q8TER0 1413 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms