RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 NEDD4P46934 1319 aa29.72■■■□□ 2.35
LINC01003-201ENST00000564834 IL1R1P14778 569 aa29.72■■■□□ 2.35
LINC01003-201ENST00000564834 PDIA3P30101 505 aaKnown RBP29.72■■■□□ 2.35
LINC01003-201ENST00000564834 AKNAD1Q5T1N1 836 aa29.72■■■□□ 2.35
LINC01003-201ENST00000564834 SDR42E1Q8WUS8 393 aa29.72■■■□□ 2.35
LINC01003-201ENST00000564834 MASTLQ96GX5 879 aa29.72■■■□□ 2.35
LINC01003-201ENST00000564834 MTMR6Q9Y217 621 aa29.72■■■□□ 2.35
LINC01003-201ENST00000564834 F13A1P00488 732 aa29.71■■■□□ 2.35
LINC01003-201ENST00000564834 DYNLL1P63167 89 aaKnown RBP29.71■■■□□ 2.35
LINC01003-201ENST00000564834 LARP1BQ659C4 914 aaKnown RBP29.71■■■□□ 2.35
LINC01003-201ENST00000564834 DZIP1Q86YF9 867 aaKnown RBP29.71■■■□□ 2.35
LINC01003-201ENST00000564834 STAG1Q8WVM7 1258 aa29.71■■■□□ 2.35
LINC01003-201ENST00000564834 JAG2Q9Y219 1238 aa29.71■■■□□ 2.35
LINC01003-201ENST00000564834 LDHBP07195 334 aaKnown RBP29.7■■■□□ 2.35
LINC01003-201ENST00000564834 CTDSPL2Q05D32 466 aa29.7■■■□□ 2.35
LINC01003-201ENST00000564834 GIMAP6Q6P9H5 292 aa29.7■■■□□ 2.35
LINC01003-201ENST00000564834 B4E1Z4 1266 aa29.69■■■□□ 2.34
LINC01003-201ENST00000564834 DTNBO60941 627 aa29.69■■■□□ 2.34
LINC01003-201ENST00000564834 SMARCC2Q8TAQ2 1214 aa29.69■■■□□ 2.34
LINC01003-201ENST00000564834 KRT23Q9C075 422 aa29.69■■■□□ 2.34
LINC01003-201ENST00000564834 LMBRD1Q9NUN5 540 aa29.69■■■□□ 2.34
LINC01003-201ENST00000564834 ATP6V1DQ9Y5K8 247 aa29.69■■■□□ 2.34
LINC01003-201ENST00000564834 DEKP35659 375 aaKnown RBP29.69■■■□□ 2.34
LINC01003-201ENST00000564834 MFSD6Q6ZSS7 791 aa29.69■■■□□ 2.34
LINC01003-201ENST00000564834 CYB5R4Q7L1T6 521 aa29.69■■■□□ 2.34
LINC01003-201ENST00000564834 TMEM87BQ96K49 555 aa29.69■■■□□ 2.34
LINC01003-201ENST00000564834 GPHNQ9NQX3 736 aaPredicted RBP29.69■■■□□ 2.34
LINC01003-201ENST00000564834 C6orf229H3BNL8 230 aa29.68■■■□□ 2.34
LINC01003-201ENST00000564834 PPARAQ07869 468 aa29.68■■■□□ 2.34
LINC01003-201ENST00000564834 RNF41Q9H4P4 317 aaPredicted RBP29.68■■■□□ 2.34
LINC01003-201ENST00000564834 ANAPC4Q9UJX5 808 aa29.68■■■□□ 2.34
LINC01003-201ENST00000564834 ANGEL1Q9UNK9 670 aaKnown RBP29.68■■■□□ 2.34
LINC01003-201ENST00000564834 MYH2Q9UKX2 1941 aa29.68■■■□□ 2.34
LINC01003-201ENST00000564834 JAK2O60674 1132 aa29.67■■■□□ 2.34
LINC01003-201ENST00000564834 NSUN7Q8NE18 718 aaKnown RBP29.67■■■□□ 2.34
LINC01003-201ENST00000564834 NAP1L2Q9ULW6 460 aaPredicted RBP29.67■■■□□ 2.34
LINC01003-201ENST00000564834 LAMB1P07942 1786 aa29.67■■■□□ 2.34
LINC01003-201ENST00000564834 BAG6P46379 1132 aa29.67■■■□□ 2.34
LINC01003-201ENST00000564834 HMGN5P82970 282 aaKnown RBP29.67■■■□□ 2.34
LINC01003-201ENST00000564834 SF3B2Q13435 895 aaKnown RBP29.67■■■□□ 2.34
LINC01003-201ENST00000564834 CHAMP1Q96JM3 812 aa29.67■■■□□ 2.34
LINC01003-201ENST00000564834 CRNKL1Q9BZJ0 848 aaKnown RBP29.67■■■□□ 2.34
LINC01003-201ENST00000564834 AATFQ9NY61 560 aaKnown RBP eCLIP29.67■■■□□ 2.34
LINC01003-201ENST00000564834 VPS37CA5D8V6 355 aaPredicted RBP29.66■■■□□ 2.34
LINC01003-201ENST00000564834 SH2B2O14492 632 aaPredicted RBP29.66■■■□□ 2.34
LINC01003-201ENST00000564834 CCT2P78371 535 aaKnown RBP29.66■■■□□ 2.34
LINC01003-201ENST00000564834 KLF18A0A0U1RQI7 1052 aa29.65■■■□□ 2.34
LINC01003-201ENST00000564834 GSTO1P78417 241 aa29.65■■■□□ 2.34
LINC01003-201ENST00000564834 KLHL40Q2TBA0 621 aa29.65■■■□□ 2.34
LINC01003-201ENST00000564834 NKX2-3Q8TAU0 364 aa29.65■■■□□ 2.34
LINC01003-201ENST00000564834 BRPF3Q9ULD4 1205 aa29.65■■■□□ 2.34
LINC01003-201ENST00000564834 TACC3Q9Y6A5 838 aa29.65■■■□□ 2.34
LINC01003-201ENST00000564834 CTDNEP1O95476 244 aa29.64■■■□□ 2.34
LINC01003-201ENST00000564834 PRPF40AO75400 957 aaKnown RBP29.64■■■□□ 2.34
LINC01003-201ENST00000564834 MPNDQ8N594 471 aa29.64■■■□□ 2.34
LINC01003-201ENST00000564834 TMX4Q9H1E5 349 aaPredicted RBP29.64■■■□□ 2.34
LINC01003-201ENST00000564834 NCOA5Q9HCD5 579 aaKnown RBP29.64■■■□□ 2.34
LINC01003-201ENST00000564834 KIF3AQ9Y496 699 aa29.64■■■□□ 2.34
LINC01003-201ENST00000564834 DDX49Q9Y6V7 483 aaKnown RBP29.64■■■□□ 2.34
LINC01003-201ENST00000564834 GOLGA8BA8MQT2 603 aa29.63■■■□□ 2.33
LINC01003-201ENST00000564834 KDM4AO75164 1064 aa29.63■■■□□ 2.33
LINC01003-201ENST00000564834 IGDCC4Q8TDY8 1250 aa29.63■■■□□ 2.33
LINC01003-201ENST00000564834 INCENPQ9NQS7 918 aa29.63■■■□□ 2.33
LINC01003-201ENST00000564834 ATP8A2Q9NTI2 1148 aa29.63■■■□□ 2.33
LINC01003-201ENST00000564834 ZSWIM5Q9P217 1185 aa29.63■■■□□ 2.33
LINC01003-201ENST00000564834 PTPDC1A2A3K4 754 aa29.62■■■□□ 2.33
LINC01003-201ENST00000564834 DHX16O60231 1041 aaKnown RBP29.62■■■□□ 2.33
LINC01003-201ENST00000564834 STYK1Q6J9G0 422 aa29.62■■■□□ 2.33
LINC01003-201ENST00000564834 C2CD5Q86YS7 1000 aa29.62■■■□□ 2.33
LINC01003-201ENST00000564834 FAM184AQ8NB25 1140 aa29.62■■■□□ 2.33
LINC01003-201ENST00000564834 MTA3Q9BTC8 594 aa29.62■■■□□ 2.33
LINC01003-201ENST00000564834 HPS5Q9UPZ3 1129 aa29.62■■■□□ 2.33
LINC01003-201ENST00000564834 MINDY4BA8MYZ0 360 aa29.62■■■□□ 2.33
LINC01003-201ENST00000564834 CDC37L1Q7L3B6 337 aa29.62■■■□□ 2.33
LINC01003-201ENST00000564834 TBC1D22AQ8WUA7 517 aa29.62■■■□□ 2.33
LINC01003-201ENST00000564834 COA1Q9GZY4 146 aa29.62■■■□□ 2.33
LINC01003-201ENST00000564834 H0YIN7 160 aa29.61■■■□□ 2.33
LINC01003-201ENST00000564834 LIFRP42702 1097 aa29.61■■■□□ 2.33
LINC01003-201ENST00000564834 SGMS1Q86VZ5 419 aa29.61■■■□□ 2.33
LINC01003-201ENST00000564834 ZNF622Q969S3 477 aaKnown RBP eCLIP29.61■■■□□ 2.33
LINC01003-201ENST00000564834 DCP1AQ9NPI6 582 aaPredicted RBP29.61■■■□□ 2.33
LINC01003-201ENST00000564834 FAM205AQ6ZU69 1335 aa29.6■■■□□ 2.33
LINC01003-201ENST00000564834 LDHCP07864 332 aa29.6■■■□□ 2.33
LINC01003-201ENST00000564834 PCP11498 1178 aaKnown RBP29.6■■■□□ 2.33
LINC01003-201ENST00000564834 DPP8Q6V1X1 898 aaPredicted RBP29.6■■■□□ 2.33
LINC01003-201ENST00000564834 DDX11Q96FC9 970 aa29.6■■■□□ 2.33
LINC01003-201ENST00000564834 GRIK5Q16478 980 aa29.59■■■□□ 2.33
LINC01003-201ENST00000564834 FOXD4L6Q3SYB3 417 aaPredicted RBP29.59■■■□□ 2.33
LINC01003-201ENST00000564834 CTR9Q6PD62 1173 aa29.59■■■□□ 2.33
LINC01003-201ENST00000564834 FOXD4L3Q6VB84 417 aaPredicted RBP29.59■■■□□ 2.33
LINC01003-201ENST00000564834 GZF1Q9H116 711 aaPredicted RBP29.59■■■□□ 2.33
LINC01003-201ENST00000564834 LY9Q9HBG7 655 aa29.59■■■□□ 2.33
LINC01003-201ENST00000564834 TOMM22Q9NS69 142 aa29.59■■■□□ 2.33
LINC01003-201ENST00000564834 SLX4Q8IY92 1834 aa29.59■■■□□ 2.33
LINC01003-201ENST00000564834 TMEM67Q5HYA8 995 aa29.59■■■□□ 2.33
LINC01003-201ENST00000564834 RRP12Q5JTH9 1297 aaKnown RBP29.59■■■□□ 2.33
LINC01003-201ENST00000564834 MROH7-TTC4A0A0A0MT08 1334 aa29.58■■■□□ 2.33
LINC01003-201ENST00000564834 BAG3O95817 575 aa29.58■■■□□ 2.33
LINC01003-201ENST00000564834 PPP4CP60510 307 aa29.58■■■□□ 2.33
LINC01003-201ENST00000564834 SART3Q15020 963 aaKnown RBP29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms