RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 FAM181AQ8N9Y4 354 aa5.91□□□□□ -1.46
CHD9-211ENST00000564600 BCL7CQ8WUZ0 217 aaPredicted RBP5.91□□□□□ -1.46
CHD9-211ENST00000564600 NIF3L1Q9GZT8 377 aa5.91□□□□□ -1.46
CHD9-211ENST00000564600 DAGLAQ9Y4D2 1042 aa5.91□□□□□ -1.46
CHD9-211ENST00000564600 JUNBP17275 347 aaPredicted RBP5.9□□□□□ -1.46
CHD9-211ENST00000564600 PDE4CQ08493 712 aa5.9□□□□□ -1.46
CHD9-211ENST00000564600 DUSP27Q5VZP5 1158 aa5.9□□□□□ -1.46
CHD9-211ENST00000564600 AGBL5Q8NDL9 886 aa5.9□□□□□ -1.46
CHD9-211ENST00000564600 TCF12Q99081 682 aa5.9□□□□□ -1.46
CHD9-211ENST00000564600 BHLHE41Q9C0J9 482 aaPredicted RBP5.9□□□□□ -1.46
CHD9-211ENST00000564600 NPHS2Q9NP85 383 aa5.9□□□□□ -1.46
CHD9-211ENST00000564600 TMC7Q7Z402 723 aa5.89□□□□□ -1.47
CHD9-211ENST00000564600 TMC1Q8TDI8 760 aa5.89□□□□□ -1.47
CHD9-211ENST00000564600 C1GALT1Q9NS00 363 aa5.89□□□□□ -1.47
CHD9-211ENST00000564600 BIN2Q9UBW5 565 aaPredicted RBP5.89□□□□□ -1.47
CHD9-211ENST00000564600 ADAMTS6Q9UKP5 1117 aa5.89□□□□□ -1.47
CHD9-211ENST00000564600 IVNS1ABPQ9Y6Y0 642 aa5.89□□□□□ -1.47
CHD9-211ENST00000564600 EIF1AYO14602 144 aaKnown RBP5.88□□□□□ -1.47
CHD9-211ENST00000564600 ASPAP45381 313 aa5.88□□□□□ -1.47
CHD9-211ENST00000564600 PCDH1Q08174 1060 aa5.88□□□□□ -1.47
CHD9-211ENST00000564600 CDK5R2Q13319 367 aa5.88□□□□□ -1.47
CHD9-211ENST00000564600 CPSF6Q16630 551 aaKnown RBP eCLIP5.88□□□□□ -1.47
CHD9-211ENST00000564600 PI16Q6UXB8 463 aa5.88□□□□□ -1.47
CHD9-211ENST00000564600 SPOCD1Q6ZMY3 1216 aa5.88□□□□□ -1.47
CHD9-211ENST00000564600 CCNJLQ8IV13 435 aa5.88□□□□□ -1.47
CHD9-211ENST00000564600 PLD6Q8N2A8 252 aaKnown RBP5.88□□□□□ -1.47
CHD9-211ENST00000564600 RBCK1Q9BYM8 510 aa5.88□□□□□ -1.47
CHD9-211ENST00000564600 ACSS3Q9H6R3 686 aa5.88□□□□□ -1.47
CHD9-211ENST00000564600 RAD18Q9NS91 495 aa5.88□□□□□ -1.47
CHD9-211ENST00000564600 SLC5A6Q9Y289 635 aa5.88□□□□□ -1.47
CHD9-211ENST00000564600 CPNE3O75131 537 aaKnown RBP5.87□□□□□ -1.47
CHD9-211ENST00000564600 CD8BP10966 210 aa5.87□□□□□ -1.47
CHD9-211ENST00000564600 PDE3BQ13370 1112 aa5.87□□□□□ -1.47
CHD9-211ENST00000564600 POU4F3Q15319 338 aa5.87□□□□□ -1.47
CHD9-211ENST00000564600 EPS8L3Q8TE67 593 aaKnown RBP5.87□□□□□ -1.47
CHD9-211ENST00000564600 CCDC74AQ96AQ1 378 aa5.87□□□□□ -1.47
CHD9-211ENST00000564600 CITED4Q96RK1 184 aa5.87□□□□□ -1.47
CHD9-211ENST00000564600 TRIM56Q9BRZ2 755 aaKnown RBP5.87□□□□□ -1.47
CHD9-211ENST00000564600 YIPF2Q9BWQ6 316 aa5.87□□□□□ -1.47
CHD9-211ENST00000564600 SOX17Q9H6I2 414 aaPredicted RBP5.87□□□□□ -1.47
CHD9-211ENST00000564600 LIN7BQ9HAP6 207 aa5.87□□□□□ -1.47
CHD9-211ENST00000564600 A0A096LPE4 126 aa5.86□□□□□ -1.47
CHD9-211ENST00000564600 A0A1W2PPZ6 126 aa5.86□□□□□ -1.47
CHD9-211ENST00000564600 KRTAP9-7A8MTY7 169 aa5.86□□□□□ -1.47
CHD9-211ENST00000564600 RNASE1P07998 156 aaKnown RBP5.86□□□□□ -1.47
CHD9-211ENST00000564600 MAP7Q14244 749 aa5.86□□□□□ -1.47
CHD9-211ENST00000564600 KIAA0319Q5VV43 1072 aa5.86□□□□□ -1.47
CHD9-211ENST00000564600 SEZ6L2Q6UXD5 910 aa5.86□□□□□ -1.47
CHD9-211ENST00000564600 FAM168AQ92567 244 aa5.86□□□□□ -1.47
CHD9-211ENST00000564600 CSRNP1Q96S65 589 aa5.86□□□□□ -1.47
CHD9-211ENST00000564600 ZC3H12CQ9C0D7 883 aaKnown RBP5.86□□□□□ -1.47
CHD9-211ENST00000564600 RC3H2Q9HBD1 1191 aaKnown RBP5.86□□□□□ -1.47
CHD9-211ENST00000564600 PPP1R9AQ9ULJ8 1098 aa5.86□□□□□ -1.47
CHD9-211ENST00000564600 DSC3Q14574 896 aa5.85□□□□□ -1.47
CHD9-211ENST00000564600 GLIS3Q8NEA6 775 aa5.85□□□□□ -1.47
CHD9-211ENST00000564600 ALKBH8Q96BT7 664 aaKnown RBP5.85□□□□□ -1.47
CHD9-211ENST00000564600 WDR89Q96FK6 387 aaPredicted RBP5.85□□□□□ -1.47
CHD9-211ENST00000564600 SETDB2Q96T68 719 aa5.85□□□□□ -1.47
CHD9-211ENST00000564600 TRAIPQ9BWF2 469 aa5.85□□□□□ -1.47
CHD9-211ENST00000564600 PRDM7Q9NQW5 492 aa5.85□□□□□ -1.47
CHD9-211ENST00000564600 MBNL3Q9NUK0 354 aaKnown RBP5.85□□□□□ -1.47
CHD9-211ENST00000564600 DCTN4Q9UJW0 460 aa5.85□□□□□ -1.47
CHD9-211ENST00000564600 FAM87AP0C7U9 286 aa5.84□□□□□ -1.47
CHD9-211ENST00000564600 MAPK1P28482 360 aa5.84□□□□□ -1.47
CHD9-211ENST00000564600 ZNF157P51786 506 aaPredicted RBP5.84□□□□□ -1.47
CHD9-211ENST00000564600 PDE3AQ14432 1141 aa5.84□□□□□ -1.47
CHD9-211ENST00000564600 FBLN7Q53RD9 439 aa5.84□□□□□ -1.47
CHD9-211ENST00000564600 LRRN4CLQ8ND94 238 aa5.84□□□□□ -1.47
CHD9-211ENST00000564600 DMRTB1Q96MA1 342 aa5.84□□□□□ -1.47
CHD9-211ENST00000564600 EHD4Q9H223 541 aa5.84□□□□□ -1.47
CHD9-211ENST00000564600 ABCB6Q9NP58 842 aa5.84□□□□□ -1.47
CHD9-211ENST00000564600 DBX1A6NMT0 343 aa5.83□□□□□ -1.48
CHD9-211ENST00000564600 TREHO43280 583 aa5.83□□□□□ -1.48
CHD9-211ENST00000564600 LEFTY1O75610 366 aa5.83□□□□□ -1.48
CHD9-211ENST00000564600 LIG1P18858 919 aa5.83□□□□□ -1.48
CHD9-211ENST00000564600 GRM2Q14416 872 aa5.83□□□□□ -1.48
CHD9-211ENST00000564600 OGFOD3Q6PK18 319 aa5.83□□□□□ -1.48
CHD9-211ENST00000564600 WDR18Q9BV38 432 aa5.83□□□□□ -1.48
CHD9-211ENST00000564600 DNAJC25Q9H1X3 360 aa5.83□□□□□ -1.48
CHD9-211ENST00000564600 CLEC4MQ9H2X3 399 aaPredicted RBP5.83□□□□□ -1.48
CHD9-211ENST00000564600 ZNF576Q9H609 170 aa5.83□□□□□ -1.48
CHD9-211ENST00000564600 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.82□□□□□ -1.48
CHD9-211ENST00000564600 AOC2O75106 756 aa5.82□□□□□ -1.48
CHD9-211ENST00000564600 FARP2O94887 1054 aaPredicted RBP5.82□□□□□ -1.48
CHD9-211ENST00000564600 ZNF865P0CJ78 1059 aaPredicted RBP5.82□□□□□ -1.48
CHD9-211ENST00000564600 CYP27A1Q02318 531 aa5.82□□□□□ -1.48
CHD9-211ENST00000564600 KCNA1Q09470 495 aa5.82□□□□□ -1.48
CHD9-211ENST00000564600 FAAP100Q0VG06 881 aa5.82□□□□□ -1.48
CHD9-211ENST00000564600 CORO1BQ9BR76 489 aa5.82□□□□□ -1.48
CHD9-211ENST00000564600 PNMA6FA0A0J9YX94 578 aa5.81□□□□□ -1.48
CHD9-211ENST00000564600 RBAK-RBAKDNI3L0D1 243 aa5.81□□□□□ -1.48
CHD9-211ENST00000564600 GADD45BO75293 160 aaPredicted RBP5.81□□□□□ -1.48
CHD9-211ENST00000564600 CYP11A1P05108 521 aa5.81□□□□□ -1.48
CHD9-211ENST00000564600 NEFLP07196 543 aa5.81□□□□□ -1.48
CHD9-211ENST00000564600 ITPKAP23677 461 aa5.81□□□□□ -1.48
CHD9-211ENST00000564600 KRTAP4-11Q9BYQ6 195 aa5.81□□□□□ -1.48
CHD9-211ENST00000564600 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.81□□□□□ -1.48
CHD9-211ENST00000564600 WWC3Q9ULE0 1092 aa5.81□□□□□ -1.48
CHD9-211ENST00000564600 TMEM238LA0A1B0GVL6 79 aa5.8□□□□□ -1.48
CHD9-211ENST00000564600 B3GALT4O96024 378 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms