RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 USP48Q86UV5 1035 aa20.24■□□□□ 0.83
RNF40-206ENST00000564260 HOOK2Q96ED9 719 aa20.24■□□□□ 0.83
RNF40-206ENST00000564260 IDI2Q9BXS1 227 aa20.24■□□□□ 0.83
RNF40-206ENST00000564260 GLIS2Q9BZE0 524 aaPredicted RBP20.24■□□□□ 0.83
RNF40-206ENST00000564260 DEFB129Q9H1M3 183 aa20.24■□□□□ 0.83
RNF40-206ENST00000564260 TDRD3Q9H7E2 651 aaKnown RBP20.24■□□□□ 0.83
RNF40-206ENST00000564260 CREBZFQ9NS37 354 aa20.24■□□□□ 0.83
RNF40-206ENST00000564260 TMEM88BA6NKF7 163 aa20.23■□□□□ 0.83
RNF40-206ENST00000564260 NF2P35240 595 aa20.23■□□□□ 0.83
RNF40-206ENST00000564260 B4GALNT3Q6L9W6 998 aa20.23■□□□□ 0.83
RNF40-206ENST00000564260 ZNF384Q8TF68 577 aa20.23■□□□□ 0.83
RNF40-206ENST00000564260 ASTN2O75129 1339 aaPredicted RBP20.23■□□□□ 0.83
RNF40-206ENST00000564260 ZFYP08048 801 aaPredicted RBP20.22■□□□□ 0.83
RNF40-206ENST00000564260 BTDP43251 543 aa20.22■□□□□ 0.83
RNF40-206ENST00000564260 UBE3CQ15386 1083 aa20.22■□□□□ 0.83
RNF40-206ENST00000564260 SUPT20HL1Q3ZLR7 823 aa20.22■□□□□ 0.83
RNF40-206ENST00000564260 CDC42EP5Q6NZY7 148 aa20.22■□□□□ 0.83
RNF40-206ENST00000564260 KBTBD3Q8NAB2 608 aa20.22■□□□□ 0.83
RNF40-206ENST00000564260 ANTXR1Q9H6X2 564 aa20.22■□□□□ 0.83
RNF40-206ENST00000564260 VEZTQ9HBM0 779 aa20.22■□□□□ 0.83
RNF40-206ENST00000564260 DOCK2Q92608 1830 aa20.22■□□□□ 0.83
RNF40-206ENST00000564260 CLRN2A0PK11 232 aa20.21■□□□□ 0.83
RNF40-206ENST00000564260 UNCXA6NJT0 531 aa20.21■□□□□ 0.83
RNF40-206ENST00000564260 ENTPD3O75355 529 aa20.21■□□□□ 0.83
RNF40-206ENST00000564260 SLC9C2Q5TAH2 1124 aa20.21■□□□□ 0.83
RNF40-206ENST00000564260 CDCA5Q96FF9 252 aa20.21■□□□□ 0.83
RNF40-206ENST00000564260 HHIPL1Q96JK4 782 aa20.21■□□□□ 0.83
RNF40-206ENST00000564260 BCL11AQ9H165 835 aa20.21■□□□□ 0.83
RNF40-206ENST00000564260 USP40Q9NVE5 1235 aa20.21■□□□□ 0.83
RNF40-206ENST00000564260 PCDHAC2Q9Y5I4 1007 aa20.21■□□□□ 0.83
RNF40-206ENST00000564260 RFX7Q2KHR2 1363 aa20.21■□□□□ 0.83
RNF40-206ENST00000564260 ADM5C9JUS6 153 aa20.2■□□□□ 0.82
RNF40-206ENST00000564260 PDE6AP16499 860 aa20.2■□□□□ 0.82
RNF40-206ENST00000564260 RASA3Q14644 834 aa20.2■□□□□ 0.82
RNF40-206ENST00000564260 MAGEB6Q8N7X4 407 aa20.2■□□□□ 0.82
RNF40-206ENST00000564260 FAM151AQ8WW52 585 aa20.2■□□□□ 0.82
RNF40-206ENST00000564260 COL2A1P02458 1487 aaPredicted RBP20.19■□□□□ 0.82
RNF40-206ENST00000564260 CYP7A1P22680 504 aa20.19■□□□□ 0.82
RNF40-206ENST00000564260 RHBDL3P58872 404 aa20.19■□□□□ 0.82
RNF40-206ENST00000564260 PLEKHM2Q8IWE5 1019 aa20.19■□□□□ 0.82
RNF40-206ENST00000564260 OTUD7AQ8TE49 926 aaPredicted RBP20.19■□□□□ 0.82
RNF40-206ENST00000564260 EVI5LQ96CN4 794 aa20.19■□□□□ 0.82
RNF40-206ENST00000564260 CCDC136Q96JN2 1154 aa20.19■□□□□ 0.82
RNF40-206ENST00000564260 NDUFB9Q9Y6M9 179 aa20.19■□□□□ 0.82
RNF40-206ENST00000564260 MYH2Q9UKX2 1941 aa20.18■□□□□ 0.82
RNF40-206ENST00000564260 TRAF5O00463 557 aa20.18■□□□□ 0.82
RNF40-206ENST00000564260 CELF2O95319 508 aaKnown RBP20.18■□□□□ 0.82
RNF40-206ENST00000564260 ADD2P35612 726 aa20.18■□□□□ 0.82
RNF40-206ENST00000564260 C2orf69Q8N8R5 385 aa20.18■□□□□ 0.82
RNF40-206ENST00000564260 TCRBV5S4A2TA0A5A2 114 aa20.17■□□□□ 0.82
RNF40-206ENST00000564260 CST9Q5W186 159 aa20.17■□□□□ 0.82
RNF40-206ENST00000564260 GBA2Q9HCG7 927 aaPredicted RBP20.17■□□□□ 0.82
RNF40-206ENST00000564260 TCP10L2B9ZVM9 353 aa20.16■□□□□ 0.82
RNF40-206ENST00000564260 PPP1R12BO60237 982 aaPredicted RBP20.16■□□□□ 0.82
RNF40-206ENST00000564260 WDHD1O75717 1129 aaPredicted RBP20.16■□□□□ 0.82
RNF40-206ENST00000564260 MAP3K11Q16584 847 aa20.16■□□□□ 0.82
RNF40-206ENST00000564260 PPP4R2Q9NY27 417 aa20.16■□□□□ 0.82
RNF40-206ENST00000564260 TAOK2Q9UL54 1235 aa20.16■□□□□ 0.82
RNF40-206ENST00000564260 TLL2Q9Y6L7 1015 aa20.16■□□□□ 0.82
RNF40-206ENST00000564260 ZNF532Q9HCE3 1301 aa20.16■□□□□ 0.82
RNF40-206ENST00000564260 CNTNAP1P78357 1384 aa20.16■□□□□ 0.82
RNF40-206ENST00000564260 ATRNL1Q5VV63 1379 aa20.16■□□□□ 0.82
RNF40-206ENST00000564260 TSHZ3Q63HK5 1081 aa20.15■□□□□ 0.82
RNF40-206ENST00000564260 TEX11Q8IYF3 940 aa20.15■□□□□ 0.82
RNF40-206ENST00000564260 EDC3Q96F86 508 aaKnown RBP20.15■□□□□ 0.82
RNF40-206ENST00000564260 TEPSINQ96N21 525 aa20.15■□□□□ 0.82
RNF40-206ENST00000564260 DHX36Q9H2U1 1008 aaKnown RBP20.15■□□□□ 0.82
RNF40-206ENST00000564260 AATFQ9NY61 560 aaKnown RBP eCLIP20.15■□□□□ 0.82
RNF40-206ENST00000564260 FAM198AQ9UFP1 575 aa20.15■□□□□ 0.82
RNF40-206ENST00000564260 PAPPA2Q9BXP8 1791 aa20.15■□□□□ 0.82
RNF40-206ENST00000564260 TRPM7Q96QT4 1865 aa20.15■□□□□ 0.82
RNF40-206ENST00000564260 MAGEB6P1A0A0J9YX57 407 aa20.14■□□□□ 0.81
RNF40-206ENST00000564260 RASSF10A6NK89 507 aa20.14■□□□□ 0.81
RNF40-206ENST00000564260 DCAF15Q66K64 600 aa20.14■□□□□ 0.81
RNF40-206ENST00000564260 ARMC9Q7Z3E5 817 aa20.14■□□□□ 0.81
RNF40-206ENST00000564260 ADGRA1Q86SQ6 560 aa20.14■□□□□ 0.81
RNF40-206ENST00000564260 APPBP2Q92624 585 aa20.14■□□□□ 0.81
RNF40-206ENST00000564260 RIOK1Q9BRS2 568 aaKnown RBP20.14■□□□□ 0.81
RNF40-206ENST00000564260 RNF113AO15541 343 aaKnown RBP20.13■□□□□ 0.81
RNF40-206ENST00000564260 RGS3P49796 1198 aa20.13■□□□□ 0.81
RNF40-206ENST00000564260 NFIAQ12857 509 aa20.13■□□□□ 0.81
RNF40-206ENST00000564260 SAPCD2Q86UD0 394 aa20.13■□□□□ 0.81
RNF40-206ENST00000564260 FSD1Q9BTV5 496 aa20.13■□□□□ 0.81
RNF40-206ENST00000564260 CACNB3P54284 484 aa20.12■□□□□ 0.81
RNF40-206ENST00000564260 CRNKL1Q9BZJ0 848 aaKnown RBP20.12■□□□□ 0.81
RNF40-206ENST00000564260 TMEM39BQ9GZU3 492 aa20.12■□□□□ 0.81
RNF40-206ENST00000564260 OSBPL5Q9H0X9 879 aaPredicted RBP20.12■□□□□ 0.81
RNF40-206ENST00000564260 ZNF408Q9H9D4 720 aa20.12■□□□□ 0.81
RNF40-206ENST00000564260 HIP1O00291 1037 aa20.11■□□□□ 0.81
RNF40-206ENST00000564260 IREB2P48200 963 aaKnown RBP20.11■□□□□ 0.81
RNF40-206ENST00000564260 SH3RF3Q8TEJ3 882 aaPredicted RBP20.11■□□□□ 0.81
RNF40-206ENST00000564260 ABT1Q9ULW3 272 aaKnown RBP20.11■□□□□ 0.81
RNF40-206ENST00000564260 POLR2AP24928 1970 aaKnown RBP20.1■□□□□ 0.81
RNF40-206ENST00000564260 FLT1P17948 1338 aa20.1■□□□□ 0.81
RNF40-206ENST00000564260 TBC1D12O60347 775 aa20.1■□□□□ 0.81
RNF40-206ENST00000564260 GNAT2P19087 354 aa20.1■□□□□ 0.81
RNF40-206ENST00000564260 PDE4AP27815 886 aa20.1■□□□□ 0.81
RNF40-206ENST00000564260 ECE1P42892 770 aa20.1■□□□□ 0.81
RNF40-206ENST00000564260 MAP3K10Q02779 954 aa20.1■□□□□ 0.81
RNF40-206ENST00000564260 NBPF12Q5TAG4 269 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms