RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 CKAP2LQ8IYA6 745 aa12.84□□□□□ -0.35
TCF4-222ENST00000564228 KCNB2Q92953 911 aa12.84□□□□□ -0.35
TCF4-222ENST00000564228 PSD3Q9NYI0 1048 aa12.84□□□□□ -0.35
TCF4-222ENST00000564228 EYA2O00167 538 aa12.84□□□□□ -0.35
TCF4-222ENST00000564228 SERPINB2P05120 415 aa12.84□□□□□ -0.35
TCF4-222ENST00000564228 TM4SF1P30408 202 aa12.84□□□□□ -0.35
TCF4-222ENST00000564228 SNW1Q13573 536 aaKnown RBP12.84□□□□□ -0.35
TCF4-222ENST00000564228 ERCC6LQ2NKX8 1250 aa12.84□□□□□ -0.35
TCF4-222ENST00000564228 ATG9AQ7Z3C6 839 aa12.84□□□□□ -0.35
TCF4-222ENST00000564228 AACSQ86V21 672 aa12.84□□□□□ -0.35
TCF4-222ENST00000564228 IQUBQ8NA54 791 aa12.84□□□□□ -0.35
TCF4-222ENST00000564228 SRRTQ9BXP5 876 aaKnown RBP12.84□□□□□ -0.35
TCF4-222ENST00000564228 OSBPL5Q9H0X9 879 aaPredicted RBP12.84□□□□□ -0.35
TCF4-222ENST00000564228 DNAJC25Q9H1X3 360 aa12.84□□□□□ -0.35
TCF4-222ENST00000564228 IL25Q9H293 177 aa12.84□□□□□ -0.35
TCF4-222ENST00000564228 SEC31BQ9NQW1 1179 aa12.84□□□□□ -0.35
TCF4-222ENST00000564228 IMPACTQ9P2X3 320 aa12.84□□□□□ -0.35
TCF4-222ENST00000564228 RSPH14Q9UHP6 348 aa12.84□□□□□ -0.35
TCF4-222ENST00000564228 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.84□□□□□ -0.35
TCF4-222ENST00000564228 CTAGE5O15320 804 aa12.83□□□□□ -0.36
TCF4-222ENST00000564228 LARGE1O95461 756 aa12.83□□□□□ -0.36
TCF4-222ENST00000564228 CASQ1P31415 396 aa12.83□□□□□ -0.36
TCF4-222ENST00000564228 DDR1Q08345 913 aa12.83□□□□□ -0.36
TCF4-222ENST00000564228 LDHAL6AQ6ZMR3 332 aa12.83□□□□□ -0.36
TCF4-222ENST00000564228 RASEFQ8IZ41 740 aa12.83□□□□□ -0.36
TCF4-222ENST00000564228 NLGN1Q8N2Q7 840 aa12.83□□□□□ -0.36
TCF4-222ENST00000564228 NLRP3Q96P20 1036 aa12.83□□□□□ -0.36
TCF4-222ENST00000564228 BRMS1Q9HCU9 246 aa12.83□□□□□ -0.36
TCF4-222ENST00000564228 POLRMTO00411 1230 aaKnown RBP12.82□□□□□ -0.36
TCF4-222ENST00000564228 CIAO1O76071 339 aa12.82□□□□□ -0.36
TCF4-222ENST00000564228 IFIT2P09913 472 aaKnown RBP12.82□□□□□ -0.36
TCF4-222ENST00000564228 IL15P40933 162 aaPredicted RBP12.82□□□□□ -0.36
TCF4-222ENST00000564228 SLC10A5Q5PT55 438 aa12.82□□□□□ -0.36
TCF4-222ENST00000564228 PRR5LQ6MZQ0 368 aa12.82□□□□□ -0.36
TCF4-222ENST00000564228 SPATA32Q96LK8 384 aa12.82□□□□□ -0.36
TCF4-222ENST00000564228 ZSWIM6Q9HCJ5 1215 aa12.82□□□□□ -0.36
TCF4-222ENST00000564228 CNNM1Q9NRU3 951 aa12.82□□□□□ -0.36
TCF4-222ENST00000564228 PDRG1Q9NUG6 133 aa12.82□□□□□ -0.36
TCF4-222ENST00000564228 PHLPP2Q6ZVD8 1323 aa12.82□□□□□ -0.36
TCF4-222ENST00000564228 MYO1CO00159 1063 aa12.82□□□□□ -0.36
TCF4-222ENST00000564228 CCP110O43303 1012 aa12.82□□□□□ -0.36
TCF4-222ENST00000564228 CASTP20810 708 aaKnown RBP12.82□□□□□ -0.36
TCF4-222ENST00000564228 STX1AQ16623 288 aa12.82□□□□□ -0.36
TCF4-222ENST00000564228 ARHGAP29Q52LW3 1261 aa12.82□□□□□ -0.36
TCF4-222ENST00000564228 LARP1BQ659C4 914 aaKnown RBP12.82□□□□□ -0.36
TCF4-222ENST00000564228 SYT10Q6XYQ8 523 aa12.82□□□□□ -0.36
TCF4-222ENST00000564228 KRBA2Q6ZNG9 492 aa12.82□□□□□ -0.36
TCF4-222ENST00000564228 CCDC150Q8NCX0 1101 aa12.82□□□□□ -0.36
TCF4-222ENST00000564228 GOLGA5Q8TBA6 731 aa12.82□□□□□ -0.36
TCF4-222ENST00000564228 LEO1Q8WVC0 666 aaPredicted RBP12.82□□□□□ -0.36
TCF4-222ENST00000564228 EAF2Q96CJ1 260 aaPredicted RBP12.82□□□□□ -0.36
TCF4-222ENST00000564228 CCDC8Q9H0W5 538 aaPredicted RBP12.82□□□□□ -0.36
TCF4-222ENST00000564228 ORC3Q9UBD5 711 aaPredicted RBP12.82□□□□□ -0.36
TCF4-222ENST00000564228 COL4A1P02462 1669 aa12.82□□□□□ -0.36
TCF4-222ENST00000564228 LRP5O75197 1615 aa12.81□□□□□ -0.36
TCF4-222ENST00000564228 DHX16O60231 1041 aaKnown RBP12.81□□□□□ -0.36
TCF4-222ENST00000564228 MMP10P09238 476 aa12.81□□□□□ -0.36
TCF4-222ENST00000564228 ST5P78524 1137 aa12.81□□□□□ -0.36
TCF4-222ENST00000564228 ST3GAL1Q11201 340 aa12.81□□□□□ -0.36
TCF4-222ENST00000564228 MKRN4PQ13434 485 aaPredicted RBP12.81□□□□□ -0.36
TCF4-222ENST00000564228 SF3B3Q15393 1217 aaKnown RBP12.81□□□□□ -0.36
TCF4-222ENST00000564228 ZSCAN26Q16670 478 aa12.81□□□□□ -0.36
TCF4-222ENST00000564228 NEK11Q8NG66 645 aa12.81□□□□□ -0.36
TCF4-222ENST00000564228 TRERF1Q96PN7 1200 aa12.81□□□□□ -0.36
TCF4-222ENST00000564228 MPHOSPH8Q99549 860 aa12.81□□□□□ -0.36
TCF4-222ENST00000564228 CYP46A1Q9Y6A2 500 aa12.81□□□□□ -0.36
TCF4-222ENST00000564228 ANKRD31Q8N7Z5 1873 aa12.81□□□□□ -0.36
TCF4-222ENST00000564228 IGHMBP2P38935 993 aaKnown RBP12.8□□□□□ -0.36
TCF4-222ENST00000564228 TNNI3KQ59H18 835 aa12.8□□□□□ -0.36
TCF4-222ENST00000564228 CCDC158Q5M9N0 1113 aa12.8□□□□□ -0.36
TCF4-222ENST00000564228 CNTROBQ8N137 903 aa12.8□□□□□ -0.36
TCF4-222ENST00000564228 GOLGA6L1Q8N7Z2 621 aa12.8□□□□□ -0.36
TCF4-222ENST00000564228 FBXO18Q8NFZ0 1043 aa12.8□□□□□ -0.36
TCF4-222ENST00000564228 EXOC4Q96A65 974 aa12.8□□□□□ -0.36
TCF4-222ENST00000564228 PPP1R13BQ96KQ4 1090 aa12.8□□□□□ -0.36
TCF4-222ENST00000564228 PDGFDQ9GZP0 370 aaPredicted RBP12.8□□□□□ -0.36
TCF4-222ENST00000564228 TLR7Q9NYK1 1049 aaKnown RBP12.8□□□□□ -0.36
TCF4-222ENST00000564228 CEP126Q9P2H0 1117 aa12.8□□□□□ -0.36
TCF4-222ENST00000564228 FPGT-TNNI3KV9GXZ4 949 aa12.8□□□□□ -0.36
TCF4-222ENST00000564228 NRXN2Q9P2S2 1712 aa12.8□□□□□ -0.36
TCF4-222ENST00000564228 RTL9Q8NET4 1388 aa12.8□□□□□ -0.36
TCF4-222ENST00000564228 A0A1B0GUL6 1792 aa12.8□□□□□ -0.36
TCF4-222ENST00000564228 ARID5BQ14865 1188 aa12.8□□□□□ -0.36
TCF4-222ENST00000564228 METTL24Q5JXM2 366 aa12.8□□□□□ -0.36
TCF4-222ENST00000564228 ICE2Q659A1 982 aa12.8□□□□□ -0.36
TCF4-222ENST00000564228 UBXN4Q92575 508 aa12.8□□□□□ -0.36
TCF4-222ENST00000564228 CDC5LQ99459 802 aaKnown RBP12.8□□□□□ -0.36
TCF4-222ENST00000564228 TRMT1Q9NXH9 659 aaKnown RBP12.8□□□□□ -0.36
TCF4-222ENST00000564228 RIC1Q4ADV7 1423 aa12.79□□□□□ -0.36
TCF4-222ENST00000564228 NRDCO43847 1150 aa12.79□□□□□ -0.36
TCF4-222ENST00000564228 MMP14P50281 582 aa12.79□□□□□ -0.36
TCF4-222ENST00000564228 CDC37L1Q7L3B6 337 aa12.79□□□□□ -0.36
TCF4-222ENST00000564228 SRLQ86TD4 932 aa12.79□□□□□ -0.36
TCF4-222ENST00000564228 ANKRD18AQ8IVF6 992 aa12.79□□□□□ -0.36
TCF4-222ENST00000564228 PI4K2BQ8TCG2 481 aa12.79□□□□□ -0.36
TCF4-222ENST00000564228 RUFY2Q8WXA3 655 aa12.79□□□□□ -0.36
TCF4-222ENST00000564228 SMARCE1Q969G3 411 aa12.79□□□□□ -0.36
TCF4-222ENST00000564228 GPATCH3Q96I76 525 aa12.79□□□□□ -0.36
TCF4-222ENST00000564228 NEUROD6Q96NK8 337 aa12.79□□□□□ -0.36
TCF4-222ENST00000564228 RIPOR2Q9Y4F9 1068 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms