RNA–Protein interactions for RNA: ENST00000563888.6

TCF4-221, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-221ENST00000563888 NYXQ9GZU5 481 aa9.73□□□□□ -0.85
TCF4-221ENST00000563888 ASTN2O75129 1339 aaPredicted RBP9.73□□□□□ -0.85
TCF4-221ENST00000563888 PSMD14O00487 310 aa9.72□□□□□ -0.85
TCF4-221ENST00000563888 TM4SF4P48230 202 aa9.72□□□□□ -0.85
TCF4-221ENST00000563888 KIAA2012Q0VF49 1180 aa9.72□□□□□ -0.85
TCF4-221ENST00000563888 OTOP1Q7RTM1 612 aa9.72□□□□□ -0.85
TCF4-221ENST00000563888 BPHLQ86WA6 291 aaPredicted RBP9.72□□□□□ -0.85
TCF4-221ENST00000563888 MPNDQ8N594 471 aa9.72□□□□□ -0.85
TCF4-221ENST00000563888 ADAM32Q8TC27 787 aa9.72□□□□□ -0.85
TCF4-221ENST00000563888 GGA3Q9NZ52 723 aa9.72□□□□□ -0.85
TCF4-221ENST00000563888 ATP6V0A2Q9Y487 856 aa9.72□□□□□ -0.85
TCF4-221ENST00000563888 PITPNM2Q9BZ72 1349 aa9.72□□□□□ -0.85
TCF4-221ENST00000563888 LAMA3Q16787 3333 aa9.72□□□□□ -0.85
TCF4-221ENST00000563888 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.71□□□□□ -0.86
TCF4-221ENST00000563888 ATP9BO43861 1147 aa9.71□□□□□ -0.86
TCF4-221ENST00000563888 GPTP24298 496 aa9.71□□□□□ -0.86
TCF4-221ENST00000563888 LINC01559Q495D7 138 aa9.71□□□□□ -0.86
TCF4-221ENST00000563888 NOM1Q5C9Z4 860 aaKnown RBP9.71□□□□□ -0.86
TCF4-221ENST00000563888 TBC1D9Q6ZT07 1266 aa9.71□□□□□ -0.86
TCF4-221ENST00000563888 MORC1Q86VD1 984 aa9.71□□□□□ -0.86
TCF4-221ENST00000563888 IL17REQ8NFR9 667 aa9.71□□□□□ -0.86
TCF4-221ENST00000563888 DPF3Q92784 378 aa9.71□□□□□ -0.86
TCF4-221ENST00000563888 DPF2Q92785 391 aa9.71□□□□□ -0.86
TCF4-221ENST00000563888 UCN2Q96RP3 112 aa9.71□□□□□ -0.86
TCF4-221ENST00000563888 RTFDC1Q9BY42 306 aaPredicted RBP9.71□□□□□ -0.86
TCF4-221ENST00000563888 CEP126Q9P2H0 1117 aa9.71□□□□□ -0.86
TCF4-221ENST00000563888 SCAF8Q9UPN6 1271 aaKnown RBP9.71□□□□□ -0.86
TCF4-221ENST00000563888 AKAP11Q9UKA4 1901 aa9.71□□□□□ -0.86
TCF4-221ENST00000563888 KIAA0100Q14667 2235 aaKnown RBP9.71□□□□□ -0.86
TCF4-221ENST00000563888 VCANP13611 3396 aa9.71□□□□□ -0.86
TCF4-221ENST00000563888 BTBD11A6QL63 1104 aa9.7□□□□□ -0.86
TCF4-221ENST00000563888 SKIP12755 728 aa9.7□□□□□ -0.86
TCF4-221ENST00000563888 KIF4BQ2VIQ3 1234 aa9.7□□□□□ -0.86
TCF4-221ENST00000563888 SLC4A8Q2Y0W8 1093 aa9.7□□□□□ -0.86
TCF4-221ENST00000563888 PRAMEF18Q5VWM3 479 aa9.7□□□□□ -0.86
TCF4-221ENST00000563888 NBPF10Q6P3W6 841 aaKnown RBP9.7□□□□□ -0.86
TCF4-221ENST00000563888 PTPN22Q9Y2R2 807 aa9.7□□□□□ -0.86
TCF4-221ENST00000563888 KIF7Q2M1P5 1343 aa9.7□□□□□ -0.86
TCF4-221ENST00000563888 SREBF2Q12772 1141 aa9.69□□□□□ -0.86
TCF4-221ENST00000563888 ANGEL2Q5VTE6 544 aaKnown RBP9.69□□□□□ -0.86
TCF4-221ENST00000563888 COL25A1Q9BXS0 654 aaPredicted RBP9.69□□□□□ -0.86
TCF4-221ENST00000563888 DBNDD1Q9H9R9 158 aa9.69□□□□□ -0.86
TCF4-221ENST00000563888 KCNQ5Q9NR82 932 aa9.69□□□□□ -0.86
TCF4-221ENST00000563888 MAFBQ9Y5Q3 323 aaPredicted RBP9.69□□□□□ -0.86
TCF4-221ENST00000563888 ABCC4O15439 1325 aa9.68□□□□□ -0.86
TCF4-221ENST00000563888 GNAT3A8MTJ3 354 aa9.68□□□□□ -0.86
TCF4-221ENST00000563888 FKBP1BP68106 108 aa9.68□□□□□ -0.86
TCF4-221ENST00000563888 SCARF1Q14162 830 aa9.68□□□□□ -0.86
TCF4-221ENST00000563888 SUSD4Q5VX71 490 aa9.68□□□□□ -0.86
TCF4-221ENST00000563888 SH3BP5LQ7L8J4 393 aa9.68□□□□□ -0.86
TCF4-221ENST00000563888 RNF135Q8IUD6 432 aa9.68□□□□□ -0.86
TCF4-221ENST00000563888 ZNF511Q8NB15 262 aa9.68□□□□□ -0.86
TCF4-221ENST00000563888 RETREG2Q8NC44 543 aa9.68□□□□□ -0.86
TCF4-221ENST00000563888 CD99L2Q8TCZ2 262 aa9.68□□□□□ -0.86
TCF4-221ENST00000563888 ARMC5Q96C12 935 aa9.68□□□□□ -0.86
TCF4-221ENST00000563888 NLRP3Q96P20 1036 aa9.68□□□□□ -0.86
TCF4-221ENST00000563888 VRTNQ9H8Y1 702 aa9.68□□□□□ -0.86
TCF4-221ENST00000563888 WTIPA6NIX2 430 aaPredicted RBP9.67□□□□□ -0.86
TCF4-221ENST00000563888 SNRPA1P09661 255 aaKnown RBP9.67□□□□□ -0.86
TCF4-221ENST00000563888 PRKG1Q13976 671 aa9.67□□□□□ -0.86
TCF4-221ENST00000563888 SP8Q8IXZ3 490 aa9.67□□□□□ -0.86
TCF4-221ENST00000563888 OCSTAMPQ9BR26 566 aa9.67□□□□□ -0.86
TCF4-221ENST00000563888 EFCC1Q9HA90 598 aa9.67□□□□□ -0.86
TCF4-221ENST00000563888 RNF223E7ERA6 249 aa9.66□□□□□ -0.86
TCF4-221ENST00000563888 PIK3CDO00329 1044 aa9.66□□□□□ -0.86
TCF4-221ENST00000563888 SOX1O00570 391 aaPredicted RBP9.66□□□□□ -0.86
TCF4-221ENST00000563888 BBOX1O75936 387 aa9.66□□□□□ -0.86
TCF4-221ENST00000563888 RPS12P25398 132 aaKnown RBP9.66□□□□□ -0.86
TCF4-221ENST00000563888 TCIRG1Q13488 830 aa9.66□□□□□ -0.86
TCF4-221ENST00000563888 ANKLE1Q8NAG6 615 aa9.66□□□□□ -0.86
TCF4-221ENST00000563888 FOXJ1Q92949 421 aa9.66□□□□□ -0.86
TCF4-221ENST00000563888 ERO1AQ96HE7 468 aa9.66□□□□□ -0.86
TCF4-221ENST00000563888 CFHR5Q9BXR6 569 aa9.66□□□□□ -0.86
TCF4-221ENST00000563888 SPTBN5Q9NRC6 3674 aaKnown RBP9.66□□□□□ -0.86
TCF4-221ENST00000563888 UBN2Q6ZU65 1347 aa9.65□□□□□ -0.86
TCF4-221ENST00000563888 ALDH1A1P00352 501 aa9.65□□□□□ -0.86
TCF4-221ENST00000563888 SLC10A4Q96EP9 437 aa9.65□□□□□ -0.86
TCF4-221ENST00000563888 ZNF333Q96JL9 665 aa9.65□□□□□ -0.86
TCF4-221ENST00000563888 RIC1Q4ADV7 1423 aa9.65□□□□□ -0.87
TCF4-221ENST00000563888 ECE2O60344 883 aa9.64□□□□□ -0.87
TCF4-221ENST00000563888 PTPN12Q05209 780 aaKnown RBP9.64□□□□□ -0.87
TCF4-221ENST00000563888 SLC9C1Q4G0N8 1177 aa9.64□□□□□ -0.87
TCF4-221ENST00000563888 KIF6Q6ZMV9 814 aa9.64□□□□□ -0.87
TCF4-221ENST00000563888 TTLL7Q6ZT98 887 aa9.64□□□□□ -0.87
TCF4-221ENST00000563888 SH3RF1Q7Z6J0 888 aa9.64□□□□□ -0.87
TCF4-221ENST00000563888 NBPF11Q86T75 865 aa9.64□□□□□ -0.87
TCF4-221ENST00000563888 TRAIPQ9BWF2 469 aa9.64□□□□□ -0.87
TCF4-221ENST00000563888 PANK3Q9H999 370 aa9.64□□□□□ -0.87
TCF4-221ENST00000563888 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.64□□□□□ -0.87
TCF4-221ENST00000563888 NSFL1CQ9UNZ2 370 aaKnown RBP9.64□□□□□ -0.87
TCF4-221ENST00000563888 RRP7AQ9Y3A4 280 aaKnown RBP9.64□□□□□ -0.87
TCF4-221ENST00000563888 UBR2Q8IWV8 1755 aa9.64□□□□□ -0.87
TCF4-221ENST00000563888 PAPPA2Q9BXP8 1791 aa9.64□□□□□ -0.87
TCF4-221ENST00000563888 USP17L3A6NCW0 530 aa9.63□□□□□ -0.87
TCF4-221ENST00000563888 USP17L4A6NCW7 530 aa9.63□□□□□ -0.87
TCF4-221ENST00000563888 USP17L5A8MUK1 530 aa9.63□□□□□ -0.87
TCF4-221ENST00000563888 ERVV-1B6SEH8 477 aa9.63□□□□□ -0.87
TCF4-221ENST00000563888 NTSR2O95665 410 aa9.63□□□□□ -0.87
TCF4-221ENST00000563888 SH3BP2P78314 561 aa9.63□□□□□ -0.87
TCF4-221ENST00000563888 RNF20Q5VTR2 975 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms