RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 ATG3Q9NT62 314 aa6.37□□□□□ -1.39
HMGB1P33-201ENST00000563485 PPP4R2Q9NY27 417 aa6.37□□□□□ -1.39
HMGB1P33-201ENST00000563485 PIM2Q9P1W9 311 aa6.37□□□□□ -1.39
HMGB1P33-201ENST00000563485 PPP1R9AQ9ULJ8 1098 aa6.37□□□□□ -1.39
HMGB1P33-201ENST00000563485 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P33-201ENST00000563485 TMPRSS2O15393 492 aa6.36□□□□□ -1.39
HMGB1P33-201ENST00000563485 ZNF862O60290 1169 aa6.36□□□□□ -1.39
HMGB1P33-201ENST00000563485 ADAMTS4O75173 837 aa6.36□□□□□ -1.39
HMGB1P33-201ENST00000563485 GSTP1P09211 210 aaKnown RBP6.36□□□□□ -1.39
HMGB1P33-201ENST00000563485 XRCC5P13010 732 aaKnown RBP6.36□□□□□ -1.39
HMGB1P33-201ENST00000563485 ASPAP45381 313 aa6.36□□□□□ -1.39
HMGB1P33-201ENST00000563485 ZAR1Q86SH2 424 aa6.36□□□□□ -1.39
HMGB1P33-201ENST00000563485 DTX1Q86Y01 620 aa6.36□□□□□ -1.39
HMGB1P33-201ENST00000563485 ZSCAN29Q8IWY8 852 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P33-201ENST00000563485 GIMAP7Q8NHV1 300 aa6.36□□□□□ -1.39
HMGB1P33-201ENST00000563485 STK35Q8TDR2 534 aa6.36□□□□□ -1.39
HMGB1P33-201ENST00000563485 GATA6Q92908 595 aa6.36□□□□□ -1.39
HMGB1P33-201ENST00000563485 OSBPL1AQ9BXW6 950 aa6.36□□□□□ -1.39
HMGB1P33-201ENST00000563485 TMEM39AQ9NV64 488 aa6.36□□□□□ -1.39
HMGB1P33-201ENST00000563485 WWC3Q9ULE0 1092 aa6.36□□□□□ -1.39
HMGB1P33-201ENST00000563485 AKAP2Q9Y2D5 859 aa6.36□□□□□ -1.39
HMGB1P33-201ENST00000563485 SYNGAP1Q96PV0 1343 aa6.35□□□□□ -1.39
HMGB1P33-201ENST00000563485 FAM170BA6NMN3 283 aa6.35□□□□□ -1.39
HMGB1P33-201ENST00000563485 PPP2R3AQ06190 1150 aa6.35□□□□□ -1.39
HMGB1P33-201ENST00000563485 PDZD3Q86UT5 571 aa6.35□□□□□ -1.39
HMGB1P33-201ENST00000563485 SULF2Q8IWU5 870 aa6.35□□□□□ -1.39
HMGB1P33-201ENST00000563485 C3orf58Q8NDZ4 430 aa6.35□□□□□ -1.39
HMGB1P33-201ENST00000563485 KRTAP4-8Q9BYQ9 185 aa6.35□□□□□ -1.39
HMGB1P33-201ENST00000563485 LEMD3Q9Y2U8 911 aa6.35□□□□□ -1.39
HMGB1P33-201ENST00000563485 DYNC1LI2O43237 492 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P33-201ENST00000563485 MAP7Q14244 749 aa6.34□□□□□ -1.39
HMGB1P33-201ENST00000563485 KIF4BQ2VIQ3 1234 aa6.34□□□□□ -1.39
HMGB1P33-201ENST00000563485 FBF1Q8TES7 1133 aa6.34□□□□□ -1.39
HMGB1P33-201ENST00000563485 PSMG3-AS1Q96PY0 264 aa6.34□□□□□ -1.39
HMGB1P33-201ENST00000563485 OSBPL7Q9BZF2 842 aa6.34□□□□□ -1.39
HMGB1P33-201ENST00000563485 LGR6Q9HBX8 967 aa6.34□□□□□ -1.39
HMGB1P33-201ENST00000563485 CRIM1Q9NZV1 1036 aa6.34□□□□□ -1.39
HMGB1P33-201ENST00000563485 DAGLAQ9Y4D2 1042 aa6.34□□□□□ -1.39
HMGB1P33-201ENST00000563485 FOSL1P15407 271 aa6.33□□□□□ -1.4
HMGB1P33-201ENST00000563485 GP2P55259 537 aaKnown RBP6.33□□□□□ -1.4
HMGB1P33-201ENST00000563485 ID3Q02535 119 aa6.33□□□□□ -1.4
HMGB1P33-201ENST00000563485 SEZ6L2Q6UXD5 910 aa6.33□□□□□ -1.4
HMGB1P33-201ENST00000563485 KCNB2Q92953 911 aa6.33□□□□□ -1.4
HMGB1P33-201ENST00000563485 METTL22Q9BUU2 404 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P33-201ENST00000563485 KRT82Q9NSB4 513 aa6.33□□□□□ -1.4
HMGB1P33-201ENST00000563485 PCDHGC5Q9Y5F6 944 aa6.33□□□□□ -1.4
HMGB1P33-201ENST00000563485 OAS3Q9Y6K5 1087 aaKnown RBP6.33□□□□□ -1.4
HMGB1P33-201ENST00000563485 FBXO24O75426 580 aa6.32□□□□□ -1.4
HMGB1P33-201ENST00000563485 P4HBP07237 508 aaKnown RBP6.32□□□□□ -1.4
HMGB1P33-201ENST00000563485 SLFN14P0C7P3 912 aa6.32□□□□□ -1.4
HMGB1P33-201ENST00000563485 GSTT1P30711 240 aa6.32□□□□□ -1.4
HMGB1P33-201ENST00000563485 CPSF6Q16630 551 aaKnown RBP eCLIP6.32□□□□□ -1.4
HMGB1P33-201ENST00000563485 MSMPQ1L6U9 139 aa6.32□□□□□ -1.4
HMGB1P33-201ENST00000563485 ALG1LQ6GMV1 187 aa6.32□□□□□ -1.4
HMGB1P33-201ENST00000563485 TPTE2Q6XPS3 522 aa6.32□□□□□ -1.4
HMGB1P33-201ENST00000563485 NECAB3Q96P71 396 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P33-201ENST00000563485 FANCD2OSQ96PS1 177 aa6.32□□□□□ -1.4
HMGB1P33-201ENST00000563485 C1GALT1Q9NS00 363 aa6.32□□□□□ -1.4
HMGB1P33-201ENST00000563485 CYP26A1O43174 497 aa6.31□□□□□ -1.4
HMGB1P33-201ENST00000563485 NME2P22392 152 aa6.31□□□□□ -1.4
HMGB1P33-201ENST00000563485 ARNTP27540 789 aa6.31□□□□□ -1.4
HMGB1P33-201ENST00000563485 ATP2B2Q01814 1243 aa6.31□□□□□ -1.4
HMGB1P33-201ENST00000563485 MAP1SQ66K74 1059 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P33-201ENST00000563485 ZNF765Q7L2R6 523 aa6.31□□□□□ -1.4
HMGB1P33-201ENST00000563485 SRCIN1Q9C0H9 1055 aa6.31□□□□□ -1.4
HMGB1P33-201ENST00000563485 ATXN3LQ9H3M9 355 aa6.31□□□□□ -1.4
HMGB1P33-201ENST00000563485 PIDD1Q9HB75 910 aa6.31□□□□□ -1.4
HMGB1P33-201ENST00000563485 DISC1Q9NRI5 854 aa6.31□□□□□ -1.4
HMGB1P33-201ENST00000563485 ENC1O14682 589 aa6.3□□□□□ -1.4
HMGB1P33-201ENST00000563485 PAGE1O75459 146 aa6.3□□□□□ -1.4
HMGB1P33-201ENST00000563485 WNT11O96014 354 aa6.3□□□□□ -1.4
HMGB1P33-201ENST00000563485 TTLL4Q14679 1199 aa6.3□□□□□ -1.4
HMGB1P33-201ENST00000563485 MPRIPQ6WCQ1 1025 aa6.3□□□□□ -1.4
HMGB1P33-201ENST00000563485 CBX8Q9HC52 389 aa6.3□□□□□ -1.4
HMGB1P33-201ENST00000563485 LRRC4CQ9HCJ2 640 aa6.3□□□□□ -1.4
HMGB1P33-201ENST00000563485 PATL2C9JE40 543 aaKnown RBP6.29□□□□□ -1.4
HMGB1P33-201ENST00000563485 LDHBP07195 334 aaKnown RBP6.29□□□□□ -1.4
HMGB1P33-201ENST00000563485 HCLS1P14317 486 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P33-201ENST00000563485 HNRNPUQ00839 825 aaKnown RBP eCLIP6.29□□□□□ -1.4
HMGB1P33-201ENST00000563485 ZNF252P-AS1Q0IIN9 211 aa6.29□□□□□ -1.4
HMGB1P33-201ENST00000563485 CDK5R2Q13319 367 aa6.29□□□□□ -1.4
HMGB1P33-201ENST00000563485 DUSP27Q5VZP5 1158 aa6.29□□□□□ -1.4
HMGB1P33-201ENST00000563485 SMYD4Q8IYR2 804 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P33-201ENST00000563485 GRIN3AQ8TCU5 1115 aa6.29□□□□□ -1.4
HMGB1P33-201ENST00000563485 GPBAR1Q8TDU6 330 aa6.29□□□□□ -1.4
HMGB1P33-201ENST00000563485 EMILIN2Q9BXX0 1053 aa6.29□□□□□ -1.4
HMGB1P33-201ENST00000563485 C12orf49Q9H741 205 aa6.29□□□□□ -1.4
HMGB1P33-201ENST00000563485 PPM1HQ9ULR3 514 aa6.29□□□□□ -1.4
HMGB1P33-201ENST00000563485 SPG7Q9UQ90 795 aa6.29□□□□□ -1.4
HMGB1P33-201ENST00000563485 GIPC1O14908 333 aa6.28□□□□□ -1.4
HMGB1P33-201ENST00000563485 RNGTTO60942 597 aaKnown RBP6.28□□□□□ -1.4
HMGB1P33-201ENST00000563485 NEFMP07197 916 aa6.28□□□□□ -1.4
HMGB1P33-201ENST00000563485 BMP6P22004 513 aa6.28□□□□□ -1.4
HMGB1P33-201ENST00000563485 CYP27A1Q02318 531 aa6.28□□□□□ -1.4
HMGB1P33-201ENST00000563485 MCTP1Q6DN14 999 aa6.28□□□□□ -1.4
HMGB1P33-201ENST00000563485 OGFOD3Q6PK18 319 aa6.28□□□□□ -1.4
HMGB1P33-201ENST00000563485 AEBP1Q8IUX7 1158 aa6.28□□□□□ -1.4
HMGB1P33-201ENST00000563485 CEP44Q9C0F1 390 aa6.28□□□□□ -1.4
HMGB1P33-201ENST00000563485 PRNPP04156 253 aa6.27□□□□□ -1.41
HMGB1P33-201ENST00000563485 CELA3AP09093 270 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms