RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 VGLL2Q8N8G2 317 aa15.13■□□□□ 0.01
USB1-207ENST00000563149 ZNF592Q92610 1267 aa15.13■□□□□ 0.01
USB1-207ENST00000563149 ERCC4Q92889 916 aaPredicted RBP15.13■□□□□ 0.01
USB1-207ENST00000563149 NBPF3Q9H094 633 aa15.13■□□□□ 0.01
USB1-207ENST00000563149 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.13■□□□□ 0.01
USB1-207ENST00000563149 CNNM1Q9NRU3 951 aa15.13■□□□□ 0.01
USB1-207ENST00000563149 IFNKQ9P0W0 207 aa15.13■□□□□ 0.01
USB1-207ENST00000563149 CUTAO60888 179 aa15.13■□□□□ 0.01
USB1-207ENST00000563149 WDHD1O75717 1129 aaPredicted RBP15.13■□□□□ 0.01
USB1-207ENST00000563149 PDE8BO95263 885 aa15.13■□□□□ 0.01
USB1-207ENST00000563149 SMC2O95347 1197 aa15.13■□□□□ 0.01
USB1-207ENST00000563149 ZSCAN20P17040 1043 aaPredicted RBP15.13■□□□□ 0.01
USB1-207ENST00000563149 SFPQP23246 707 aaKnown RBP eCLIP15.13■□□□□ 0.01
USB1-207ENST00000563149 U2AF2P26368 475 aaKnown RBP eCLIP15.13■□□□□ 0.01
USB1-207ENST00000563149 LIFRP42702 1097 aa15.13■□□□□ 0.01
USB1-207ENST00000563149 TRIM29Q14134 588 aa15.13■□□□□ 0.01
USB1-207ENST00000563149 CYB5R4Q7L1T6 521 aa15.13■□□□□ 0.01
USB1-207ENST00000563149 VPS37DQ86XT2 251 aa15.13■□□□□ 0.01
USB1-207ENST00000563149 ANKRD36CQ5JPF3 1778 aa15.12■□□□□ 0.01
USB1-207ENST00000563149 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.12■□□□□ 0.01
USB1-207ENST00000563149 ZBTB43O43298 467 aa15.12■□□□□ 0.01
USB1-207ENST00000563149 IARSP41252 1262 aaKnown RBP15.12■□□□□ 0.01
USB1-207ENST00000563149 PTPAQ15257 358 aa15.12■□□□□ 0.01
USB1-207ENST00000563149 TMC6Q7Z403 805 aa15.12■□□□□ 0.01
USB1-207ENST00000563149 TBC1D10CQ8IV04 446 aa15.12■□□□□ 0.01
USB1-207ENST00000563149 DNAJC10Q8IXB1 793 aa15.12■□□□□ 0.01
USB1-207ENST00000563149 IGDCC4Q8TDY8 1250 aa15.12■□□□□ 0.01
USB1-207ENST00000563149 WASF1Q92558 559 aa15.12■□□□□ 0.01
USB1-207ENST00000563149 MYH3P11055 1940 aa15.12■□□□□ 0.01
USB1-207ENST00000563149 PDE8AO60658 829 aa15.11■□□□□ 0.01
USB1-207ENST00000563149 SLU7O95391 586 aaKnown RBP15.11■□□□□ 0.01
USB1-207ENST00000563149 FANCCQ00597 558 aa15.11■□□□□ 0.01
USB1-207ENST00000563149 GNL2Q13823 731 aaKnown RBP15.11■□□□□ 0.01
USB1-207ENST00000563149 NTRK3Q16288 839 aa15.11■□□□□ 0.01
USB1-207ENST00000563149 RESP18Q5W5W9 173 aa15.11■□□□□ 0.01
USB1-207ENST00000563149 PI16Q6UXB8 463 aa15.11■□□□□ 0.01
USB1-207ENST00000563149 ZNF397Q8NF99 534 aaPredicted RBP15.11■□□□□ 0.01
USB1-207ENST00000563149 MAP3K14Q99558 947 aa15.11■□□□□ 0.01
USB1-207ENST00000563149 MTA3Q9BTC8 594 aa15.11■□□□□ 0.01
USB1-207ENST00000563149 GREM2Q9H772 168 aa15.11■□□□□ 0.01
USB1-207ENST00000563149 NID2Q14112 1375 aa15.11■□□□□ 0.01
USB1-207ENST00000563149 ZNF532Q9HCE3 1301 aa15.11■□□□□ 0.01
USB1-207ENST00000563149 TCRBV5S4A2TA0A5A2 114 aa15.11■□□□□ 0.01
USB1-207ENST00000563149 PATL2C9JE40 543 aaKnown RBP15.11■□□□□ 0.01
USB1-207ENST00000563149 PDE6AP16499 860 aa15.11■□□□□ 0.01
USB1-207ENST00000563149 FBXW7Q969H0 707 aa15.11■□□□□ 0.01
USB1-207ENST00000563149 AK7Q96M32 723 aa15.11■□□□□ 0.01
USB1-207ENST00000563149 CCDC85AQ96PX6 553 aaPredicted RBP15.11■□□□□ 0.01
USB1-207ENST00000563149 STRBPQ96SI9 672 aaKnown RBP15.11■□□□□ 0.01
USB1-207ENST00000563149 CNNM2Q9H8M5 875 aa15.11■□□□□ 0.01
USB1-207ENST00000563149 PIH1D3Q9NQM4 214 aaKnown RBP15.11■□□□□ 0.01
USB1-207ENST00000563149 GJB4Q9NTQ9 266 aa15.11■□□□□ 0.01
USB1-207ENST00000563149 TRMT1Q9NXH9 659 aaKnown RBP15.11■□□□□ 0.01
USB1-207ENST00000563149 ZNF330Q9Y3S2 320 aaPredicted RBP15.11■□□□□ 0.01
USB1-207ENST00000563149 ABCA3Q99758 1704 aa15.1■□□□□ 0.01
USB1-207ENST00000563149 MROH7-TTC4A0A0A0MT08 1334 aa15.1■□□□□ 0.01
USB1-207ENST00000563149 ARAP2Q8WZ64 1704 aa15.1■□□□□ 0.01
USB1-207ENST00000563149 GOLGA8AA7E2F4 631 aa15.1■□□□□ 0.01
USB1-207ENST00000563149 IRS4O14654 1257 aaPredicted RBP15.1■□□□□ 0.01
USB1-207ENST00000563149 APPP05067 770 aa15.1■□□□□ 0.01
USB1-207ENST00000563149 CDC27P30260 824 aa15.1■□□□□ 0.01
USB1-207ENST00000563149 EVA1CP58658 441 aa15.1■□□□□ 0.01
USB1-207ENST00000563149 MYL5Q02045 173 aa15.1■□□□□ 0.01
USB1-207ENST00000563149 E4F1Q66K89 784 aaPredicted RBP15.1■□□□□ 0.01
USB1-207ENST00000563149 CCDC102BQ68D86 513 aa15.1■□□□□ 0.01
USB1-207ENST00000563149 ARMCX5Q6P1M9 558 aa15.1■□□□□ 0.01
USB1-207ENST00000563149 SHC4Q6S5L8 630 aa15.1■□□□□ 0.01
USB1-207ENST00000563149 OLFM4Q6UX06 510 aa15.1■□□□□ 0.01
USB1-207ENST00000563149 RAB11FIP4Q86YS3 637 aa15.1■□□□□ 0.01
USB1-207ENST00000563149 LPIN2Q92539 896 aa15.1■□□□□ 0.01
USB1-207ENST00000563149 NOL10Q9BSC4 688 aaKnown RBP15.1■□□□□ 0.01
USB1-207ENST00000563149 LY9Q9HBG7 655 aa15.1■□□□□ 0.01
USB1-207ENST00000563149 HOOK1Q9UJC3 728 aaKnown RBP15.1■□□□□ 0.01
USB1-207ENST00000563149 DDX41Q9UJV9 622 aaKnown RBP15.1■□□□□ 0.01
USB1-207ENST00000563149 LRP6O75581 1613 aa15.1■□□□□ 0.01
USB1-207ENST00000563149 MROH5Q6ZUA9 1318 aa15.1■□□□□ 0.01
USB1-207ENST00000563149 B4E1Z4 1266 aa15.09■□□□□ 0.01
USB1-207ENST00000563149 ERVV-1B6SEH8 477 aa15.09■□□□□ 0.01
USB1-207ENST00000563149 BIN1O00499 593 aa15.09■□□□□ 0.01
USB1-207ENST00000563149 IDH1O75874 414 aaKnown RBP15.09■□□□□ 0.01
USB1-207ENST00000563149 MARCKSP29966 332 aaPredicted RBP15.09■□□□□ 0.01
USB1-207ENST00000563149 SSRP1Q08945 709 aaKnown RBP15.09■□□□□ 0.01
USB1-207ENST00000563149 PIGBQ92521 554 aa15.09■□□□□ 0.01
USB1-207ENST00000563149 AIDAQ96BJ3 306 aa15.09■□□□□ 0.01
USB1-207ENST00000563149 PPP1R13BQ96KQ4 1090 aa15.09■□□□□ 0.01
USB1-207ENST00000563149 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.09■□□□□ 0.01
USB1-207ENST00000563149 KRT23Q9C075 422 aa15.09■□□□□ 0.01
USB1-207ENST00000563149 L2HGDHQ9H9P8 463 aa15.09■□□□□ 0.01
USB1-207ENST00000563149 MORC2Q9Y6X9 1032 aaPredicted RBP15.09■□□□□ 0.01
USB1-207ENST00000563149 XIRP1Q702N8 1843 aaKnown RBP15.09■□□□□ 0.01
USB1-207ENST00000563149 LRP5O75197 1615 aa15.09■□□□□ 0.01
USB1-207ENST00000563149 FMNL1O95466 1100 aaPredicted RBP15.08■□□□□ 0.01
USB1-207ENST00000563149 FGFR2P21802 821 aa15.08■□□□□ 0.01
USB1-207ENST00000563149 PUM3Q15397 648 aaKnown RBP15.08■□□□□ 0.01
USB1-207ENST00000563149 HLFQ16534 295 aa15.08■□□□□ 0.01
USB1-207ENST00000563149 TMEM67Q5HYA8 995 aa15.08■□□□□ 0.01
USB1-207ENST00000563149 NFXL1Q6ZNB6 911 aa15.08■□□□□ 0.01
USB1-207ENST00000563149 FCHSD1Q86WN1 690 aa15.08■□□□□ 0.01
USB1-207ENST00000563149 ZNF215Q9UL58 517 aaPredicted RBP15.08■□□□□ 0.01
USB1-207ENST00000563149 ASAP1Q9ULH1 1129 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms