RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 ZC3H15Q8WU90 426 aaKnown RBP22.71■■□□□ 1.23
RAB40C-207ENST00000563109 PCDHAC2Q9Y5I4 1007 aa22.71■■□□□ 1.23
RAB40C-207ENST00000563109 GPR75-ASB3A0A0A6YYF3 556 aa22.7■■□□□ 1.22
RAB40C-207ENST00000563109 TCRBV5S4A2TA0A5A2 114 aa22.7■■□□□ 1.22
RAB40C-207ENST00000563109 PLCG2P16885 1265 aa22.7■■□□□ 1.22
RAB40C-207ENST00000563109 SDSP20132 328 aa22.7■■□□□ 1.22
RAB40C-207ENST00000563109 BMP2KLQ5H9B9 411 aa22.7■■□□□ 1.22
RAB40C-207ENST00000563109 APOBEC3HQ6NTF7 200 aaKnown RBP22.7■■□□□ 1.22
RAB40C-207ENST00000563109 GGA3Q9NZ52 723 aa22.7■■□□□ 1.22
RAB40C-207ENST00000563109 CLRN2A0PK11 232 aa22.69■■□□□ 1.22
RAB40C-207ENST00000563109 HIP1O00291 1037 aa22.69■■□□□ 1.22
RAB40C-207ENST00000563109 ADGRA1Q86SQ6 560 aa22.69■■□□□ 1.22
RAB40C-207ENST00000563109 MIGA1Q8NAN2 632 aa22.69■■□□□ 1.22
RAB40C-207ENST00000563109 APPBP2Q92624 585 aa22.69■■□□□ 1.22
RAB40C-207ENST00000563109 DCPSQ96C86 337 aaKnown RBP22.69■■□□□ 1.22
RAB40C-207ENST00000563109 TDRD3Q9H7E2 651 aaKnown RBP22.69■■□□□ 1.22
RAB40C-207ENST00000563109 AATFQ9NY61 560 aaKnown RBP eCLIP22.69■■□□□ 1.22
RAB40C-207ENST00000563109 PITPNM2Q9BZ72 1349 aa22.68■■□□□ 1.22
RAB40C-207ENST00000563109 MAGEB6P1A0A0J9YX57 407 aa22.68■■□□□ 1.22
RAB40C-207ENST00000563109 KIF3CO14782 793 aa22.68■■□□□ 1.22
RAB40C-207ENST00000563109 SPDYE2Q495Y8 402 aa22.68■■□□□ 1.22
RAB40C-207ENST00000563109 ANGEL2Q5VTE6 544 aaKnown RBP22.68■■□□□ 1.22
RAB40C-207ENST00000563109 APOBEC3FQ8IUX4 373 aaKnown RBP22.68■■□□□ 1.22
RAB40C-207ENST00000563109 VEZTQ9HBM0 779 aa22.68■■□□□ 1.22
RAB40C-207ENST00000563109 DIAPH3Q9NSV4 1193 aa22.68■■□□□ 1.22
RAB40C-207ENST00000563109 USP40Q9NVE5 1235 aa22.68■■□□□ 1.22
RAB40C-207ENST00000563109 CDC42EP5Q6NZY7 148 aa22.67■■□□□ 1.22
RAB40C-207ENST00000563109 ZNF70Q9UC06 446 aaPredicted RBP22.67■■□□□ 1.22
RAB40C-207ENST00000563109 ASTN2O75129 1339 aaPredicted RBP22.66■■□□□ 1.22
RAB40C-207ENST00000563109 POTEIP0CG38 1075 aa22.66■■□□□ 1.22
RAB40C-207ENST00000563109 POTEJP0CG39 1038 aa22.66■■□□□ 1.22
RAB40C-207ENST00000563109 PPP4CP60510 307 aa22.66■■□□□ 1.22
RAB40C-207ENST00000563109 TNFAIP1Q13829 316 aa22.66■■□□□ 1.22
RAB40C-207ENST00000563109 AIDAQ96BJ3 306 aa22.66■■□□□ 1.22
RAB40C-207ENST00000563109 CDK5RAP2Q96SN8 1893 aa22.66■■□□□ 1.22
RAB40C-207ENST00000563109 FOCADQ5VW36 1801 aa22.66■■□□□ 1.22
RAB40C-207ENST00000563109 CHGBP05060 677 aa22.65■■□□□ 1.22
RAB40C-207ENST00000563109 TNNI2P48788 182 aa22.65■■□□□ 1.22
RAB40C-207ENST00000563109 SLFNL1Q499Z3 407 aa22.65■■□□□ 1.22
RAB40C-207ENST00000563109 ZMYM1Q5SVZ6 1142 aa22.65■■□□□ 1.22
RAB40C-207ENST00000563109 SULF1Q8IWU6 871 aa22.65■■□□□ 1.22
RAB40C-207ENST00000563109 TEX11Q8IYF3 940 aa22.65■■□□□ 1.22
RAB40C-207ENST00000563109 PGAP2Q9UHJ9 254 aa22.65■■□□□ 1.22
RAB40C-207ENST00000563109 MBD4O95243 580 aa22.64■■□□□ 1.21
RAB40C-207ENST00000563109 DYNLL1P63167 89 aaKnown RBP22.64■■□□□ 1.21
RAB40C-207ENST00000563109 CHADLQ6NUI6 762 aa22.64■■□□□ 1.21
RAB40C-207ENST00000563109 SH3RF3Q8TEJ3 882 aaPredicted RBP22.64■■□□□ 1.21
RAB40C-207ENST00000563109 RHBDL3P58872 404 aa22.63■■□□□ 1.21
RAB40C-207ENST00000563109 FKBP1CQ5VVH2 108 aa22.63■■□□□ 1.21
RAB40C-207ENST00000563109 OSBP2Q969R2 916 aa22.63■■□□□ 1.21
RAB40C-207ENST00000563109 RIOK1Q9BRS2 568 aaKnown RBP22.63■■□□□ 1.21
RAB40C-207ENST00000563109 CRNKL1Q9BZJ0 848 aaKnown RBP22.63■■□□□ 1.21
RAB40C-207ENST00000563109 PUS7LQ9H0K6 701 aaKnown RBP22.63■■□□□ 1.21
RAB40C-207ENST00000563109 HELLSQ9NRZ9 838 aa22.63■■□□□ 1.21
RAB40C-207ENST00000563109 POLR2AP24928 1970 aaKnown RBP22.63■■□□□ 1.21
RAB40C-207ENST00000563109 NAV1Q8NEY1 1877 aa22.62■■□□□ 1.21
RAB40C-207ENST00000563109 TCP10L2B9ZVM9 353 aa22.62■■□□□ 1.21
RAB40C-207ENST00000563109 TOMM70O94826 608 aa22.62■■□□□ 1.21
RAB40C-207ENST00000563109 CACNB3P54284 484 aa22.62■■□□□ 1.21
RAB40C-207ENST00000563109 NMIQ13287 307 aaPredicted RBP22.62■■□□□ 1.21
RAB40C-207ENST00000563109 MAP1SQ66K74 1059 aaPredicted RBP22.62■■□□□ 1.21
RAB40C-207ENST00000563109 KRT26Q7Z3Y9 468 aa22.62■■□□□ 1.21
RAB40C-207ENST00000563109 LCORLQ8N3X6 602 aa22.62■■□□□ 1.21
RAB40C-207ENST00000563109 SMC1BQ8NDV3 1235 aa22.62■■□□□ 1.21
RAB40C-207ENST00000563109 RBM46Q8TBY0 533 aaKnown RBP22.62■■□□□ 1.21
RAB40C-207ENST00000563109 ARMT1Q9H993 441 aa22.62■■□□□ 1.21
RAB40C-207ENST00000563109 M0R2C6 588 aa22.61■■□□□ 1.21
RAB40C-207ENST00000563109 USP5P45974 858 aa22.61■■□□□ 1.21
RAB40C-207ENST00000563109 PICALMQ13492 652 aa22.61■■□□□ 1.21
RAB40C-207ENST00000563109 CASC1Q6TDU7 716 aa22.61■■□□□ 1.21
RAB40C-207ENST00000563109 CDC37L1Q7L3B6 337 aa22.61■■□□□ 1.21
RAB40C-207ENST00000563109 RUFY2Q8WXA3 655 aa22.61■■□□□ 1.21
RAB40C-207ENST00000563109 FAM227BQ96M60 508 aa22.61■■□□□ 1.21
RAB40C-207ENST00000563109 IDI2Q9BXS1 227 aa22.61■■□□□ 1.21
RAB40C-207ENST00000563109 PPP2R3BQ9Y5P8 575 aa22.61■■□□□ 1.21
RAB40C-207ENST00000563109 A0A0D9SFI3 127 aa22.6■■□□□ 1.21
RAB40C-207ENST00000563109 GPAA1O43292 621 aa22.6■■□□□ 1.21
RAB40C-207ENST00000563109 WDHD1O75717 1129 aaPredicted RBP22.6■■□□□ 1.21
RAB40C-207ENST00000563109 MFAP1P55081 439 aaKnown RBP22.6■■□□□ 1.21
RAB40C-207ENST00000563109 MCMDC2Q4G0Z9 681 aa22.6■■□□□ 1.21
RAB40C-207ENST00000563109 CWC27Q6UX04 472 aaKnown RBP22.6■■□□□ 1.21
RAB40C-207ENST00000563109 FAM83AQ86UY5 434 aa22.6■■□□□ 1.21
RAB40C-207ENST00000563109 ADM5C9JUS6 153 aa22.59■■□□□ 1.21
RAB40C-207ENST00000563109 CDC45O75419 566 aa22.59■■□□□ 1.21
RAB40C-207ENST00000563109 GNAT2P19087 354 aa22.59■■□□□ 1.21
RAB40C-207ENST00000563109 CHMLP26374 656 aa22.59■■□□□ 1.21
RAB40C-207ENST00000563109 TGFBRAP1Q8WUH2 860 aa22.59■■□□□ 1.21
RAB40C-207ENST00000563109 DDRGK1Q96HY6 314 aa22.59■■□□□ 1.21
RAB40C-207ENST00000563109 SEC62Q99442 399 aaKnown RBP22.59■■□□□ 1.21
RAB40C-207ENST00000563109 RAD50Q92878 1312 aa22.58■■□□□ 1.21
RAB40C-207ENST00000563109 ENTPD3O75355 529 aa22.58■■□□□ 1.21
RAB40C-207ENST00000563109 NPM3O75607 178 aaKnown RBP22.58■■□□□ 1.21
RAB40C-207ENST00000563109 TCP10Q12799 353 aa22.58■■□□□ 1.21
RAB40C-207ENST00000563109 NFIAQ12857 509 aa22.58■■□□□ 1.21
RAB40C-207ENST00000563109 RASA3Q14644 834 aa22.58■■□□□ 1.21
RAB40C-207ENST00000563109 USP48Q86UV5 1035 aa22.58■■□□□ 1.21
RAB40C-207ENST00000563109 STRBPQ96SI9 672 aaKnown RBP22.58■■□□□ 1.21
RAB40C-207ENST00000563109 GLIS2Q9BZE0 524 aaPredicted RBP22.58■■□□□ 1.21
RAB40C-207ENST00000563109 DEFB129Q9H1M3 183 aa22.58■■□□□ 1.21
RAB40C-207ENST00000563109 SCAF8Q9UPN6 1271 aaKnown RBP22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms