RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 SLIT3O75094 1523 aa8.69□□□□□ -1.02
TCF4-216ENST00000562680 F8W031 263 aaPredicted RBP8.69□□□□□ -1.02
TCF4-216ENST00000562680 LZTS2Q9BRK4 669 aa8.69□□□□□ -1.02
TCF4-216ENST00000562680 ARMT1Q9H993 441 aa8.69□□□□□ -1.02
TCF4-216ENST00000562680 CBFA2T2O43439 604 aa8.69□□□□□ -1.02
TCF4-216ENST00000562680 SEC24BO95487 1268 aa8.69□□□□□ -1.02
TCF4-216ENST00000562680 KLHL40Q2TBA0 621 aa8.69□□□□□ -1.02
TCF4-216ENST00000562680 PCMTD1Q96MG8 357 aaPredicted RBP8.69□□□□□ -1.02
TCF4-216ENST00000562680 R3HCC1Q9Y3T6 440 aaKnown RBP8.69□□□□□ -1.02
TCF4-216ENST00000562680 UTYO14607 1347 aa8.69□□□□□ -1.02
TCF4-216ENST00000562680 PPEF1O14829 653 aaPredicted RBP8.69□□□□□ -1.02
TCF4-216ENST00000562680 SASH1O94885 1247 aa8.69□□□□□ -1.02
TCF4-216ENST00000562680 CCDC173Q0VFZ6 552 aa8.69□□□□□ -1.02
TCF4-216ENST00000562680 TEKT1Q969V4 418 aa8.69□□□□□ -1.02
TCF4-216ENST00000562680 ANO10Q9NW15 660 aa8.69□□□□□ -1.02
TCF4-216ENST00000562680 F13A1P00488 732 aa8.69□□□□□ -1.02
TCF4-216ENST00000562680 HLFQ16534 295 aa8.69□□□□□ -1.02
TCF4-216ENST00000562680 NAP1L4Q99733 375 aaKnown RBP8.69□□□□□ -1.02
TCF4-216ENST00000562680 PUS3Q9BZE2 481 aaKnown RBP8.69□□□□□ -1.02
TCF4-216ENST00000562680 LRRC27Q9C0I9 530 aa8.69□□□□□ -1.02
TCF4-216ENST00000562680 ATP8A2Q9NTI2 1148 aa8.69□□□□□ -1.02
TCF4-216ENST00000562680 NWD1Q149M9 1564 aa8.68□□□□□ -1.02
TCF4-216ENST00000562680 LMOD1P29536 600 aaPredicted RBP8.68□□□□□ -1.02
TCF4-216ENST00000562680 TXNRD1Q16881 649 aa8.68□□□□□ -1.02
TCF4-216ENST00000562680 AKNAD1Q5T1N1 836 aa8.68□□□□□ -1.02
TCF4-216ENST00000562680 DEF6Q9H4E7 631 aa8.68□□□□□ -1.02
TCF4-216ENST00000562680 PICALMQ13492 652 aa8.68□□□□□ -1.02
TCF4-216ENST00000562680 MFSD14BQ5SR56 506 aa8.68□□□□□ -1.02
TCF4-216ENST00000562680 NECAB1Q8N987 351 aa8.68□□□□□ -1.02
TCF4-216ENST00000562680 BANK1Q8NDB2 785 aa8.68□□□□□ -1.02
TCF4-216ENST00000562680 CALCOCO1Q9P1Z2 691 aa8.68□□□□□ -1.02
TCF4-216ENST00000562680 GNA11P29992 359 aa8.68□□□□□ -1.02
TCF4-216ENST00000562680 MAP4K1Q92918 833 aa8.68□□□□□ -1.02
TCF4-216ENST00000562680 TRIM5Q9C035 493 aa8.68□□□□□ -1.02
TCF4-216ENST00000562680 C6orf50Q9HD87 102 aa8.68□□□□□ -1.02
TCF4-216ENST00000562680 CWC15Q9P013 229 aaKnown RBP8.68□□□□□ -1.02
TCF4-216ENST00000562680 PPIP5K2O43314 1243 aa8.68□□□□□ -1.02
TCF4-216ENST00000562680 PHKA1P46020 1223 aa8.68□□□□□ -1.02
TCF4-216ENST00000562680 GTF2A1P52655 376 aaPredicted RBP8.68□□□□□ -1.02
TCF4-216ENST00000562680 RAB3GAP1Q15042 981 aa8.68□□□□□ -1.02
TCF4-216ENST00000562680 ZNF34Q8IZ26 560 aa8.68□□□□□ -1.02
TCF4-216ENST00000562680 MPHOSPH6Q99547 160 aaKnown RBP8.68□□□□□ -1.02
TCF4-216ENST00000562680 TCP11L1Q9NUJ3 509 aa8.68□□□□□ -1.02
TCF4-216ENST00000562680 PTPDC1A2A3K4 754 aa8.67□□□□□ -1.02
TCF4-216ENST00000562680 CCDC129Q6ZRS4 1044 aa8.67□□□□□ -1.02
TCF4-216ENST00000562680 TCEANC2Q96MN5 208 aa8.67□□□□□ -1.02
TCF4-216ENST00000562680 CEP89Q96ST8 783 aa8.67□□□□□ -1.02
TCF4-216ENST00000562680 A0A0D9SFI3 127 aa8.67□□□□□ -1.02
TCF4-216ENST00000562680 TNFAIP1Q13829 316 aa8.67□□□□□ -1.02
TCF4-216ENST00000562680 RRP36Q96EU6 259 aaKnown RBP8.67□□□□□ -1.02
TCF4-216ENST00000562680 MASTLQ96GX5 879 aa8.67□□□□□ -1.02
TCF4-216ENST00000562680 AKAP12Q02952 1782 aa8.67□□□□□ -1.02
TCF4-216ENST00000562680 CCP110O43303 1012 aa8.67□□□□□ -1.02
TCF4-216ENST00000562680 CLCN1P35523 988 aa8.67□□□□□ -1.02
TCF4-216ENST00000562680 APOBRQ0VD83 1088 aa8.67□□□□□ -1.02
TCF4-216ENST00000562680 CCDC82Q8N4S0 544 aa8.67□□□□□ -1.02
TCF4-216ENST00000562680 LRRC2Q9BYS8 371 aa8.67□□□□□ -1.02
TCF4-216ENST00000562680 KDM6AO15550 1401 aaPredicted RBP8.67□□□□□ -1.02
TCF4-216ENST00000562680 DEXIO95424 95 aa8.67□□□□□ -1.02
TCF4-216ENST00000562680 NEFHP12036 1026 aa8.67□□□□□ -1.02
TCF4-216ENST00000562680 GYG1P46976 350 aa8.67□□□□□ -1.02
TCF4-216ENST00000562680 TEX35Q5T0J7 233 aa8.67□□□□□ -1.02
TCF4-216ENST00000562680 ZNF274Q96GC6 653 aaPredicted RBP8.67□□□□□ -1.02
TCF4-216ENST00000562680 SRP68Q9UHB9 627 aaKnown RBP8.67□□□□□ -1.02
TCF4-216ENST00000562680 HSPD1P10809 573 aaKnown RBP8.67□□□□□ -1.02
TCF4-216ENST00000562680 EPS15P42566 896 aa8.67□□□□□ -1.02
TCF4-216ENST00000562680 BCAMP50895 628 aa8.67□□□□□ -1.02
TCF4-216ENST00000562680 AMPD3Q01432 767 aa8.67□□□□□ -1.02
TCF4-216ENST00000562680 GUCY1B3Q02153 619 aa8.67□□□□□ -1.02
TCF4-216ENST00000562680 SF3B3Q15393 1217 aaKnown RBP8.67□□□□□ -1.02
TCF4-216ENST00000562680 SMARCE1Q969G3 411 aa8.67□□□□□ -1.02
TCF4-216ENST00000562680 CHD2O14647 1828 aaKnown RBP8.66□□□□□ -1.02
TCF4-216ENST00000562680 ARID4AP29374 1257 aaPredicted RBP8.66□□□□□ -1.02
TCF4-216ENST00000562680 FSIP1Q8NA03 581 aa8.66□□□□□ -1.02
TCF4-216ENST00000562680 PI4K2BQ8TCG2 481 aa8.66□□□□□ -1.02
TCF4-216ENST00000562680 PIBF1Q8WXW3 757 aa8.66□□□□□ -1.02
TCF4-216ENST00000562680 ARHGEF1Q92888 912 aaKnown RBP8.66□□□□□ -1.02
TCF4-216ENST00000562680 ZSWIM6Q9HCJ5 1215 aa8.66□□□□□ -1.02
TCF4-216ENST00000562680 USP42Q9H9J4 1324 aaKnown RBP8.66□□□□□ -1.02
TCF4-216ENST00000562680 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.66□□□□□ -1.02
TCF4-216ENST00000562680 B4E1Z4 1266 aa8.66□□□□□ -1.02
TCF4-216ENST00000562680 TTLL12Q14166 644 aaPredicted RBP8.66□□□□□ -1.02
TCF4-216ENST00000562680 EPHA10Q5JZY3 1008 aa8.66□□□□□ -1.02
TCF4-216ENST00000562680 VEZTQ9HBM0 779 aa8.66□□□□□ -1.02
TCF4-216ENST00000562680 SEC31BQ9NQW1 1179 aa8.66□□□□□ -1.02
TCF4-216ENST00000562680 MRVI1Q9Y6F6 885 aa8.66□□□□□ -1.02
TCF4-216ENST00000562680 B4DLN1 442 aa8.66□□□□□ -1.02
TCF4-216ENST00000562680 KCNQ2O43526 872 aa8.66□□□□□ -1.02
TCF4-216ENST00000562680 ADD2P35612 726 aa8.66□□□□□ -1.02
TCF4-216ENST00000562680 MRPL12P52815 198 aaKnown RBP8.66□□□□□ -1.02
TCF4-216ENST00000562680 FAM182BQ5T319 152 aa8.66□□□□□ -1.02
TCF4-216ENST00000562680 IFNL3Q8IZI9 196 aa8.66□□□□□ -1.02
TCF4-216ENST00000562680 RNF214Q8ND24 703 aa8.66□□□□□ -1.02
TCF4-216ENST00000562680 COA1Q9GZY4 146 aa8.66□□□□□ -1.02
TCF4-216ENST00000562680 LSG1Q9H089 658 aaKnown RBP8.66□□□□□ -1.02
TCF4-216ENST00000562680 AATFQ9NY61 560 aaKnown RBP eCLIP8.66□□□□□ -1.02
TCF4-216ENST00000562680 E7EWF7 191 aa8.66□□□□□ -1.02
TCF4-216ENST00000562680 PARP1P09874 1014 aaKnown RBP8.66□□□□□ -1.02
TCF4-216ENST00000562680 GTF2IP78347 998 aa8.66□□□□□ -1.02
TCF4-216ENST00000562680 PPARAQ07869 468 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms