RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 ZAR1Q86SH2 424 aa8.07□□□□□ -1.12
SMG1-206ENST00000562668 EPS8L3Q8TE67 593 aaKnown RBP8.07□□□□□ -1.12
SMG1-206ENST00000562668 KRTAP9-2Q9BYQ4 174 aa8.07□□□□□ -1.12
SMG1-206ENST00000562668 RAD18Q9NS91 495 aa8.07□□□□□ -1.12
SMG1-206ENST00000562668 TIMELESSQ9UNS1 1208 aa8.07□□□□□ -1.12
SMG1-206ENST00000562668 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.06□□□□□ -1.12
SMG1-206ENST00000562668 BRD1O95696 1058 aa8.06□□□□□ -1.12
SMG1-206ENST00000562668 DYMQ7RTS9 669 aa8.06□□□□□ -1.12
SMG1-206ENST00000562668 TBC1D32Q96NH3 1257 aa8.06□□□□□ -1.12
SMG1-206ENST00000562668 WDR18Q9BV38 432 aa8.06□□□□□ -1.12
SMG1-206ENST00000562668 FAM105AQ9NUU6 356 aa8.06□□□□□ -1.12
SMG1-206ENST00000562668 BIN2Q9UBW5 565 aaPredicted RBP8.06□□□□□ -1.12
SMG1-206ENST00000562668 DCTN4Q9UJW0 460 aa8.06□□□□□ -1.12
SMG1-206ENST00000562668 AOC2O75106 756 aa8.05□□□□□ -1.12
SMG1-206ENST00000562668 FOSL1P15407 271 aa8.05□□□□□ -1.12
SMG1-206ENST00000562668 ADMP35318 185 aa8.05□□□□□ -1.12
SMG1-206ENST00000562668 IRAK1P51617 712 aa8.05□□□□□ -1.12
SMG1-206ENST00000562668 FAAP100Q0VG06 881 aa8.05□□□□□ -1.12
SMG1-206ENST00000562668 MAP7Q14244 749 aa8.05□□□□□ -1.12
SMG1-206ENST00000562668 MSMPQ1L6U9 139 aa8.05□□□□□ -1.12
SMG1-206ENST00000562668 SHISA5Q8N114 240 aa8.05□□□□□ -1.12
SMG1-206ENST00000562668 SEMA6CQ9H3T2 930 aa8.05□□□□□ -1.12
SMG1-206ENST00000562668 GSX1Q9H4S2 264 aaPredicted RBP8.05□□□□□ -1.12
SMG1-206ENST00000562668 ACSS3Q9H6R3 686 aa8.05□□□□□ -1.12
SMG1-206ENST00000562668 CADPSQ9ULU8 1353 aa8.05□□□□□ -1.12
SMG1-206ENST00000562668 CFTRP13569 1480 aa8.05□□□□□ -1.12
SMG1-206ENST00000562668 SYNGAP1Q96PV0 1343 aa8.04□□□□□ -1.12
SMG1-206ENST00000562668 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.04□□□□□ -1.12
SMG1-206ENST00000562668 GATA6Q92908 595 aa8.04□□□□□ -1.12
SMG1-206ENST00000562668 COL17A1Q9UMD9 1497 aaPredicted RBP8.04□□□□□ -1.12
SMG1-206ENST00000562668 PRDM2Q13029 1718 aa8.03□□□□□ -1.12
SMG1-206ENST00000562668 WNT11O96014 354 aa8.03□□□□□ -1.12
SMG1-206ENST00000562668 NFICP08651 508 aa8.03□□□□□ -1.12
SMG1-206ENST00000562668 PI16Q6UXB8 463 aa8.03□□□□□ -1.12
SMG1-206ENST00000562668 DTHD1Q6ZMT9 781 aa8.03□□□□□ -1.12
SMG1-206ENST00000562668 NLRP2Q9NX02 1062 aa8.03□□□□□ -1.12
SMG1-206ENST00000562668 KIF21AQ7Z4S6 1674 aa8.02□□□□□ -1.13
SMG1-206ENST00000562668 FAM170BA6NMN3 283 aa8.02□□□□□ -1.13
SMG1-206ENST00000562668 MAPK1P28482 360 aa8.02□□□□□ -1.13
SMG1-206ENST00000562668 ASPAP45381 313 aa8.02□□□□□ -1.13
SMG1-206ENST00000562668 ZNF157P51786 506 aaPredicted RBP8.02□□□□□ -1.13
SMG1-206ENST00000562668 FCGRTP55899 365 aa8.02□□□□□ -1.13
SMG1-206ENST00000562668 CCDC86Q9H6F5 360 aaKnown RBP8.02□□□□□ -1.13
SMG1-206ENST00000562668 GPN3Q9UHW5 284 aaPredicted RBP8.02□□□□□ -1.13
SMG1-206ENST00000562668 PNMA6FA0A0J9YX94 578 aa8.01□□□□□ -1.13
SMG1-206ENST00000562668 KRTAP9-6A0A140TA67 174 aa8.01□□□□□ -1.13
SMG1-206ENST00000562668 TMPRSS2O15393 492 aa8.01□□□□□ -1.13
SMG1-206ENST00000562668 TREHO43280 583 aa8.01□□□□□ -1.13
SMG1-206ENST00000562668 XRCC5P13010 732 aaKnown RBP8.01□□□□□ -1.13
SMG1-206ENST00000562668 HNRNPUQ00839 825 aaKnown RBP eCLIP8.01□□□□□ -1.13
SMG1-206ENST00000562668 DSC3Q14574 896 aa8.01□□□□□ -1.13
SMG1-206ENST00000562668 BCO2Q9BYV7 579 aa8.01□□□□□ -1.13
SMG1-206ENST00000562668 KRT82Q9NSB4 513 aa8.01□□□□□ -1.13
SMG1-206ENST00000562668 PPP1R9AQ9ULJ8 1098 aa8.01□□□□□ -1.13
SMG1-206ENST00000562668 ANGEL1Q9UNK9 670 aaKnown RBP8.01□□□□□ -1.13
SMG1-206ENST00000562668 CYP26A1O43174 497 aa8□□□□□ -1.13
SMG1-206ENST00000562668 PRNPP04156 253 aa8□□□□□ -1.13
SMG1-206ENST00000562668 GSTP1P09211 210 aaKnown RBP8□□□□□ -1.13
SMG1-206ENST00000562668 LIG1P18858 919 aa8□□□□□ -1.13
SMG1-206ENST00000562668 PPP2R3AQ06190 1150 aa8□□□□□ -1.13
SMG1-206ENST00000562668 ENOX2Q16206 610 aaKnown RBP8□□□□□ -1.13
SMG1-206ENST00000562668 VSIG10LQ86VR7 867 aa8□□□□□ -1.13
SMG1-206ENST00000562668 DAGLAQ9Y4D2 1042 aa8□□□□□ -1.13
SMG1-206ENST00000562668 CYP27A1Q02318 531 aa7.99□□□□□ -1.13
SMG1-206ENST00000562668 SEZ6L2Q6UXD5 910 aa7.99□□□□□ -1.13
SMG1-206ENST00000562668 ZNF765Q7L2R6 523 aa7.99□□□□□ -1.13
SMG1-206ENST00000562668 THOC2Q8NI27 1593 aaKnown RBP7.99□□□□□ -1.13
SMG1-206ENST00000562668 WDR89Q96FK6 387 aaPredicted RBP7.99□□□□□ -1.13
SMG1-206ENST00000562668 ZC3H12CQ9C0D7 883 aaKnown RBP7.99□□□□□ -1.13
SMG1-206ENST00000562668 TMEM39AQ9NV64 488 aa7.99□□□□□ -1.13
SMG1-206ENST00000562668 PPP4R2Q9NY27 417 aa7.99□□□□□ -1.13
SMG1-206ENST00000562668 CRIM1Q9NZV1 1036 aa7.99□□□□□ -1.13
SMG1-206ENST00000562668 DYNC1LI2O43237 492 aaPredicted RBP7.98□□□□□ -1.13
SMG1-206ENST00000562668 ZNF862O60290 1169 aa7.98□□□□□ -1.13
SMG1-206ENST00000562668 ID3Q02535 119 aa7.98□□□□□ -1.13
SMG1-206ENST00000562668 KIF4BQ2VIQ3 1234 aa7.98□□□□□ -1.13
SMG1-206ENST00000562668 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.98□□□□□ -1.13
SMG1-206ENST00000562668 DUSP27Q5VZP5 1158 aa7.98□□□□□ -1.13
SMG1-206ENST00000562668 ATXN3LQ9H3M9 355 aa7.98□□□□□ -1.13
SMG1-206ENST00000562668 C1GALT1Q9NS00 363 aa7.98□□□□□ -1.13
SMG1-206ENST00000562668 CCDC39Q9UFE4 941 aa7.98□□□□□ -1.13
SMG1-206ENST00000562668 PCDHGC5Q9Y5F6 944 aa7.98□□□□□ -1.13
SMG1-206ENST00000562668 PAX4O43316 350 aa7.97□□□□□ -1.13
SMG1-206ENST00000562668 PDZD3Q86UT5 571 aa7.97□□□□□ -1.13
SMG1-206ENST00000562668 PIDD1Q9HB75 910 aa7.97□□□□□ -1.13
SMG1-206ENST00000562668 BSDC1Q9NW68 430 aaPredicted RBP7.97□□□□□ -1.13
SMG1-206ENST00000562668 PDS5BQ9NTI5 1447 aa7.96□□□□□ -1.13
SMG1-206ENST00000562668 SLFN14P0C7P3 912 aa7.96□□□□□ -1.14
SMG1-206ENST00000562668 TAL1P17542 331 aaPredicted RBP7.96□□□□□ -1.14
SMG1-206ENST00000562668 PLCB3Q01970 1234 aa7.96□□□□□ -1.14
SMG1-206ENST00000562668 NXPE4Q6UWF7 544 aa7.96□□□□□ -1.14
SMG1-206ENST00000562668 SULF2Q8IWU5 870 aa7.96□□□□□ -1.14
SMG1-206ENST00000562668 ABI1Q8IZP0 508 aa7.96□□□□□ -1.14
SMG1-206ENST00000562668 FBF1Q8TES7 1133 aa7.96□□□□□ -1.14
SMG1-206ENST00000562668 FANCD2OSQ96PS1 177 aa7.96□□□□□ -1.14
SMG1-206ENST00000562668 KRTAP4-12Q9BQ66 201 aa7.96□□□□□ -1.14
SMG1-206ENST00000562668 LRRC4CQ9HCJ2 640 aa7.96□□□□□ -1.14
SMG1-206ENST00000562668 ADGRE2Q9UHX3 823 aa7.96□□□□□ -1.14
SMG1-206ENST00000562668 FANCD2Q9BXW9 1451 aa7.95□□□□□ -1.14
SMG1-206ENST00000562668 FMR1Q06787 632 aaKnown RBP eCLIP7.95□□□□□ -1.145e-8■■■□□ 16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms