RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 EPB41L4AQ9HCS5 686 aaPredicted RBP16.96■□□□□ 0.31
COMMD4-205ENST00000562310 CDK5RAP2Q96SN8 1893 aa16.96■□□□□ 0.31
COMMD4-205ENST00000562310 FOCADQ5VW36 1801 aa16.96■□□□□ 0.3
COMMD4-205ENST00000562310 E7EWF7 191 aa16.95■□□□□ 0.3
COMMD4-205ENST00000562310 PPP4CP60510 307 aa16.95■□□□□ 0.3
COMMD4-205ENST00000562310 AOC3Q16853 763 aa16.95■□□□□ 0.3
COMMD4-205ENST00000562310 STRIP1Q5VSL9 837 aa16.95■□□□□ 0.3
COMMD4-205ENST00000562310 TTLL5Q6EMB2 1281 aa16.95■□□□□ 0.3
COMMD4-205ENST00000562310 FBXW7Q969H0 707 aa16.95■□□□□ 0.3
COMMD4-205ENST00000562310 FAM163AQ96GL9 167 aaPredicted RBP16.95■□□□□ 0.3
COMMD4-205ENST00000562310 DBNDD1Q9H9R9 158 aa16.95■□□□□ 0.3
COMMD4-205ENST00000562310 ATP8A2Q9NTI2 1148 aa16.95■□□□□ 0.3
COMMD4-205ENST00000562310 TAF6LQ9Y6J9 622 aa16.95■□□□□ 0.3
COMMD4-205ENST00000562310 BAZ2AQ9UIF9 1905 aaKnown RBP16.95■□□□□ 0.3
COMMD4-205ENST00000562310 GAKO14976 1311 aa16.95■□□□□ 0.3
COMMD4-205ENST00000562310 WDR19Q8NEZ3 1342 aa16.95■□□□□ 0.3
COMMD4-205ENST00000562310 AK2P54819 239 aa16.94■□□□□ 0.3
COMMD4-205ENST00000562310 DYNLL1P63167 89 aaKnown RBP16.94■□□□□ 0.3
COMMD4-205ENST00000562310 STOX1Q6ZVD7 989 aa16.94■□□□□ 0.3
COMMD4-205ENST00000562310 ZSCAN31Q96LW9 406 aaPredicted RBP16.94■□□□□ 0.3
COMMD4-205ENST00000562310 AATFQ9NY61 560 aaKnown RBP eCLIP16.94■□□□□ 0.3
COMMD4-205ENST00000562310 PPP1R1BQ9UD71 204 aaPredicted RBP16.94■□□□□ 0.3
COMMD4-205ENST00000562310 LIMCH1Q9UPQ0 1083 aa16.94■□□□□ 0.3
COMMD4-205ENST00000562310 DDX60LQ5H9U9 1706 aaKnown RBP16.93■□□□□ 0.3
COMMD4-205ENST00000562310 USP17L3A6NCW0 530 aa16.93■□□□□ 0.3
COMMD4-205ENST00000562310 USP17L4A6NCW7 530 aa16.93■□□□□ 0.3
COMMD4-205ENST00000562310 PRKAB2O43741 272 aa16.93■□□□□ 0.3
COMMD4-205ENST00000562310 TRDNQ13061 729 aa16.93■□□□□ 0.3
COMMD4-205ENST00000562310 DHX32Q7L7V1 743 aaKnown RBP16.93■□□□□ 0.3
COMMD4-205ENST00000562310 USP17L1Q7RTZ2 530 aa16.93■□□□□ 0.3
COMMD4-205ENST00000562310 RALYLQ86SE5 291 aaKnown RBP16.93■□□□□ 0.3
COMMD4-205ENST00000562310 NCOA7Q8NI08 942 aa16.93■□□□□ 0.3
COMMD4-205ENST00000562310 TMX3Q96JJ7 454 aa16.93■□□□□ 0.3
COMMD4-205ENST00000562310 SH2B1Q9NRF2 756 aaPredicted RBP16.93■□□□□ 0.3
COMMD4-205ENST00000562310 ECM29Q5VYK3 1845 aa16.92■□□□□ 0.3
COMMD4-205ENST00000562310 GPR75-ASB3A0A0A6YYF3 556 aa16.92■□□□□ 0.3
COMMD4-205ENST00000562310 HAND2P61296 217 aa16.92■□□□□ 0.3
COMMD4-205ENST00000562310 DIXDC1Q155Q3 683 aa16.92■□□□□ 0.3
COMMD4-205ENST00000562310 GRIK5Q16478 980 aa16.92■□□□□ 0.3
COMMD4-205ENST00000562310 KLHL34Q8N239 644 aa16.92■□□□□ 0.3
COMMD4-205ENST00000562310 RNF41Q9H4P4 317 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-205ENST00000562310 CNNM2Q9H8M5 875 aa16.92■□□□□ 0.3
COMMD4-205ENST00000562310 ANAPC4Q9UJX5 808 aa16.92■□□□□ 0.3
COMMD4-205ENST00000562310 MYO3BQ8WXR4 1341 aa16.92■□□□□ 0.3
COMMD4-205ENST00000562310 PCP11498 1178 aaKnown RBP16.91■□□□□ 0.3
COMMD4-205ENST00000562310 CPA1P15085 419 aa16.91■□□□□ 0.3
COMMD4-205ENST00000562310 HDLBPQ00341 1268 aaKnown RBP16.91■□□□□ 0.3
COMMD4-205ENST00000562310 CUL4AQ13619 759 aa16.91■□□□□ 0.3
COMMD4-205ENST00000562310 DACT2Q5SW24 774 aa16.91■□□□□ 0.3
COMMD4-205ENST00000562310 LARGE2Q8N3Y3 721 aa16.91■□□□□ 0.3
COMMD4-205ENST00000562310 CERS5Q8N5B7 392 aa16.91■□□□□ 0.3
COMMD4-205ENST00000562310 SDR42E1Q8WUS8 393 aa16.91■□□□□ 0.3
COMMD4-205ENST00000562310 INTS4Q96HW7 963 aaKnown RBP16.91■□□□□ 0.3
COMMD4-205ENST00000562310 TAOK3Q9H2K8 898 aa16.91■□□□□ 0.3
COMMD4-205ENST00000562310 ARPP21Q9UBL0 812 aaPredicted RBP16.91■□□□□ 0.3
COMMD4-205ENST00000562310 CIZ1Q9ULV3 898 aaPredicted RBP16.91■□□□□ 0.3
COMMD4-205ENST00000562310 LTBP3Q9NS15 1303 aa16.91■□□□□ 0.3
COMMD4-205ENST00000562310 MCM5P33992 734 aa16.9■□□□□ 0.3
COMMD4-205ENST00000562310 BTDP43251 543 aa16.9■□□□□ 0.3
COMMD4-205ENST00000562310 NT5C2P49902 561 aa16.9■□□□□ 0.3
COMMD4-205ENST00000562310 PPARAQ07869 468 aa16.9■□□□□ 0.3
COMMD4-205ENST00000562310 HHIPL2Q6UWX4 724 aa16.9■□□□□ 0.3
COMMD4-205ENST00000562310 TBC1D10CQ8IV04 446 aa16.9■□□□□ 0.3
COMMD4-205ENST00000562310 AMOTL1Q8IY63 956 aa16.9■□□□□ 0.3
COMMD4-205ENST00000562310 NIM1KQ8IY84 436 aa16.9■□□□□ 0.3
COMMD4-205ENST00000562310 MB21D2Q8IYB1 491 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-205ENST00000562310 FBXL16Q8N461 479 aa16.9■□□□□ 0.3
COMMD4-205ENST00000562310 STAG1Q8WVM7 1258 aa16.9■□□□□ 0.3
COMMD4-205ENST00000562310 MRIQ9BWK5 157 aa16.9■□□□□ 0.3
COMMD4-205ENST00000562310 KRT23Q9C075 422 aa16.9■□□□□ 0.3
COMMD4-205ENST00000562310 NBPF3Q9H094 633 aa16.9■□□□□ 0.3
COMMD4-205ENST00000562310 TTF2Q9UNY4 1162 aaKnown RBP16.9■□□□□ 0.3
COMMD4-205ENST00000562310 IARSP41252 1262 aaKnown RBP16.89■□□□□ 0.29
COMMD4-205ENST00000562310 USP5P45974 858 aa16.89■□□□□ 0.29
COMMD4-205ENST00000562310 FGD1P98174 961 aa16.89■□□□□ 0.29
COMMD4-205ENST00000562310 EXOSC10Q01780 885 aaKnown RBP16.89■□□□□ 0.29
COMMD4-205ENST00000562310 SBK1Q52WX2 424 aa16.89■□□□□ 0.29
COMMD4-205ENST00000562310 AKNAD1Q5T1N1 836 aa16.89■□□□□ 0.29
COMMD4-205ENST00000562310 NOL8Q76FK4 1167 aaKnown RBP16.89■□□□□ 0.29
COMMD4-205ENST00000562310 TEKT1Q969V4 418 aa16.89■□□□□ 0.29
COMMD4-205ENST00000562310 SLKQ9H2G2 1235 aaPredicted RBP16.89■□□□□ 0.29
COMMD4-205ENST00000562310 CWC22Q9HCG8 908 aaKnown RBP16.89■□□□□ 0.29
COMMD4-205ENST00000562310 DCP1AQ9NPI6 582 aaPredicted RBP16.89■□□□□ 0.29
COMMD4-205ENST00000562310 DAGLAQ9Y4D2 1042 aa16.89■□□□□ 0.29
COMMD4-205ENST00000562310 ADAMTSL1Q8N6G6 1762 aa16.89■□□□□ 0.29
COMMD4-205ENST00000562310 MYH1P12882 1939 aa16.88■□□□□ 0.29
COMMD4-205ENST00000562310 SLC3A2P08195 630 aaKnown RBP16.88■□□□□ 0.29
COMMD4-205ENST00000562310 MFSD6Q6ZSS7 791 aa16.88■□□□□ 0.29
COMMD4-205ENST00000562310 Q6ZUG5 572 aa16.88■□□□□ 0.29
COMMD4-205ENST00000562310 SH3RF3Q8TEJ3 882 aaPredicted RBP16.88■□□□□ 0.29
COMMD4-205ENST00000562310 AGXT2Q9BYV1 514 aa16.88■□□□□ 0.29
COMMD4-205ENST00000562310 ZNF277Q9NRM2 450 aaPredicted RBP16.88■□□□□ 0.29
COMMD4-205ENST00000562310 CHMP5Q9NZZ3 219 aa16.88■□□□□ 0.29
COMMD4-205ENST00000562310 COL4A5P29400 1685 aa16.88■□□□□ 0.29
COMMD4-205ENST00000562310 TOB2Q14106 344 aaPredicted RBP16.87■□□□□ 0.29
COMMD4-205ENST00000562310 TEX11Q8IYF3 940 aa16.87■□□□□ 0.29
COMMD4-205ENST00000562310 SPRYD3Q8NCJ5 442 aa16.87■□□□□ 0.29
COMMD4-205ENST00000562310 MTA3Q9BTC8 594 aa16.87■□□□□ 0.29
COMMD4-205ENST00000562310 ZNRF3Q9ULT6 936 aa16.87■□□□□ 0.29
COMMD4-205ENST00000562310 BCS1LQ9Y276 419 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms