RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 SP8Q8IXZ3 490 aa19.53■□□□□ 0.72
PKD1-225ENST00000562297 SDR42E1Q8WUS8 393 aa19.53■□□□□ 0.72
PKD1-225ENST00000562297 LLPHQ9BRT6 129 aaKnown RBP19.53■□□□□ 0.72
PKD1-225ENST00000562297 INCENPQ9NQS7 918 aa19.53■□□□□ 0.72
PKD1-225ENST00000562297 PARP3Q9Y6F1 533 aa19.53■□□□□ 0.72
PKD1-225ENST00000562297 PPEF1O14829 653 aaPredicted RBP19.52■□□□□ 0.72
PKD1-225ENST00000562297 NPR1P16066 1061 aa19.52■□□□□ 0.72
PKD1-225ENST00000562297 TDO2P48775 406 aa19.52■□□□□ 0.72
PKD1-225ENST00000562297 CTDSPL2Q05D32 466 aa19.52■□□□□ 0.72
PKD1-225ENST00000562297 BRPF3Q9ULD4 1205 aa19.52■□□□□ 0.72
PKD1-225ENST00000562297 ATP6V0A2Q9Y487 856 aa19.52■□□□□ 0.72
PKD1-225ENST00000562297 B4E1Z4 1266 aa19.52■□□□□ 0.72
PKD1-225ENST00000562297 LARP1BQ659C4 914 aaKnown RBP19.52■□□□□ 0.72
PKD1-225ENST00000562297 NSUN7Q8NE18 718 aaKnown RBP19.52■□□□□ 0.72
PKD1-225ENST00000562297 WDR66Q8TBY9 1149 aa19.52■□□□□ 0.72
PKD1-225ENST00000562297 MYH2Q9UKX2 1941 aa19.52■□□□□ 0.71
PKD1-225ENST00000562297 IGSF3O75054 1194 aa19.51■□□□□ 0.71
PKD1-225ENST00000562297 PDIA4P13667 645 aaKnown RBP19.51■□□□□ 0.71
PKD1-225ENST00000562297 IL1R1P14778 569 aa19.51■□□□□ 0.71
PKD1-225ENST00000562297 PDCP20941 246 aa19.51■□□□□ 0.71
PKD1-225ENST00000562297 PDE6BP35913 854 aa19.51■□□□□ 0.71
PKD1-225ENST00000562297 AKNAD1Q5T1N1 836 aa19.51■□□□□ 0.71
PKD1-225ENST00000562297 STAG1Q8WVM7 1258 aa19.51■□□□□ 0.71
PKD1-225ENST00000562297 CD209Q9NNX6 404 aa19.51■□□□□ 0.71
PKD1-225ENST00000562297 LAMB1P07942 1786 aa19.51■□□□□ 0.71
PKD1-225ENST00000562297 KLHL40Q2TBA0 621 aa19.51■□□□□ 0.71
PKD1-225ENST00000562297 SPTY2D1Q68D10 685 aaPredicted RBP19.51■□□□□ 0.71
PKD1-225ENST00000562297 NCOA5Q9HCD5 579 aaKnown RBP19.51■□□□□ 0.71
PKD1-225ENST00000562297 HPS5Q9UPZ3 1129 aa19.51■□□□□ 0.71
PKD1-225ENST00000562297 PRPF40AO75400 957 aaKnown RBP19.5■□□□□ 0.71
PKD1-225ENST00000562297 CCT2P78371 535 aaKnown RBP19.5■□□□□ 0.71
PKD1-225ENST00000562297 ANAPC4Q9UJX5 808 aa19.5■□□□□ 0.71
PKD1-225ENST00000562297 CDK5RAP2Q96SN8 1893 aa19.49■□□□□ 0.71
PKD1-225ENST00000562297 SH2B2O14492 632 aaPredicted RBP19.49■□□□□ 0.71
PKD1-225ENST00000562297 GRIK5Q16478 980 aa19.49■□□□□ 0.71
PKD1-225ENST00000562297 CDC37L1Q7L3B6 337 aa19.49■□□□□ 0.71
PKD1-225ENST00000562297 GZF1Q9H116 711 aaPredicted RBP19.49■□□□□ 0.71
PKD1-225ENST00000562297 ANGEL1Q9UNK9 670 aaKnown RBP19.49■□□□□ 0.71
PKD1-225ENST00000562297 PPARAQ07869 468 aa19.49■□□□□ 0.71
PKD1-225ENST00000562297 GIMAP6Q6P9H5 292 aa19.49■□□□□ 0.71
PKD1-225ENST00000562297 IGDCC4Q8TDY8 1250 aa19.49■□□□□ 0.71
PKD1-225ENST00000562297 CNNM2Q9H8M5 875 aa19.49■□□□□ 0.71
PKD1-225ENST00000562297 AATFQ9NY61 560 aaKnown RBP eCLIP19.49■□□□□ 0.71
PKD1-225ENST00000562297 ZSWIM5Q9P217 1185 aa19.49■□□□□ 0.71
PKD1-225ENST00000562297 KLF18A0A0U1RQI7 1052 aa19.48■□□□□ 0.71
PKD1-225ENST00000562297 VPS37CA5D8V6 355 aaPredicted RBP19.48■□□□□ 0.71
PKD1-225ENST00000562297 FOXD4L6Q3SYB3 417 aaPredicted RBP19.48■□□□□ 0.71
PKD1-225ENST00000562297 FOXD4L3Q6VB84 417 aaPredicted RBP19.48■□□□□ 0.71
PKD1-225ENST00000562297 MFSD6Q6ZSS7 791 aa19.48■□□□□ 0.71
PKD1-225ENST00000562297 TMEM87BQ96K49 555 aa19.48■□□□□ 0.71
PKD1-225ENST00000562297 DDX49Q9Y6V7 483 aaKnown RBP19.48■□□□□ 0.71
PKD1-225ENST00000562297 PTPDC1A2A3K4 754 aa19.47■□□□□ 0.71
PKD1-225ENST00000562297 SMIM22K7EJ46 135 aa19.47■□□□□ 0.71
PKD1-225ENST00000562297 LDHBP07195 334 aaKnown RBP19.47■□□□□ 0.71
PKD1-225ENST00000562297 ALDH1B1P30837 517 aa19.47■□□□□ 0.71
PKD1-225ENST00000562297 OLFM4Q6UX06 510 aa19.47■□□□□ 0.71
PKD1-225ENST00000562297 DZIP1Q86YF9 867 aaKnown RBP19.47■□□□□ 0.71
PKD1-225ENST00000562297 MASTLQ96GX5 879 aa19.47■□□□□ 0.71
PKD1-225ENST00000562297 KRT23Q9C075 422 aa19.47■□□□□ 0.71
PKD1-225ENST00000562297 KDM4AO75164 1064 aa19.47■□□□□ 0.71
PKD1-225ENST00000562297 GPT2Q8TD30 523 aa19.47■□□□□ 0.71
PKD1-225ENST00000562297 DDX11Q96FC9 970 aa19.47■□□□□ 0.71
PKD1-225ENST00000562297 SENP2Q9HC62 589 aa19.47■□□□□ 0.71
PKD1-225ENST00000562297 STK32BQ9NY57 414 aa19.47■□□□□ 0.71
PKD1-225ENST00000562297 SLX4Q8IY92 1834 aa19.46■□□□□ 0.71
PKD1-225ENST00000562297 GOLGA8BA8MQT2 603 aa19.46■□□□□ 0.71
PKD1-225ENST00000562297 C6orf229H3BNL8 230 aa19.46■□□□□ 0.71
PKD1-225ENST00000562297 HMGN5P82970 282 aaKnown RBP19.46■□□□□ 0.71
PKD1-225ENST00000562297 SGMS1Q86VZ5 419 aa19.46■□□□□ 0.71
PKD1-225ENST00000562297 TMEM87AQ8NBN3 555 aa19.46■□□□□ 0.71
PKD1-225ENST00000562297 LY9Q9HBG7 655 aa19.46■□□□□ 0.71
PKD1-225ENST00000562297 NAP1L2Q9ULW6 460 aaPredicted RBP19.46■□□□□ 0.71
PKD1-225ENST00000562297 ATP6V1DQ9Y5K8 247 aa19.46■□□□□ 0.71
PKD1-225ENST00000562297 RNF41Q9H4P4 317 aaPredicted RBP19.46■□□□□ 0.71
PKD1-225ENST00000562297 DCP1AQ9NPI6 582 aaPredicted RBP19.46■□□□□ 0.71
PKD1-225ENST00000562297 MYH15Q9Y2K3 1946 aa19.45■□□□□ 0.7
PKD1-225ENST00000562297 MINDY4BA8MYZ0 360 aa19.45■□□□□ 0.7
PKD1-225ENST00000562297 LIFRP42702 1097 aa19.45■□□□□ 0.7
PKD1-225ENST00000562297 CTR9Q6PD62 1173 aa19.45■□□□□ 0.7
PKD1-225ENST00000562297 CHMP4CQ96CF2 233 aa19.45■□□□□ 0.7
PKD1-225ENST00000562297 CRNKL1Q9BZJ0 848 aaKnown RBP19.45■□□□□ 0.7
PKD1-225ENST00000562297 CYP2D7A0A087X1C5 515 aa19.44■□□□□ 0.7
PKD1-225ENST00000562297 FGRP09769 529 aa19.44■□□□□ 0.7
PKD1-225ENST00000562297 FDPSP14324 419 aaKnown RBP19.44■□□□□ 0.7
PKD1-225ENST00000562297 DIXDC1Q155Q3 683 aa19.44■□□□□ 0.7
PKD1-225ENST00000562297 APOA5Q6Q788 366 aa19.44■□□□□ 0.7
PKD1-225ENST00000562297 GDPD2Q9HCC8 539 aa19.44■□□□□ 0.7
PKD1-225ENST00000562297 ATP8A2Q9NTI2 1148 aa19.44■□□□□ 0.7
PKD1-225ENST00000562297 CNPY2Q9Y2B0 182 aa19.44■□□□□ 0.7
PKD1-225ENST00000562297 MKRN1Q9UHC7 482 aaKnown RBP19.44■□□□□ 0.7
PKD1-225ENST00000562297 FAM205AQ6ZU69 1335 aa19.44■□□□□ 0.7
PKD1-225ENST00000562297 PPP4CP60510 307 aa19.43■□□□□ 0.7
PKD1-225ENST00000562297 TMEM67Q5HYA8 995 aa19.43■□□□□ 0.7
PKD1-225ENST00000562297 USP48Q86UV5 1035 aa19.43■□□□□ 0.7
PKD1-225ENST00000562297 FERMT3Q86UX7 667 aa19.43■□□□□ 0.7
PKD1-225ENST00000562297 RAB11FIP4Q86YS3 637 aa19.43■□□□□ 0.7
PKD1-225ENST00000562297 C2CD5Q86YS7 1000 aa19.43■□□□□ 0.7
PKD1-225ENST00000562297 MPNDQ8N594 471 aa19.43■□□□□ 0.7
PKD1-225ENST00000562297 MTA3Q9BTC8 594 aa19.43■□□□□ 0.7
PKD1-225ENST00000562297 DLEC1Q9Y238 1755 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms