RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 C15orf52Q6ZUT6 534 aaKnown RBP12.04□□□□□ -0.48
TUBGCP4-202ENST00000561691 INCENPQ9NQS7 918 aa12.04□□□□□ -0.48
TUBGCP4-202ENST00000561691 PRC1O43663 620 aa12.03□□□□□ -0.48
TUBGCP4-202ENST00000561691 CSPP1Q1MSJ5 1256 aa12.03□□□□□ -0.48
TUBGCP4-202ENST00000561691 CAVIN4Q5BKX8 364 aa12.03□□□□□ -0.48
TUBGCP4-202ENST00000561691 SASS6Q6UVJ0 657 aa12.03□□□□□ -0.48
TUBGCP4-202ENST00000561691 CDC37L1Q7L3B6 337 aa12.03□□□□□ -0.48
TUBGCP4-202ENST00000561691 COL23A1Q86Y22 540 aaPredicted RBP12.03□□□□□ -0.48
TUBGCP4-202ENST00000561691 MIGA1Q8NAN2 632 aa12.03□□□□□ -0.48
TUBGCP4-202ENST00000561691 GNL3LQ9NVN8 582 aaKnown RBP12.03□□□□□ -0.48
TUBGCP4-202ENST00000561691 ANKRD31Q8N7Z5 1873 aa12.03□□□□□ -0.48
TUBGCP4-202ENST00000561691 LRRC37AA6NMS7 1700 aa12.03□□□□□ -0.48
TUBGCP4-202ENST00000561691 SMIM22K7EJ46 135 aa12.03□□□□□ -0.48
TUBGCP4-202ENST00000561691 GADD45BO75293 160 aaPredicted RBP12.03□□□□□ -0.48
TUBGCP4-202ENST00000561691 LETM1O95202 739 aaPredicted RBP12.03□□□□□ -0.48
TUBGCP4-202ENST00000561691 CYP7A1P22680 504 aa12.03□□□□□ -0.48
TUBGCP4-202ENST00000561691 HIBADHP31937 336 aaKnown RBP12.03□□□□□ -0.48
TUBGCP4-202ENST00000561691 NCOA7Q8NI08 942 aa12.03□□□□□ -0.48
TUBGCP4-202ENST00000561691 NSUN4Q96CB9 384 aaKnown RBP12.03□□□□□ -0.48
TUBGCP4-202ENST00000561691 LLPHQ9BRT6 129 aaKnown RBP12.03□□□□□ -0.48
TUBGCP4-202ENST00000561691 GDPD2Q9HCC8 539 aa12.03□□□□□ -0.48
TUBGCP4-202ENST00000561691 NCOA5Q9HCD5 579 aaKnown RBP12.03□□□□□ -0.48
TUBGCP4-202ENST00000561691 LRP2BPQ9P2M1 347 aa12.03□□□□□ -0.48
TUBGCP4-202ENST00000561691 DDX49Q9Y6V7 483 aaKnown RBP12.03□□□□□ -0.48
TUBGCP4-202ENST00000561691 FDPSP14324 419 aaKnown RBP12.02□□□□□ -0.49
TUBGCP4-202ENST00000561691 MCM5P33992 734 aa12.02□□□□□ -0.49
TUBGCP4-202ENST00000561691 GPSM2P81274 684 aa12.02□□□□□ -0.49
TUBGCP4-202ENST00000561691 LARP1BQ659C4 914 aaKnown RBP12.02□□□□□ -0.49
TUBGCP4-202ENST00000561691 USP48Q86UV5 1035 aa12.02□□□□□ -0.49
TUBGCP4-202ENST00000561691 PDLIM2Q96JY6 352 aa12.02□□□□□ -0.49
TUBGCP4-202ENST00000561691 SENP2Q9HC62 589 aa12.02□□□□□ -0.49
TUBGCP4-202ENST00000561691 CNPY2Q9Y2B0 182 aa12.02□□□□□ -0.49
TUBGCP4-202ENST00000561691 SH2B2O14492 632 aaPredicted RBP12.01□□□□□ -0.49
TUBGCP4-202ENST00000561691 DYNLL1P63167 89 aaKnown RBP12.01□□□□□ -0.49
TUBGCP4-202ENST00000561691 FOXD4L6Q3SYB3 417 aaPredicted RBP12.01□□□□□ -0.49
TUBGCP4-202ENST00000561691 FOXD4L3Q6VB84 417 aaPredicted RBP12.01□□□□□ -0.49
TUBGCP4-202ENST00000561691 TDRD7Q8NHU6 1098 aaKnown RBP12.01□□□□□ -0.49
TUBGCP4-202ENST00000561691 IGDCC4Q8TDY8 1250 aa12.01□□□□□ -0.49
TUBGCP4-202ENST00000561691 LEMD3Q9Y2U8 911 aa12.01□□□□□ -0.49
TUBGCP4-202ENST00000561691 SLC4A4Q9Y6R1 1079 aa12.01□□□□□ -0.49
TUBGCP4-202ENST00000561691 RGPD3A6NKT7 1758 aaPredicted RBP12.01□□□□□ -0.49
TUBGCP4-202ENST00000561691 MAST2Q6P0Q8 1798 aa12.01□□□□□ -0.49
TUBGCP4-202ENST00000561691 RGPD4Q7Z3J3 1758 aa12.01□□□□□ -0.49
TUBGCP4-202ENST00000561691 APBA3O96018 575 aa12.01□□□□□ -0.49
TUBGCP4-202ENST00000561691 GNAT2P19087 354 aa12.01□□□□□ -0.49
TUBGCP4-202ENST00000561691 CCT2P78371 535 aaKnown RBP12.01□□□□□ -0.49
TUBGCP4-202ENST00000561691 CTDSPL2Q05D32 466 aa12.01□□□□□ -0.49
TUBGCP4-202ENST00000561691 ANP32BQ92688 251 aaKnown RBP12.01□□□□□ -0.49
TUBGCP4-202ENST00000561691 GPR101Q96P66 508 aaPredicted RBP12.01□□□□□ -0.49
TUBGCP4-202ENST00000561691 TMEM63CQ9P1W3 806 aa12.01□□□□□ -0.49
TUBGCP4-202ENST00000561691 RBM27Q9P2N5 1060 aaKnown RBP12.01□□□□□ -0.49
TUBGCP4-202ENST00000561691 ABCF2Q9UG63 623 aa12.01□□□□□ -0.49
TUBGCP4-202ENST00000561691 XDHP47989 1333 aa12.01□□□□□ -0.49
TUBGCP4-202ENST00000561691 PTPDC1A2A3K4 754 aa12□□□□□ -0.49
TUBGCP4-202ENST00000561691 B4E1Z4 1266 aa12□□□□□ -0.49
TUBGCP4-202ENST00000561691 APPP05067 770 aa12□□□□□ -0.49
TUBGCP4-202ENST00000561691 RXRBP28702 533 aa12□□□□□ -0.49
TUBGCP4-202ENST00000561691 PRDX5P30044 214 aa12□□□□□ -0.49
TUBGCP4-202ENST00000561691 ST5P78524 1137 aa12□□□□□ -0.49
TUBGCP4-202ENST00000561691 MECOMQ03112 1051 aa12□□□□□ -0.49
TUBGCP4-202ENST00000561691 DNM1Q05193 864 aaKnown RBP12□□□□□ -0.49
TUBGCP4-202ENST00000561691 RESTQ13127 1097 aa12□□□□□ -0.49
TUBGCP4-202ENST00000561691 GRIK5Q16478 980 aa12□□□□□ -0.49
TUBGCP4-202ENST00000561691 POTEAQ6S8J7 498 aa12□□□□□ -0.49
TUBGCP4-202ENST00000561691 STAG1Q8WVM7 1258 aa12□□□□□ -0.49
TUBGCP4-202ENST00000561691 CRAMP1Q96RY5 1269 aa12□□□□□ -0.49
TUBGCP4-202ENST00000561691 RAI14Q9P0K7 980 aa12□□□□□ -0.49
TUBGCP4-202ENST00000561691 ANAPC4Q9UJX5 808 aa12□□□□□ -0.49
TUBGCP4-202ENST00000561691 TCHHQ07283 1943 aa12□□□□□ -0.49
TUBGCP4-202ENST00000561691 MAGEB6P1A0A0J9YX57 407 aa11.99□□□□□ -0.49
TUBGCP4-202ENST00000561691 VPS37CA5D8V6 355 aaPredicted RBP11.99□□□□□ -0.49
TUBGCP4-202ENST00000561691 PDCP20941 246 aa11.99□□□□□ -0.49
TUBGCP4-202ENST00000561691 ZNF445P59923 1031 aa11.99□□□□□ -0.49
TUBGCP4-202ENST00000561691 FAM173BQ6P4H8 233 aa11.99□□□□□ -0.49
TUBGCP4-202ENST00000561691 VPS37DQ86XT2 251 aa11.99□□□□□ -0.49
TUBGCP4-202ENST00000561691 SDR42E1Q8WUS8 393 aa11.99□□□□□ -0.49
TUBGCP4-202ENST00000561691 ARID3AQ99856 593 aa11.99□□□□□ -0.49
TUBGCP4-202ENST00000561691 NAPBQ9H115 298 aa11.99□□□□□ -0.49
TUBGCP4-202ENST00000561691 LY9Q9HBG7 655 aa11.99□□□□□ -0.49
TUBGCP4-202ENST00000561691 ZKSCAN5Q9Y2L8 839 aa11.99□□□□□ -0.49
TUBGCP4-202ENST00000561691 KIAA1551Q9HCM1 1747 aa11.99□□□□□ -0.49
TUBGCP4-202ENST00000561691 DUOX1Q9NRD9 1551 aa11.99□□□□□ -0.49
TUBGCP4-202ENST00000561691 KLF18A0A0U1RQI7 1052 aa11.99□□□□□ -0.49
TUBGCP4-202ENST00000561691 EVX2Q03828 476 aa11.99□□□□□ -0.49
TUBGCP4-202ENST00000561691 AKNAD1Q5T1N1 836 aa11.99□□□□□ -0.49
TUBGCP4-202ENST00000561691 FERMT3Q86UX7 667 aa11.99□□□□□ -0.49
TUBGCP4-202ENST00000561691 DDX11Q96FC9 970 aa11.99□□□□□ -0.49
TUBGCP4-202ENST00000561691 RBM17Q96I25 401 aaKnown RBP11.99□□□□□ -0.49
TUBGCP4-202ENST00000561691 FAM217BQ9NTX9 383 aaPredicted RBP11.99□□□□□ -0.49
TUBGCP4-202ENST00000561691 ZSWIM5Q9P217 1185 aa11.99□□□□□ -0.49
TUBGCP4-202ENST00000561691 MYH13Q9UKX3 1938 aa11.99□□□□□ -0.49
TUBGCP4-202ENST00000561691 BBOX1O75936 387 aa11.98□□□□□ -0.49
TUBGCP4-202ENST00000561691 FGRP09769 529 aa11.98□□□□□ -0.49
TUBGCP4-202ENST00000561691 ADD1P35611 737 aaKnown RBP11.98□□□□□ -0.49
TUBGCP4-202ENST00000561691 ZSCAN23Q3MJ62 389 aa11.98□□□□□ -0.49
TUBGCP4-202ENST00000561691 NAA16Q6N069 864 aaPredicted RBP11.98□□□□□ -0.49
TUBGCP4-202ENST00000561691 CAVIN1Q6NZI2 390 aaKnown RBP11.98□□□□□ -0.49
TUBGCP4-202ENST00000561691 RALYLQ86SE5 291 aaKnown RBP11.98□□□□□ -0.49
TUBGCP4-202ENST00000561691 SGMS1Q86VZ5 419 aa11.98□□□□□ -0.49
TUBGCP4-202ENST00000561691 RPGRQ92834 1020 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms