RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 CERS3Q8IU89 383 aa15.2■□□□□ 0.02
CMTM4-203ENST00000561680 LCORLQ8N3X6 602 aa15.2■□□□□ 0.02
CMTM4-203ENST00000561680 ZDHHC15Q96MV8 337 aa15.2■□□□□ 0.02
CMTM4-203ENST00000561680 STRBPQ96SI9 672 aaKnown RBP15.2■□□□□ 0.02
CMTM4-203ENST00000561680 NOL10Q9BSC4 688 aaKnown RBP15.2■□□□□ 0.02
CMTM4-203ENST00000561680 AATFQ9NY61 560 aaKnown RBP eCLIP15.2■□□□□ 0.02
CMTM4-203ENST00000561680 HDAC9Q9UKV0 1011 aa15.2■□□□□ 0.02
CMTM4-203ENST00000561680 ZNF280AP59817 542 aaPredicted RBP15.19■□□□□ 0.02
CMTM4-203ENST00000561680 DYNLL1P63167 89 aaKnown RBP15.19■□□□□ 0.02
CMTM4-203ENST00000561680 OGFOD1Q8N543 542 aa15.19■□□□□ 0.02
CMTM4-203ENST00000561680 LSG1Q9H089 658 aaKnown RBP15.19■□□□□ 0.02
CMTM4-203ENST00000561680 ARMT1Q9H993 441 aa15.19■□□□□ 0.02
CMTM4-203ENST00000561680 FOXP2O15409 715 aa15.18■□□□□ 0.02
CMTM4-203ENST00000561680 EPB41L2O43491 1005 aaKnown RBP15.18■□□□□ 0.02
CMTM4-203ENST00000561680 BAG3O95817 575 aa15.18■□□□□ 0.02
CMTM4-203ENST00000561680 PLCG2P16885 1265 aa15.18■□□□□ 0.02
CMTM4-203ENST00000561680 GNAT2P19087 354 aa15.18■□□□□ 0.02
CMTM4-203ENST00000561680 CFAP100Q494V2 611 aa15.18■□□□□ 0.02
CMTM4-203ENST00000561680 APOBEC3HQ6NTF7 200 aaKnown RBP15.18■□□□□ 0.02
CMTM4-203ENST00000561680 MICALL2Q8IY33 904 aa15.18■□□□□ 0.02
CMTM4-203ENST00000561680 MTMR14Q8NCE2 650 aa15.18■□□□□ 0.02
CMTM4-203ENST00000561680 ANO2Q9NQ90 1003 aa15.18■□□□□ 0.02
CMTM4-203ENST00000561680 RPAP1Q9BWH6 1393 aaPredicted RBP15.18■□□□□ 0.02
CMTM4-203ENST00000561680 SHTN1A0MZ66 631 aa15.17■□□□□ 0.02
CMTM4-203ENST00000561680 DDNO94850 711 aaPredicted RBP15.17■□□□□ 0.02
CMTM4-203ENST00000561680 HSPD1P10809 573 aaKnown RBP15.17■□□□□ 0.02
CMTM4-203ENST00000561680 RHBDL3P58872 404 aa15.17■□□□□ 0.02
CMTM4-203ENST00000561680 PTH1RQ03431 593 aa15.17■□□□□ 0.02
CMTM4-203ENST00000561680 VPS53Q5VIR6 699 aa15.17■□□□□ 0.02
CMTM4-203ENST00000561680 KIAA1211Q6ZU35 1233 aa15.17■□□□□ 0.02
CMTM4-203ENST00000561680 SH3RF3Q8TEJ3 882 aaPredicted RBP15.17■□□□□ 0.02
CMTM4-203ENST00000561680 ZBED3Q96IU2 234 aaPredicted RBP15.17■□□□□ 0.02
CMTM4-203ENST00000561680 L3MBTL3Q96JM7 780 aaPredicted RBP15.17■□□□□ 0.02
CMTM4-203ENST00000561680 DSCC1Q9BVC3 393 aa15.17■□□□□ 0.02
CMTM4-203ENST00000561680 GPRC5DQ9NZD1 345 aa15.17■□□□□ 0.02
CMTM4-203ENST00000561680 PCDHAC2Q9Y5I4 1007 aa15.17■□□□□ 0.02
CMTM4-203ENST00000561680 ZMYM6O95789 1325 aa15.17■□□□□ 0.02
CMTM4-203ENST00000561680 ATAD5Q96QE3 1844 aa15.16■□□□□ 0.02
CMTM4-203ENST00000561680 GLTPD2A6NH11 291 aa15.16■□□□□ 0.02
CMTM4-203ENST00000561680 SPDYE2BA6NHP3 402 aa15.16■□□□□ 0.02
CMTM4-203ENST00000561680 SPDYE6P0CI01 402 aa15.16■□□□□ 0.02
CMTM4-203ENST00000561680 RBM5P52756 815 aaKnown RBP eCLIP15.16■□□□□ 0.02
CMTM4-203ENST00000561680 DPY19L2Q6NUT2 758 aa15.16■□□□□ 0.02
CMTM4-203ENST00000561680 USP26Q9BXU7 913 aa15.16■□□□□ 0.02
CMTM4-203ENST00000561680 CRNKL1Q9BZJ0 848 aaKnown RBP15.16■□□□□ 0.02
CMTM4-203ENST00000561680 MYOZ2Q9NPC6 264 aa15.16■□□□□ 0.02
CMTM4-203ENST00000561680 CNOT7Q9UIV1 285 aaKnown RBP15.16■□□□□ 0.02
CMTM4-203ENST00000561680 SLC4A4Q9Y6R1 1079 aa15.16■□□□□ 0.02
CMTM4-203ENST00000561680 GSG1L2A8MUP6 293 aa15.15■□□□□ 0.02
CMTM4-203ENST00000561680 PRKAB2O43741 272 aa15.15■□□□□ 0.02
CMTM4-203ENST00000561680 DLGAP5Q15398 846 aa15.15■□□□□ 0.02
CMTM4-203ENST00000561680 CDC42EP5Q6NZY7 148 aa15.15■□□□□ 0.02
CMTM4-203ENST00000561680 MAP4K1Q92918 833 aa15.15■□□□□ 0.02
CMTM4-203ENST00000561680 EPB41L4AQ9HCS5 686 aaPredicted RBP15.15■□□□□ 0.02
CMTM4-203ENST00000561680 PATL2C9JE40 543 aaKnown RBP15.14■□□□□ 0.01
CMTM4-203ENST00000561680 H7C1D1 291 aa15.14■□□□□ 0.01
CMTM4-203ENST00000561680 ALX1Q15699 326 aa15.14■□□□□ 0.01
CMTM4-203ENST00000561680 TEX11Q8IYF3 940 aa15.14■□□□□ 0.01
CMTM4-203ENST00000561680 SDR42E1Q8WUS8 393 aa15.14■□□□□ 0.01
CMTM4-203ENST00000561680 PRMT6Q96LA8 375 aaPredicted RBP15.14■□□□□ 0.01
CMTM4-203ENST00000561680 COL2A1P02458 1487 aaPredicted RBP15.14■□□□□ 0.01
CMTM4-203ENST00000561680 WNT10BO00744 389 aa15.13■□□□□ 0.01
CMTM4-203ENST00000561680 WDHD1O75717 1129 aaPredicted RBP15.13■□□□□ 0.01
CMTM4-203ENST00000561680 EGFRP00533 1210 aa15.13■□□□□ 0.01
CMTM4-203ENST00000561680 LMOD1P29536 600 aaPredicted RBP15.13■□□□□ 0.01
CMTM4-203ENST00000561680 EPS15P42566 896 aa15.13■□□□□ 0.01
CMTM4-203ENST00000561680 KIF4BQ2VIQ3 1234 aa15.13■□□□□ 0.01
CMTM4-203ENST00000561680 GIMAP6Q6P9H5 292 aa15.13■□□□□ 0.01
CMTM4-203ENST00000561680 DCP1AQ9NPI6 582 aaPredicted RBP15.13■□□□□ 0.01
CMTM4-203ENST00000561680 ATP8A2Q9NTI2 1148 aa15.13■□□□□ 0.01
CMTM4-203ENST00000561680 USP40Q9NVE5 1235 aa15.13■□□□□ 0.01
CMTM4-203ENST00000561680 MKRN1Q9UHC7 482 aaKnown RBP15.13■□□□□ 0.01
CMTM4-203ENST00000561680 RBM8AQ9Y5S9 174 aaKnown RBP15.13■□□□□ 0.01
CMTM4-203ENST00000561680 U3KPZ7 1027 aaPredicted RBP15.13■□□□□ 0.01
CMTM4-203ENST00000561680 FLT1P17948 1338 aa15.13■□□□□ 0.01
CMTM4-203ENST00000561680 APPP05067 770 aa15.12■□□□□ 0.01
CMTM4-203ENST00000561680 SPDYE2Q495Y8 402 aa15.12■□□□□ 0.01
CMTM4-203ENST00000561680 SAMD7Q7Z3H4 446 aa15.12■□□□□ 0.01
CMTM4-203ENST00000561680 IFNL3Q8IZI9 196 aa15.12■□□□□ 0.01
CMTM4-203ENST00000561680 TRPM4Q8TD43 1214 aa15.12■□□□□ 0.01
CMTM4-203ENST00000561680 TGFBRAP1Q8WUH2 860 aa15.12■□□□□ 0.01
CMTM4-203ENST00000561680 IDI2Q9BXS1 227 aa15.12■□□□□ 0.01
CMTM4-203ENST00000561680 NACAP1Q9BZK3 213 aa15.12■□□□□ 0.01
CMTM4-203ENST00000561680 TDRD3Q9H7E2 651 aaKnown RBP15.12■□□□□ 0.01
CMTM4-203ENST00000561680 UPF2Q9HAU5 1272 aaKnown RBP15.12■□□□□ 0.01
CMTM4-203ENST00000561680 GREB1LQ9C091 1923 aaPredicted RBP15.11■□□□□ 0.01
CMTM4-203ENST00000561680 NPM3O75607 178 aaKnown RBP15.11■□□□□ 0.01
CMTM4-203ENST00000561680 FGAP02671 866 aa15.11■□□□□ 0.01
CMTM4-203ENST00000561680 HSPA4P34932 840 aa15.11■□□□□ 0.01
CMTM4-203ENST00000561680 USP5P45974 858 aa15.11■□□□□ 0.01
CMTM4-203ENST00000561680 NECTIN1Q15223 517 aa15.11■□□□□ 0.01
CMTM4-203ENST00000561680 NBPF9Q3BBW0 867 aa15.11■□□□□ 0.01
CMTM4-203ENST00000561680 TBC1D10BQ4KMP7 808 aaPredicted RBP15.11■□□□□ 0.01
CMTM4-203ENST00000561680 NAPBQ9H115 298 aa15.11■□□□□ 0.01
CMTM4-203ENST00000561680 DDX4Q9NQI0 724 aaKnown RBP15.11■□□□□ 0.01
CMTM4-203ENST00000561680 ADARB2Q9NS39 739 aaKnown RBP15.11■□□□□ 0.01
CMTM4-203ENST00000561680 TMOD2Q9NZR1 351 aa15.11■□□□□ 0.01
CMTM4-203ENST00000561680 ZNF70Q9UC06 446 aaPredicted RBP15.11■□□□□ 0.01
CMTM4-203ENST00000561680 TRPM7Q96QT4 1865 aa15.11■□□□□ 0.01
CMTM4-203ENST00000561680 MYH4Q9Y623 1939 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms