RNA–Protein interactions for RNA: ENST00000560734.5

SHF-208, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3 BASIC

Gene SHF, Length 1,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-208ENST00000560734 NSFL1CQ9UNZ2 370 aaKnown RBP29.45■■■□□ 2.3
SHF-208ENST00000560734 HPS5Q9UPZ3 1129 aa29.45■■■□□ 2.3
SHF-208ENST00000560734 MAST2Q6P0Q8 1798 aa29.44■■■□□ 2.3
SHF-208ENST00000560734 TDO2P48775 406 aa29.44■■■□□ 2.3
SHF-208ENST00000560734 CCT2P78371 535 aaKnown RBP29.44■■■□□ 2.3
SHF-208ENST00000560734 ATL3Q6DD88 541 aa29.44■■■□□ 2.3
SHF-208ENST00000560734 RBM17Q96I25 401 aaKnown RBP29.44■■■□□ 2.3
SHF-208ENST00000560734 MYH13Q9UKX3 1938 aa29.44■■■□□ 2.3
SHF-208ENST00000560734 GADD45BO75293 160 aaPredicted RBP29.43■■■□□ 2.3
SHF-208ENST00000560734 PCP11498 1178 aaKnown RBP29.43■■■□□ 2.3
SHF-208ENST00000560734 RESTQ13127 1097 aa29.43■■■□□ 2.3
SHF-208ENST00000560734 MFSD6Q6ZSS7 791 aa29.43■■■□□ 2.3
SHF-208ENST00000560734 PROM2Q8N271 834 aa29.43■■■□□ 2.3
SHF-208ENST00000560734 BBOX1O75936 387 aa29.42■■■□□ 2.3
SHF-208ENST00000560734 LETM1O95202 739 aaPredicted RBP29.42■■■□□ 2.3
SHF-208ENST00000560734 CYB5R4Q7L1T6 521 aa29.42■■■□□ 2.3
SHF-208ENST00000560734 TMC4Q7Z404 712 aa29.42■■■□□ 2.3
SHF-208ENST00000560734 GOLGA8BA8MQT2 603 aa29.42■■■□□ 2.3
SHF-208ENST00000560734 ADGRA1Q86SQ6 560 aa29.42■■■□□ 2.3
SHF-208ENST00000560734 IGDCC4Q8TDY8 1250 aa29.42■■■□□ 2.3
SHF-208ENST00000560734 NSUN4Q96CB9 384 aaKnown RBP29.42■■■□□ 2.3
SHF-208ENST00000560734 DDX11Q96FC9 970 aa29.42■■■□□ 2.3
SHF-208ENST00000560734 CHD4Q14839 1912 aa29.42■■■□□ 2.3
SHF-208ENST00000560734 FIBPO43427 364 aa29.41■■■□□ 2.3
SHF-208ENST00000560734 PRKAB2O43741 272 aa29.41■■■□□ 2.3
SHF-208ENST00000560734 KLRK1P26718 216 aa29.41■■■□□ 2.3
SHF-208ENST00000560734 LRSAM1Q6UWE0 723 aa29.41■■■□□ 2.3
SHF-208ENST00000560734 CRAMP1Q96RY5 1269 aa29.41■■■□□ 2.3
SHF-208ENST00000560734 GPHNQ9NQX3 736 aaPredicted RBP29.41■■■□□ 2.3
SHF-208ENST00000560734 NEDD4P46934 1319 aa29.41■■■□□ 2.3
SHF-208ENST00000560734 B4E1Z4 1266 aa29.4■■■□□ 2.3
SHF-208ENST00000560734 NID2Q14112 1375 aa29.4■■■□□ 2.3
SHF-208ENST00000560734 MIGA1Q8NAN2 632 aa29.4■■■□□ 2.3
SHF-208ENST00000560734 FLAD1Q8NFF5 587 aa29.4■■■□□ 2.3
SHF-208ENST00000560734 NCOA5Q9HCD5 579 aaKnown RBP29.4■■■□□ 2.3
SHF-208ENST00000560734 KIAA1551Q9HCM1 1747 aa29.4■■■□□ 2.3
SHF-208ENST00000560734 ANKIB1Q9P2G1 1089 aa29.4■■■□□ 2.3
SHF-208ENST00000560734 RBM27Q9P2N5 1060 aaKnown RBP29.4■■■□□ 2.3
SHF-208ENST00000560734 NAP1L2Q9ULW6 460 aaPredicted RBP29.4■■■□□ 2.3
SHF-208ENST00000560734 POLRMTO00411 1230 aaKnown RBP29.4■■■□□ 2.3
SHF-208ENST00000560734 WDR66Q8TBY9 1149 aa29.4■■■□□ 2.3
SHF-208ENST00000560734 UPF1Q92900 1129 aaKnown RBP eCLIP29.4■■■□□ 2.36e-7■■■■■ 28.1
SHF-208ENST00000560734 DUOX1Q9NRD9 1551 aa29.39■■■□□ 2.3
SHF-208ENST00000560734 CDKL5O76039 1030 aa29.39■■■□□ 2.3
SHF-208ENST00000560734 RCAN1P53805 252 aa29.39■■■□□ 2.3
SHF-208ENST00000560734 FERMT3Q86UX7 667 aa29.39■■■□□ 2.3
SHF-208ENST00000560734 TMTC2Q8N394 836 aa29.39■■■□□ 2.3
SHF-208ENST00000560734 TFCP2L1Q9NZI6 479 aa29.39■■■□□ 2.3
SHF-208ENST00000560734 CFAP45Q9UL16 551 aa29.39■■■□□ 2.3
SHF-208ENST00000560734 ATP2B4P23634 1241 aa29.38■■■□□ 2.29
SHF-208ENST00000560734 PPARAQ07869 468 aa29.38■■■□□ 2.29
SHF-208ENST00000560734 CCDC183Q5T5S1 534 aa29.38■■■□□ 2.29
SHF-208ENST00000560734 TDRD7Q8NHU6 1098 aaKnown RBP29.38■■■□□ 2.29
SHF-208ENST00000560734 DTNBO60941 627 aa29.37■■■□□ 2.29
SHF-208ENST00000560734 FDPSP14324 419 aaKnown RBP29.37■■■□□ 2.29
SHF-208ENST00000560734 NT5C2P49902 561 aa29.37■■■□□ 2.29
SHF-208ENST00000560734 MECOMQ03112 1051 aa29.37■■■□□ 2.29
SHF-208ENST00000560734 SART3Q15020 963 aaKnown RBP29.37■■■□□ 2.29
SHF-208ENST00000560734 ZNF804AQ7Z570 1209 aa29.37■■■□□ 2.29
SHF-208ENST00000560734 NLGN1Q8N2Q7 840 aa29.37■■■□□ 2.29
SHF-208ENST00000560734 ZNF384Q8TF68 577 aa29.37■■■□□ 2.29
SHF-208ENST00000560734 LY9Q9HBG7 655 aa29.37■■■□□ 2.29
SHF-208ENST00000560734 PODXL2Q9NZ53 605 aa29.37■■■□□ 2.29
SHF-208ENST00000560734 ZSWIM5Q9P217 1185 aa29.37■■■□□ 2.29
SHF-208ENST00000560734 CPLX1O14810 134 aa29.37■■■□□ 2.29
SHF-208ENST00000560734 CTDSPL2Q05D32 466 aa29.37■■■□□ 2.29
SHF-208ENST00000560734 DDR1Q08345 913 aa29.37■■■□□ 2.29
SHF-208ENST00000560734 CPLX2Q6PUV4 134 aaKnown RBP29.37■■■□□ 2.29
SHF-208ENST00000560734 APOA5Q6Q788 366 aa29.37■■■□□ 2.29
SHF-208ENST00000560734 AKT1S1Q96B36 256 aa29.37■■■□□ 2.29
SHF-208ENST00000560734 EP400Q96L91 3159 aa29.36■■■□□ 2.29
SHF-208ENST00000560734 TMEM67Q5HYA8 995 aa29.36■■■□□ 2.29
SHF-208ENST00000560734 FGRP09769 529 aa29.35■■■□□ 2.29
SHF-208ENST00000560734 TTC6Q86TZ1 520 aa29.35■■■□□ 2.29
SHF-208ENST00000560734 ATP8A2Q9NTI2 1148 aa29.35■■■□□ 2.29
SHF-208ENST00000560734 CCDC88AQ3V6T2 1871 aa29.35■■■□□ 2.29
SHF-208ENST00000560734 KDM4AO75164 1064 aa29.34■■■□□ 2.29
SHF-208ENST00000560734 METAP2P50579 478 aaKnown RBP eCLIP29.34■■■□□ 2.29
SHF-208ENST00000560734 TXNRD3Q86VQ6 643 aa29.34■■■□□ 2.29
SHF-208ENST00000560734 NRXN2Q9P2S2 1712 aa29.34■■■□□ 2.29
SHF-208ENST00000560734 CRNKL1Q9BZJ0 848 aaKnown RBP29.34■■■□□ 2.29
SHF-208ENST00000560734 IFIT3O14879 490 aaKnown RBP29.33■■■□□ 2.29
SHF-208ENST00000560734 ZBTB43O43298 467 aa29.33■■■□□ 2.29
SHF-208ENST00000560734 CERS3Q8IU89 383 aa29.33■■■□□ 2.29
SHF-208ENST00000560734 LEO1Q8WVC0 666 aaPredicted RBP29.33■■■□□ 2.29
SHF-208ENST00000560734 SPATA32Q96LK8 384 aa29.33■■■□□ 2.29
SHF-208ENST00000560734 PANK2Q9BZ23 570 aa29.33■■■□□ 2.29
SHF-208ENST00000560734 TACC3Q9Y6A5 838 aa29.33■■■□□ 2.29
SHF-208ENST00000560734 RGPD3A6NKT7 1758 aaPredicted RBP29.32■■■□□ 2.28
SHF-208ENST00000560734 RGPD4Q7Z3J3 1758 aa29.32■■■□□ 2.28
SHF-208ENST00000560734 SYCE3A1L190 88 aa29.32■■■□□ 2.28
SHF-208ENST00000560734 ESR2Q92731 530 aa29.32■■■□□ 2.28
SHF-208ENST00000560734 ORC3Q9UBD5 711 aaPredicted RBP29.32■■■□□ 2.28
SHF-208ENST00000560734 LRRC37AA6NMS7 1700 aa29.32■■■□□ 2.28
SHF-208ENST00000560734 GSTO1P78417 241 aa29.31■■■□□ 2.28
SHF-208ENST00000560734 SDR42E1Q8WUS8 393 aa29.31■■■□□ 2.28
SHF-208ENST00000560734 ZNF396Q96N95 335 aaPredicted RBP29.31■■■□□ 2.28
SHF-208ENST00000560734 ERICH2A1L162 156 aa29.31■■■□□ 2.28
SHF-208ENST00000560734 GPSM2P81274 684 aa29.31■■■□□ 2.28
SHF-208ENST00000560734 SYNE3Q6ZMZ3 975 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms