RNA–Protein interactions for RNA: ENST00000560390.1

TM2D3-211, Transcript of TM2 domain containing 3, humanhuman

Gene TM2D3, Length 3,102 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-211ENST00000560390 USP17L1Q7RTZ2 530 aa6.74□□□□□ -1.33
TM2D3-211ENST00000560390 DZIP1Q86YF9 867 aaKnown RBP6.74□□□□□ -1.33
TM2D3-211ENST00000560390 KIAA0825Q8IV33 1275 aa6.74□□□□□ -1.33
TM2D3-211ENST00000560390 C17orf53Q8N3J3 647 aaPredicted RBP6.74□□□□□ -1.33
TM2D3-211ENST00000560390 KBTBD3Q8NAB2 608 aa6.74□□□□□ -1.33
TM2D3-211ENST00000560390 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.74□□□□□ -1.33
TM2D3-211ENST00000560390 PIH1D3Q9NQM4 214 aaKnown RBP6.74□□□□□ -1.33
TM2D3-211ENST00000560390 DIAPH3Q9NSV4 1193 aa6.74□□□□□ -1.33
TM2D3-211ENST00000560390 GJA3Q9Y6H8 435 aa6.74□□□□□ -1.33
TM2D3-211ENST00000560390 PRELPP51888 382 aa6.74□□□□□ -1.33
TM2D3-211ENST00000560390 EIF6P56537 245 aaKnown RBP6.74□□□□□ -1.33
TM2D3-211ENST00000560390 SLFNL1Q499Z3 407 aa6.74□□□□□ -1.33
TM2D3-211ENST00000560390 C9orf131Q5VYM1 1079 aa6.74□□□□□ -1.33
TM2D3-211ENST00000560390 CWC27Q6UX04 472 aaKnown RBP6.74□□□□□ -1.33
TM2D3-211ENST00000560390 TBC1D22AQ8WUA7 517 aa6.74□□□□□ -1.33
TM2D3-211ENST00000560390 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.74□□□□□ -1.33
TM2D3-211ENST00000560390 VPS33BQ9H267 617 aa6.74□□□□□ -1.33
TM2D3-211ENST00000560390 ZBTB12Q9Y330 459 aaPredicted RBP6.74□□□□□ -1.33
TM2D3-211ENST00000560390 LTBP3Q9NS15 1303 aa6.74□□□□□ -1.33
TM2D3-211ENST00000560390 UQCRHLA0A096LP55 91 aa6.74□□□□□ -1.33
TM2D3-211ENST00000560390 A0A0U1RQG5 324 aaPredicted RBP6.74□□□□□ -1.33
TM2D3-211ENST00000560390 UQCRHP07919 91 aa6.74□□□□□ -1.33
TM2D3-211ENST00000560390 CXCL9Q07325 125 aa6.74□□□□□ -1.33
TM2D3-211ENST00000560390 LRRFIP1Q32MZ4 808 aaKnown RBP6.74□□□□□ -1.33
TM2D3-211ENST00000560390 STRIP1Q5VSL9 837 aa6.74□□□□□ -1.33
TM2D3-211ENST00000560390 LRRC37AA6NMS7 1700 aa6.73□□□□□ -1.33
TM2D3-211ENST00000560390 KIAA1551Q9HCM1 1747 aa6.73□□□□□ -1.33
TM2D3-211ENST00000560390 PSMD14O00487 310 aa6.73□□□□□ -1.33
TM2D3-211ENST00000560390 CPA1P15085 419 aa6.73□□□□□ -1.33
TM2D3-211ENST00000560390 RBM5P52756 815 aaKnown RBP eCLIP6.73□□□□□ -1.33
TM2D3-211ENST00000560390 SPTY2D1Q68D10 685 aaPredicted RBP6.73□□□□□ -1.33
TM2D3-211ENST00000560390 CIAPIN1Q6FI81 312 aa6.73□□□□□ -1.33
TM2D3-211ENST00000560390 MAGEB6Q8N7X4 407 aa6.73□□□□□ -1.33
TM2D3-211ENST00000560390 ESYT1Q9BSJ8 1104 aa6.73□□□□□ -1.33
TM2D3-211ENST00000560390 PDCL3Q9H2J4 239 aa6.73□□□□□ -1.33
TM2D3-211ENST00000560390 TTF2Q9UNY4 1162 aaKnown RBP6.73□□□□□ -1.33
TM2D3-211ENST00000560390 ZKSCAN5Q9Y2L8 839 aa6.73□□□□□ -1.33
TM2D3-211ENST00000560390 DLEC1Q9Y238 1755 aa6.73□□□□□ -1.33
TM2D3-211ENST00000560390 TCHHQ07283 1943 aa6.73□□□□□ -1.33
TM2D3-211ENST00000560390 COL1A1P02452 1464 aaPredicted RBP6.73□□□□□ -1.33
TM2D3-211ENST00000560390 SCNN1DP51172 638 aa6.73□□□□□ -1.33
TM2D3-211ENST00000560390 DIXDC1Q155Q3 683 aa6.73□□□□□ -1.33
TM2D3-211ENST00000560390 GRIK5Q16478 980 aa6.73□□□□□ -1.33
TM2D3-211ENST00000560390 NAA16Q6N069 864 aaPredicted RBP6.73□□□□□ -1.33
TM2D3-211ENST00000560390 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.73□□□□□ -1.33
TM2D3-211ENST00000560390 OGFOD1Q8N543 542 aa6.73□□□□□ -1.33
TM2D3-211ENST00000560390 CERS5Q8N5B7 392 aa6.73□□□□□ -1.33
TM2D3-211ENST00000560390 BRD1O95696 1058 aa6.72□□□□□ -1.33
TM2D3-211ENST00000560390 PTMAP06454 111 aaKnown RBP6.72□□□□□ -1.33
TM2D3-211ENST00000560390 CYP7A1P22680 504 aa6.72□□□□□ -1.33
TM2D3-211ENST00000560390 CHMLP26374 656 aa6.72□□□□□ -1.33
TM2D3-211ENST00000560390 MECOMQ03112 1051 aa6.72□□□□□ -1.33
TM2D3-211ENST00000560390 DACT2Q5SW24 774 aa6.72□□□□□ -1.33
TM2D3-211ENST00000560390 ZSCAN25Q6NSZ9 544 aa6.72□□□□□ -1.33
TM2D3-211ENST00000560390 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.72□□□□□ -1.33
TM2D3-211ENST00000560390 USP48Q86UV5 1035 aa6.72□□□□□ -1.33
TM2D3-211ENST00000560390 MIGA1Q8NAN2 632 aa6.72□□□□□ -1.33
TM2D3-211ENST00000560390 FAM227BQ96M60 508 aa6.72□□□□□ -1.33
TM2D3-211ENST00000560390 FAM205AQ6ZU69 1335 aa6.72□□□□□ -1.33
TM2D3-211ENST00000560390 ZNF532Q9HCE3 1301 aa6.72□□□□□ -1.33
TM2D3-211ENST00000560390 PDE6AP16499 860 aa6.72□□□□□ -1.33
TM2D3-211ENST00000560390 TNIP1Q15025 636 aa6.72□□□□□ -1.33
TM2D3-211ENST00000560390 SEC62Q99442 399 aaKnown RBP6.72□□□□□ -1.33
TM2D3-211ENST00000560390 FZD9O00144 591 aa6.72□□□□□ -1.33
TM2D3-211ENST00000560390 RNF113AO15541 343 aaKnown RBP6.72□□□□□ -1.33
TM2D3-211ENST00000560390 ZNF500O60304 480 aaPredicted RBP6.72□□□□□ -1.33
TM2D3-211ENST00000560390 ZFYP08048 801 aaPredicted RBP6.72□□□□□ -1.33
TM2D3-211ENST00000560390 NMIQ13287 307 aaPredicted RBP6.72□□□□□ -1.33
TM2D3-211ENST00000560390 DPY19L2Q6NUT2 758 aa6.72□□□□□ -1.33
TM2D3-211ENST00000560390 RSBN1LQ6PCB5 846 aaPredicted RBP6.72□□□□□ -1.33
TM2D3-211ENST00000560390 NSUN4Q96CB9 384 aaKnown RBP6.72□□□□□ -1.33
TM2D3-211ENST00000560390 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.72□□□□□ -1.33
TM2D3-211ENST00000560390 BRCA1P38398 1863 aaKnown RBP6.71□□□□□ -1.33
TM2D3-211ENST00000560390 PDS5AQ29RF7 1337 aaKnown RBP6.71□□□□□ -1.33
TM2D3-211ENST00000560390 A0A0D9SFI3 127 aa6.71□□□□□ -1.34
TM2D3-211ENST00000560390 HIP1O00291 1037 aa6.71□□□□□ -1.34
TM2D3-211ENST00000560390 ADD2P35612 726 aa6.71□□□□□ -1.34
TM2D3-211ENST00000560390 RBM26Q5T8P6 1007 aaKnown RBP6.71□□□□□ -1.34
TM2D3-211ENST00000560390 RUFY2Q8WXA3 655 aa6.71□□□□□ -1.34
TM2D3-211ENST00000560390 AIDAQ96BJ3 306 aa6.71□□□□□ -1.34
TM2D3-211ENST00000560390 TTC12Q9H892 705 aaPredicted RBP6.71□□□□□ -1.34
TM2D3-211ENST00000560390 USP25Q9UHP3 1055 aa6.71□□□□□ -1.34
TM2D3-211ENST00000560390 CNPY2Q9Y2B0 182 aa6.71□□□□□ -1.34
TM2D3-211ENST00000560390 LTBP1Q14766 1721 aa6.71□□□□□ -1.34
TM2D3-211ENST00000560390 ZNF541Q9H0D2 1346 aa6.71□□□□□ -1.34
TM2D3-211ENST00000560390 DDNO94850 711 aaPredicted RBP6.71□□□□□ -1.34
TM2D3-211ENST00000560390 VIL1P09327 827 aaKnown RBP6.71□□□□□ -1.34
TM2D3-211ENST00000560390 CCDC129Q6ZRS4 1044 aa6.71□□□□□ -1.34
TM2D3-211ENST00000560390 OSBP2Q969R2 916 aa6.71□□□□□ -1.34
TM2D3-211ENST00000560390 NOL10Q9BSC4 688 aaKnown RBP6.71□□□□□ -1.34
TM2D3-211ENST00000560390 PUS7LQ9H0K6 701 aaKnown RBP6.71□□□□□ -1.34
TM2D3-211ENST00000560390 AATFQ9NY61 560 aaKnown RBP eCLIP6.71□□□□□ -1.34
TM2D3-211ENST00000560390 SALL1Q9NSC2 1324 aa6.71□□□□□ -1.34
TM2D3-211ENST00000560390 COL4A5P29400 1685 aa6.71□□□□□ -1.34
TM2D3-211ENST00000560390 APPP05067 770 aa6.7□□□□□ -1.34
TM2D3-211ENST00000560390 USP17L8P0C7I0 530 aa6.7□□□□□ -1.34
TM2D3-211ENST00000560390 GSTO1P78417 241 aa6.7□□□□□ -1.34
TM2D3-211ENST00000560390 CUL4AQ13619 759 aa6.7□□□□□ -1.34
TM2D3-211ENST00000560390 DNTTIP2Q5QJE6 756 aaKnown RBP6.7□□□□□ -1.34
TM2D3-211ENST00000560390 ADGRA1Q86SQ6 560 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms