RNA–Protein interactions for RNA: ENST00000560350.5

USP3-AS1-206, USP3 antisense RNA 1, humanhuman

TSL 2

Gene USP3-AS1, Length 407 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-206ENST00000560350 ATP10DQ9P241 1426 aa9.68□□□□□ -0.86
USP3-AS1-206ENST00000560350 ELL2O00472 640 aaPredicted RBP9.68□□□□□ -0.86
USP3-AS1-206ENST00000560350 ITGA6P23229 1130 aa9.68□□□□□ -0.86
USP3-AS1-206ENST00000560350 PROSER3Q2NL68 480 aa9.68□□□□□ -0.86
USP3-AS1-206ENST00000560350 TWISTNBQ3B726 338 aaPredicted RBP9.68□□□□□ -0.86
USP3-AS1-206ENST00000560350 SUSD4Q5VX71 490 aa9.68□□□□□ -0.86
USP3-AS1-206ENST00000560350 LOC100996750A0A140TA64 210 aa9.67□□□□□ -0.86
USP3-AS1-206ENST00000560350 ANXA1P04083 346 aa9.67□□□□□ -0.86
USP3-AS1-206ENST00000560350 GPTP24298 496 aa9.67□□□□□ -0.86
USP3-AS1-206ENST00000560350 RBM17Q96I25 401 aaKnown RBP9.67□□□□□ -0.86
USP3-AS1-206ENST00000560350 CNTNAP3BQ96NU0 1288 aa9.67□□□□□ -0.86
USP3-AS1-206ENST00000560350 COL25A1Q9BXS0 654 aaPredicted RBP9.67□□□□□ -0.86
USP3-AS1-206ENST00000560350 KRTAP4-6Q9BYQ5 205 aa9.67□□□□□ -0.86
USP3-AS1-206ENST00000560350 CNTNAP3Q9BZ76 1288 aa9.67□□□□□ -0.86
USP3-AS1-206ENST00000560350 TMX4Q9H1E5 349 aaPredicted RBP9.67□□□□□ -0.86
USP3-AS1-206ENST00000560350 CYLDQ9NQC7 956 aa9.67□□□□□ -0.86
USP3-AS1-206ENST00000560350 PCDHB9Q9Y5E1 797 aa9.67□□□□□ -0.86
USP3-AS1-206ENST00000560350 SIPA1L3O60292 1781 aaPredicted RBP9.66□□□□□ -0.86
USP3-AS1-206ENST00000560350 SH3TC1Q8TE82 1336 aa9.66□□□□□ -0.86
USP3-AS1-206ENST00000560350 C4AP0C0L4 1744 aa9.66□□□□□ -0.86
USP3-AS1-206ENST00000560350 FAM177BA6PVY3 158 aa9.66□□□□□ -0.86
USP3-AS1-206ENST00000560350 GPR37L1O60883 481 aa9.66□□□□□ -0.86
USP3-AS1-206ENST00000560350 HOXA10P31260 410 aaPredicted RBP9.66□□□□□ -0.86
USP3-AS1-206ENST00000560350 CRY2Q49AN0 593 aa9.66□□□□□ -0.86
USP3-AS1-206ENST00000560350 RNFT1Q5M7Z0 435 aa9.66□□□□□ -0.86
USP3-AS1-206ENST00000560350 DIEXFQ68CQ4 756 aaKnown RBP9.66□□□□□ -0.86
USP3-AS1-206ENST00000560350 NLRP10Q86W26 655 aa9.66□□□□□ -0.86
USP3-AS1-206ENST00000560350 RTKN2Q8IZC4 609 aa9.66□□□□□ -0.86
USP3-AS1-206ENST00000560350 RPGRQ92834 1020 aaKnown RBP9.66□□□□□ -0.86
USP3-AS1-206ENST00000560350 ZNF428Q96B54 188 aa9.66□□□□□ -0.86
USP3-AS1-206ENST00000560350 CRAMP1Q96RY5 1269 aa9.66□□□□□ -0.86
USP3-AS1-206ENST00000560350 ISCA1Q9BUE6 129 aa9.66□□□□□ -0.86
USP3-AS1-206ENST00000560350 TRMT112Q9UI30 125 aaKnown RBP9.66□□□□□ -0.86
USP3-AS1-206ENST00000560350 WWC3Q9ULE0 1092 aa9.66□□□□□ -0.86
USP3-AS1-206ENST00000560350 TUBGCP6Q96RT7 1819 aa9.66□□□□□ -0.86
USP3-AS1-206ENST00000560350 E9PSI1 815 aa9.65□□□□□ -0.86
USP3-AS1-206ENST00000560350 VAMP4O75379 141 aa9.65□□□□□ -0.86
USP3-AS1-206ENST00000560350 BBOX1O75936 387 aa9.65□□□□□ -0.86
USP3-AS1-206ENST00000560350 NTSR2O95665 410 aa9.65□□□□□ -0.86
USP3-AS1-206ENST00000560350 LMNB1P20700 586 aa9.65□□□□□ -0.86
USP3-AS1-206ENST00000560350 NEXNQ0ZGT2 675 aa9.65□□□□□ -0.86
USP3-AS1-206ENST00000560350 KSR2Q6VAB6 950 aa9.65□□□□□ -0.86
USP3-AS1-206ENST00000560350 TSPYL6Q8N831 410 aa9.65□□□□□ -0.86
USP3-AS1-206ENST00000560350 CCDC191Q8NCU4 936 aa9.65□□□□□ -0.86
USP3-AS1-206ENST00000560350 TSR2Q969E8 191 aaKnown RBP9.65□□□□□ -0.86
USP3-AS1-206ENST00000560350 UBN2Q6ZU65 1347 aa9.64□□□□□ -0.87
USP3-AS1-206ENST00000560350 LTBP3Q9NS15 1303 aa9.64□□□□□ -0.87
USP3-AS1-206ENST00000560350 C21orf2O43822 256 aa9.64□□□□□ -0.87
USP3-AS1-206ENST00000560350 CCDC93Q567U6 631 aa9.64□□□□□ -0.87
USP3-AS1-206ENST00000560350 C9orf131Q5VYM1 1079 aa9.64□□□□□ -0.87
USP3-AS1-206ENST00000560350 PRPF40BQ6NWY9 871 aaKnown RBP9.64□□□□□ -0.87
USP3-AS1-206ENST00000560350 TMC4Q7Z404 712 aa9.64□□□□□ -0.87
USP3-AS1-206ENST00000560350 VWA5B2Q8N398 1253 aa9.64□□□□□ -0.87
USP3-AS1-206ENST00000560350 BANK1Q8NDB2 785 aa9.64□□□□□ -0.87
USP3-AS1-206ENST00000560350 C7orf43Q8WVR3 580 aa9.64□□□□□ -0.87
USP3-AS1-206ENST00000560350 METTL22Q9BUU2 404 aaPredicted RBP9.64□□□□□ -0.87
USP3-AS1-206ENST00000560350 VPS33BQ9H267 617 aa9.64□□□□□ -0.87
USP3-AS1-206ENST00000560350 PHAXQ9H814 394 aaKnown RBP9.64□□□□□ -0.87
USP3-AS1-206ENST00000560350 RIC1Q4ADV7 1423 aa9.64□□□□□ -0.87
USP3-AS1-206ENST00000560350 FANCIQ9NVI1 1328 aa9.63□□□□□ -0.87
USP3-AS1-206ENST00000560350 CT47B1P0C2W7 299 aaPredicted RBP9.63□□□□□ -0.87
USP3-AS1-206ENST00000560350 RNF144AP50876 292 aaPredicted RBP9.63□□□□□ -0.87
USP3-AS1-206ENST00000560350 EXOSC9Q06265 439 aaKnown RBP9.63□□□□□ -0.87
USP3-AS1-206ENST00000560350 SF3B3Q15393 1217 aaKnown RBP9.63□□□□□ -0.87
USP3-AS1-206ENST00000560350 DDX46Q7L014 1031 aaKnown RBP9.63□□□□□ -0.87
USP3-AS1-206ENST00000560350 ZBTB38Q8NAP3 1195 aaPredicted RBP9.63□□□□□ -0.87
USP3-AS1-206ENST00000560350 MTMR14Q8NCE2 650 aa9.63□□□□□ -0.87
USP3-AS1-206ENST00000560350 ZNF521Q96K83 1311 aa9.62□□□□□ -0.87
USP3-AS1-206ENST00000560350 ERVK-9P63128 1117 aa9.62□□□□□ -0.87
USP3-AS1-206ENST00000560350 NR1H3Q13133 447 aa9.62□□□□□ -0.87
USP3-AS1-206ENST00000560350 SV2AQ7L0J3 742 aa9.62□□□□□ -0.87
USP3-AS1-206ENST00000560350 LYSMD3Q7Z3D4 306 aa9.62□□□□□ -0.87
USP3-AS1-206ENST00000560350 TAOK3Q9H2K8 898 aa9.62□□□□□ -0.87
USP3-AS1-206ENST00000560350 CWC25Q9NXE8 425 aaPredicted RBP9.62□□□□□ -0.87
USP3-AS1-206ENST00000560350 RNF181Q9P0P0 153 aa9.62□□□□□ -0.87
USP3-AS1-206ENST00000560350 KDM2BQ8NHM5 1336 aa9.61□□□□□ -0.87
USP3-AS1-206ENST00000560350 CDC14CA4D256 554 aa9.61□□□□□ -0.87
USP3-AS1-206ENST00000560350 PI4KAP2A4QPH2 592 aa9.61□□□□□ -0.87
USP3-AS1-206ENST00000560350 ATP5J2-PTCD1G3V325 749 aa9.61□□□□□ -0.87
USP3-AS1-206ENST00000560350 IRS4O14654 1257 aaPredicted RBP9.61□□□□□ -0.87
USP3-AS1-206ENST00000560350 PCCAP05165 728 aaPredicted RBP9.61□□□□□ -0.87
USP3-AS1-206ENST00000560350 FLIIQ13045 1269 aa9.61□□□□□ -0.87
USP3-AS1-206ENST00000560350 SP8Q8IXZ3 490 aa9.61□□□□□ -0.87
USP3-AS1-206ENST00000560350 PI4KAP1Q8N8J0 262 aa9.61□□□□□ -0.87
USP3-AS1-206ENST00000560350 SUPT20HQ8NEM7 779 aa9.61□□□□□ -0.87
USP3-AS1-206ENST00000560350 PSMD1Q99460 953 aa9.61□□□□□ -0.87
USP3-AS1-206ENST00000560350 MYD88Q99836 296 aa9.61□□□□□ -0.87
USP3-AS1-206ENST00000560350 MAP3K2Q9Y2U5 619 aa9.61□□□□□ -0.87
USP3-AS1-206ENST00000560350 KDM3BQ7LBC6 1761 aa9.6□□□□□ -0.87
USP3-AS1-206ENST00000560350 NFKBIEO00221 500 aa9.6□□□□□ -0.87
USP3-AS1-206ENST00000560350 PDE8AO60658 829 aa9.6□□□□□ -0.87
USP3-AS1-206ENST00000560350 HCLS1P14317 486 aaPredicted RBP9.6□□□□□ -0.87
USP3-AS1-206ENST00000560350 MCCD1P59942 119 aaPredicted RBP9.6□□□□□ -0.87
USP3-AS1-206ENST00000560350 FKBP4Q02790 459 aaKnown RBP eCLIP9.6□□□□□ -0.87
USP3-AS1-206ENST00000560350 SLFN5Q08AF3 891 aa9.6□□□□□ -0.87
USP3-AS1-206ENST00000560350 FKBP5Q13451 457 aaPredicted RBP9.6□□□□□ -0.87
USP3-AS1-206ENST00000560350 DNAAF4Q8WXU2 420 aa9.6□□□□□ -0.87
USP3-AS1-206ENST00000560350 FAM89AQ96GI7 184 aa9.6□□□□□ -0.87
USP3-AS1-206ENST00000560350 CUEDC1Q9NWM3 386 aaPredicted RBP9.6□□□□□ -0.87
USP3-AS1-206ENST00000560350 ATP6V0A2Q9Y487 856 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms