RNA–Protein interactions for RNA: ENST00000560234.1

PCLAF-208, Transcript of PCNA clamp associated factor, human

TSL 2

Gene PCLAF, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCLAF-208	ENST00000560234	IRX6	P78412	446 aa	Predicted RBP	12.07	□□□□□ -0.48
PCLAF-208	ENST00000560234	RASGRF1	Q13972	1273 aa		12.07	□□□□□ -0.48
PCLAF-208	ENST00000560234	CCDC158	Q5M9N0	1113 aa		12.07	□□□□□ -0.48
PCLAF-208	ENST00000560234	DLK2	Q6UY11	383 aa		12.07	□□□□□ -0.48
PCLAF-208	ENST00000560234	RHPN1	Q8TCX5	695 aa		12.07	□□□□□ -0.48
PCLAF-208	ENST00000560234	DBNDD2	Q9BQY9	259 aa		12.07	□□□□□ -0.48
PCLAF-208	ENST00000560234	GPR108	Q9NPR9	543 aa		12.07	□□□□□ -0.48
PCLAF-208	ENST00000560234	PGAP2	Q9UHJ9	254 aa		12.07	□□□□□ -0.48
PCLAF-208	ENST00000560234	PCDHAC2	Q9Y5I4	1007 aa		12.07	□□□□□ -0.48
PCLAF-208	ENST00000560234	WNT10B	O00744	389 aa		12.06	□□□□□ -0.48
PCLAF-208	ENST00000560234	MYO1B	O43795	1136 aa		12.06	□□□□□ -0.48
PCLAF-208	ENST00000560234	RAB11FIP3	O75154	756 aa		12.06	□□□□□ -0.48
PCLAF-208	ENST00000560234	MMP14	P50281	582 aa		12.06	□□□□□ -0.48
PCLAF-208	ENST00000560234	ARSI	Q5FYB1	569 aa		12.06	□□□□□ -0.48
PCLAF-208	ENST00000560234	ZNF687	Q8N1G0	1237 aa		12.06	□□□□□ -0.48
PCLAF-208	ENST00000560234	CLASRP	Q8N2M8	674 aa	Known RBP	12.06	□□□□□ -0.48
PCLAF-208	ENST00000560234	EAF2	Q96CJ1	260 aa	Predicted RBP	12.06	□□□□□ -0.48
PCLAF-208	ENST00000560234	KIF1BP	Q96EK5	621 aa		12.06	□□□□□ -0.48
PCLAF-208	ENST00000560234	SNRK	Q9NRH2	765 aa		12.06	□□□□□ -0.48
PCLAF-208	ENST00000560234	TLR7	Q9NYK1	1049 aa	Known RBP	12.06	□□□□□ -0.48
PCLAF-208	ENST00000560234	ABCF2	Q9UG63	623 aa		12.06	□□□□□ -0.48
PCLAF-208	ENST00000560234	PCDHB15	Q9Y5E8	787 aa		12.06	□□□□□ -0.48
PCLAF-208	ENST00000560234	ZNF609	O15014	1411 aa		12.05	□□□□□ -0.48
PCLAF-208	ENST00000560234	SCN4A	P35499	1836 aa		12.05	□□□□□ -0.48
PCLAF-208	ENST00000560234	CLRN2	A0PK11	232 aa		12.05	□□□□□ -0.48
PCLAF-208	ENST00000560234	TMEM88B	A6NKF7	163 aa		12.05	□□□□□ -0.48
PCLAF-208	ENST00000560234	CELF2	O95319	508 aa	Known RBP	12.05	□□□□□ -0.48
PCLAF-208	ENST00000560234	LDHB	P07195	334 aa	Known RBP	12.05	□□□□□ -0.48
PCLAF-208	ENST00000560234	IFIT2	P09913	472 aa	Known RBP	12.05	□□□□□ -0.48
PCLAF-208	ENST00000560234	UQCRFS1P1	P0C7P4	283 aa		12.05	□□□□□ -0.48
PCLAF-208	ENST00000560234	CRK	P46108	304 aa		12.05	□□□□□ -0.48
PCLAF-208	ENST00000560234	PI16	Q6UXB8	463 aa		12.05	□□□□□ -0.48
PCLAF-208	ENST00000560234	EXOC6	Q8TAG9	804 aa		12.05	□□□□□ -0.48
PCLAF-208	ENST00000560234	VEZT	Q9HBM0	779 aa		12.05	□□□□□ -0.48
PCLAF-208	ENST00000560234	HMG20B	Q9P0W2	317 aa		12.05	□□□□□ -0.48
PCLAF-208	ENST00000560234	DBNL	Q9UJU6	430 aa	Known RBP	12.05	□□□□□ -0.48
PCLAF-208	ENST00000560234	ABT1	Q9ULW3	272 aa	Known RBP	12.05	□□□□□ -0.48
PCLAF-208	ENST00000560234	PASK	Q96RG2	1323 aa		12.05	□□□□□ -0.48
PCLAF-208	ENST00000560234	SCN9A	Q15858	1988 aa		12.05	□□□□□ -0.48
PCLAF-208	ENST00000560234	C2orf72	A6NCS6	295 aa		12.04	□□□□□ -0.48
PCLAF-208	ENST00000560234	SMARCA5	O60264	1052 aa	Predicted RBP	12.04	□□□□□ -0.48
PCLAF-208	ENST00000560234	PRDX5	P30044	214 aa		12.04	□□□□□ -0.48
PCLAF-208	ENST00000560234	PRAMEF18	Q5VWM3	479 aa		12.04	□□□□□ -0.48
PCLAF-208	ENST00000560234	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.04	□□□□□ -0.48
PCLAF-208	ENST00000560234	DZIP1	Q86YF9	867 aa	Known RBP	12.04	□□□□□ -0.48
PCLAF-208	ENST00000560234	SPATA5	Q8NB90	893 aa		12.04	□□□□□ -0.48
PCLAF-208	ENST00000560234	TEKT1	Q969V4	418 aa		12.04	□□□□□ -0.48
PCLAF-208	ENST00000560234	PRMT6	Q96LA8	375 aa	Predicted RBP	12.04	□□□□□ -0.48
PCLAF-208	ENST00000560234	RAI14	Q9P0K7	980 aa		12.04	□□□□□ -0.48
PCLAF-208	ENST00000560234	SERPINA10	Q9UK55	444 aa		12.04	□□□□□ -0.48
PCLAF-208	ENST00000560234	MAST3	O60307	1309 aa		12.04	□□□□□ -0.48
PCLAF-208	ENST00000560234	ARID4A	P29374	1257 aa	Predicted RBP	12.03	□□□□□ -0.48
PCLAF-208	ENST00000560234	DIXDC1	Q155Q3	683 aa		12.03	□□□□□ -0.48
PCLAF-208	ENST00000560234	SPTY2D1	Q68D10	685 aa	Predicted RBP	12.03	□□□□□ -0.48
PCLAF-208	ENST00000560234	TBC1D9	Q6ZT07	1266 aa		12.03	□□□□□ -0.48
PCLAF-208	ENST00000560234	ZGPAT	Q8N5A5	531 aa	Known RBP	12.03	□□□□□ -0.48
PCLAF-208	ENST00000560234	LRRCC1	Q9C099	1032 aa		12.03	□□□□□ -0.48
PCLAF-208	ENST00000560234	TDRD3	Q9H7E2	651 aa	Known RBP	12.03	□□□□□ -0.48
PCLAF-208	ENST00000560234	SUGT1	Q9Y2Z0	365 aa		12.03	□□□□□ -0.48
PCLAF-208	ENST00000560234	COL1A1	P02452	1464 aa	Predicted RBP	12.02	□□□□□ -0.48
PCLAF-208	ENST00000560234	MCAM	P43121	646 aa		12.02	□□□□□ -0.49
PCLAF-208	ENST00000560234	GRM1	Q13255	1194 aa		12.02	□□□□□ -0.49
PCLAF-208	ENST00000560234	CST9	Q5W186	159 aa		12.02	□□□□□ -0.49
PCLAF-208	ENST00000560234	ERICH6	Q7L0X2	663 aa		12.02	□□□□□ -0.49
PCLAF-208	ENST00000560234	APOBEC3F	Q8IUX4	373 aa	Known RBP	12.02	□□□□□ -0.49
PCLAF-208	ENST00000560234	MTMR14	Q8NCE2	650 aa		12.02	□□□□□ -0.49
PCLAF-208	ENST00000560234	CDCA5	Q96FF9	252 aa		12.02	□□□□□ -0.49
PCLAF-208	ENST00000560234	ZBED3	Q96IU2	234 aa	Predicted RBP	12.02	□□□□□ -0.49
PCLAF-208	ENST00000560234	LRP2BP	Q9P2M1	347 aa		12.02	□□□□□ -0.49
PCLAF-208	ENST00000560234	ZNF70	Q9UC06	446 aa	Predicted RBP	12.02	□□□□□ -0.49
PCLAF-208	ENST00000560234	MKRN1	Q9UHC7	482 aa	Known RBP	12.02	□□□□□ -0.49
PCLAF-208	ENST00000560234	AOX1	Q06278	1338 aa		12.02	□□□□□ -0.49
PCLAF-208	ENST00000560234		A0A1B0GUL6	1792 aa		12.01	□□□□□ -0.49
PCLAF-208	ENST00000560234	TCP10L2	B9ZVM9	353 aa		12.01	□□□□□ -0.49
PCLAF-208	ENST00000560234	ZAP70	P43403	619 aa		12.01	□□□□□ -0.49
PCLAF-208	ENST00000560234	CACNB3	P54284	484 aa		12.01	□□□□□ -0.49
PCLAF-208	ENST00000560234	HDLBP	Q00341	1268 aa	Known RBP	12.01	□□□□□ -0.49
PCLAF-208	ENST00000560234	TTLL12	Q14166	644 aa	Predicted RBP	12.01	□□□□□ -0.49
PCLAF-208	ENST00000560234	KHSRP	Q92945	711 aa	Known RBP eCLIP	12.01	□□□□□ -0.49	7e-8	■■■□□ 15.6
PCLAF-208	ENST00000560234	DCTPP1	Q9H773	170 aa		12.01	□□□□□ -0.49
PCLAF-208	ENST00000560234	TMOD2	Q9NZR1	351 aa		12.01	□□□□□ -0.49
PCLAF-208	ENST00000560234	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.01	□□□□□ -0.49
PCLAF-208	ENST00000560234	PITPNM2	Q9BZ72	1349 aa		12.01	□□□□□ -0.49
PCLAF-208	ENST00000560234	SALL1	Q9NSC2	1324 aa		12.01	□□□□□ -0.49
PCLAF-208	ENST00000560234	NF2	P35240	595 aa		12	□□□□□ -0.49
PCLAF-208	ENST00000560234	PRKG1	Q13976	671 aa		12	□□□□□ -0.49
PCLAF-208	ENST00000560234	HHIPL2	Q6UWX4	724 aa		12	□□□□□ -0.49
PCLAF-208	ENST00000560234	C2orf69	Q8N8R5	385 aa		12	□□□□□ -0.49
PCLAF-208	ENST00000560234	ZDHHC15	Q96MV8	337 aa		12	□□□□□ -0.49
PCLAF-208	ENST00000560234	DEFB129	Q9H1M3	183 aa		12	□□□□□ -0.49
PCLAF-208	ENST00000560234	DAGLA	Q9Y4D2	1042 aa		12	□□□□□ -0.49
PCLAF-208	ENST00000560234	NDUFB9	Q9Y6M9	179 aa		12	□□□□□ -0.49
PCLAF-208	ENST00000560234	PDS5A	Q29RF7	1337 aa	Known RBP	12	□□□□□ -0.49
PCLAF-208	ENST00000560234	MECOM	Q03112	1051 aa		11.99	□□□□□ -0.49
PCLAF-208	ENST00000560234	AAMP	Q13685	434 aa		11.99	□□□□□ -0.49
PCLAF-208	ENST00000560234	RASA3	Q14644	834 aa		11.99	□□□□□ -0.49
PCLAF-208	ENST00000560234	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.99	□□□□□ -0.49
PCLAF-208	ENST00000560234	SLF2	Q8IX21	1173 aa		11.99	□□□□□ -0.49
PCLAF-208	ENST00000560234	DNAJC2	Q99543	621 aa	Known RBP	11.99	□□□□□ -0.49
PCLAF-208	ENST00000560234	MRI	Q9BWK5	157 aa		11.99	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms