RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 ANGEL2Q5VTE6 544 aaKnown RBP14.58□□□□□ -0.08
RABGGTA-215ENST00000560207 APOBEC3HQ6NTF7 200 aaKnown RBP14.58□□□□□ -0.08
RABGGTA-215ENST00000560207 PLEKHM2Q8IWE5 1019 aa14.58□□□□□ -0.08
RABGGTA-215ENST00000560207 PIH1D3Q9NQM4 214 aaKnown RBP14.58□□□□□ -0.08
RABGGTA-215ENST00000560207 GGA3Q9NZ52 723 aa14.58□□□□□ -0.08
RABGGTA-215ENST00000560207 RFX7Q2KHR2 1363 aa14.58□□□□□ -0.08
RABGGTA-215ENST00000560207 SHTN1A0MZ66 631 aa14.57□□□□□ -0.08
RABGGTA-215ENST00000560207 GRIK5Q16478 980 aa14.57□□□□□ -0.08
RABGGTA-215ENST00000560207 SUPT20HL1Q3ZLR7 823 aa14.57□□□□□ -0.08
RABGGTA-215ENST00000560207 ZNF70Q9UC06 446 aaPredicted RBP14.57□□□□□ -0.08
RABGGTA-215ENST00000560207 CDK5RAP2Q96SN8 1893 aa14.57□□□□□ -0.08
RABGGTA-215ENST00000560207 HIP1O00291 1037 aa14.56□□□□□ -0.08
RABGGTA-215ENST00000560207 ENTPD3O75355 529 aa14.56□□□□□ -0.08
RABGGTA-215ENST00000560207 ITGBL1O95965 494 aaPredicted RBP14.56□□□□□ -0.08
RABGGTA-215ENST00000560207 EGFRP00533 1210 aa14.56□□□□□ -0.08
RABGGTA-215ENST00000560207 CYP7A1P22680 504 aa14.56□□□□□ -0.08
RABGGTA-215ENST00000560207 FKBP1BP68106 108 aa14.56□□□□□ -0.08
RABGGTA-215ENST00000560207 DIXDC1Q155Q3 683 aa14.56□□□□□ -0.08
RABGGTA-215ENST00000560207 MAGEB6Q8N7X4 407 aa14.56□□□□□ -0.08
RABGGTA-215ENST00000560207 IDI2Q9BXS1 227 aa14.56□□□□□ -0.08
RABGGTA-215ENST00000560207 ANTXR1Q9H6X2 564 aa14.56□□□□□ -0.08
RABGGTA-215ENST00000560207 TDRD3Q9H7E2 651 aaKnown RBP14.56□□□□□ -0.08
RABGGTA-215ENST00000560207 USP40Q9NVE5 1235 aa14.56□□□□□ -0.08
RABGGTA-215ENST00000560207 TAOK2Q9UL54 1235 aa14.56□□□□□ -0.08
RABGGTA-215ENST00000560207 RPAP1Q9BWH6 1393 aaPredicted RBP14.56□□□□□ -0.08
RABGGTA-215ENST00000560207 UNCXA6NJT0 531 aa14.55□□□□□ -0.08
RABGGTA-215ENST00000560207 PDE6AP16499 860 aa14.55□□□□□ -0.08
RABGGTA-215ENST00000560207 ADD2P35612 726 aa14.55□□□□□ -0.08
RABGGTA-215ENST00000560207 BTDP43251 543 aa14.55□□□□□ -0.08
RABGGTA-215ENST00000560207 C1QTNF8P60827 252 aa14.55□□□□□ -0.08
RABGGTA-215ENST00000560207 MAP1SQ66K74 1059 aaPredicted RBP14.55□□□□□ -0.08
RABGGTA-215ENST00000560207 DEFB129Q9H1M3 183 aa14.55□□□□□ -0.08
RABGGTA-215ENST00000560207 COL2A1P02458 1487 aaPredicted RBP14.55□□□□□ -0.08
RABGGTA-215ENST00000560207 RNF113AO15541 343 aaKnown RBP14.54□□□□□ -0.08
RABGGTA-215ENST00000560207 POTEIP0CG38 1075 aa14.54□□□□□ -0.08
RABGGTA-215ENST00000560207 POTEJP0CG39 1038 aa14.54□□□□□ -0.08
RABGGTA-215ENST00000560207 CDC42EP5Q6NZY7 148 aa14.54□□□□□ -0.08
RABGGTA-215ENST00000560207 OTUD7AQ8TE49 926 aaPredicted RBP14.54□□□□□ -0.08
RABGGTA-215ENST00000560207 FAM151AQ8WW52 585 aa14.54□□□□□ -0.08
RABGGTA-215ENST00000560207 FSD1Q9BTV5 496 aa14.54□□□□□ -0.08
RABGGTA-215ENST00000560207 VEZTQ9HBM0 779 aa14.54□□□□□ -0.08
RABGGTA-215ENST00000560207 PASKQ96RG2 1323 aa14.54□□□□□ -0.08
RABGGTA-215ENST00000560207 MYH1P12882 1939 aa14.54□□□□□ -0.08
RABGGTA-215ENST00000560207 ZNF532Q9HCE3 1301 aa14.53□□□□□ -0.08
RABGGTA-215ENST00000560207 MAGEB6P1A0A0J9YX57 407 aa14.53□□□□□ -0.08
RABGGTA-215ENST00000560207 TRIM6-TRIM34B2RNG4 842 aa14.53□□□□□ -0.08
RABGGTA-215ENST00000560207 GNAT2P19087 354 aa14.53□□□□□ -0.08
RABGGTA-215ENST00000560207 USP48Q86UV5 1035 aa14.53□□□□□ -0.08
RABGGTA-215ENST00000560207 ZNF384Q8TF68 577 aa14.53□□□□□ -0.08
RABGGTA-215ENST00000560207 APPBP2Q92624 585 aa14.53□□□□□ -0.08
RABGGTA-215ENST00000560207 DDRGK1Q96HY6 314 aa14.53□□□□□ -0.08
RABGGTA-215ENST00000560207 DHX36Q9H2U1 1008 aaKnown RBP14.53□□□□□ -0.08
RABGGTA-215ENST00000560207 CLRN2A0PK11 232 aa14.52□□□□□ -0.09
RABGGTA-215ENST00000560207 PPP1R12BO60237 982 aaPredicted RBP14.52□□□□□ -0.09
RABGGTA-215ENST00000560207 APLP1P51693 650 aa14.52□□□□□ -0.09
RABGGTA-215ENST00000560207 MFAP1P55081 439 aaKnown RBP14.52□□□□□ -0.09
RABGGTA-215ENST00000560207 TTC22Q5TAA0 569 aa14.52□□□□□ -0.09
RABGGTA-215ENST00000560207 TEX11Q8IYF3 940 aa14.52□□□□□ -0.09
RABGGTA-215ENST00000560207 C2orf69Q8N8R5 385 aa14.52□□□□□ -0.09
RABGGTA-215ENST00000560207 AIDAQ96BJ3 306 aa14.52□□□□□ -0.09
RABGGTA-215ENST00000560207 GLIS2Q9BZE0 524 aaPredicted RBP14.52□□□□□ -0.09
RABGGTA-215ENST00000560207 CRNKL1Q9BZJ0 848 aaKnown RBP14.52□□□□□ -0.09
RABGGTA-215ENST00000560207 AATFQ9NY61 560 aaKnown RBP eCLIP14.52□□□□□ -0.09
RABGGTA-215ENST00000560207 NDUFB9Q9Y6M9 179 aa14.52□□□□□ -0.09
RABGGTA-215ENST00000560207 TCRBV5S4A2TA0A5A2 114 aa14.51□□□□□ -0.09
RABGGTA-215ENST00000560207 TMEM88BA6NKF7 163 aa14.51□□□□□ -0.09
RABGGTA-215ENST00000560207 RHBDL3P58872 404 aa14.51□□□□□ -0.09
RABGGTA-215ENST00000560207 RASA3Q14644 834 aa14.51□□□□□ -0.09
RABGGTA-215ENST00000560207 TSHZ3Q63HK5 1081 aa14.51□□□□□ -0.09
RABGGTA-215ENST00000560207 DCAF15Q66K64 600 aa14.51□□□□□ -0.09
RABGGTA-215ENST00000560207 HELLSQ9NRZ9 838 aa14.51□□□□□ -0.09
RABGGTA-215ENST00000560207 ATP8A2Q9NTI2 1148 aa14.51□□□□□ -0.09
RABGGTA-215ENST00000560207 PAPPA2Q9BXP8 1791 aa14.51□□□□□ -0.09
RABGGTA-215ENST00000560207 TCP10L2B9ZVM9 353 aa14.5□□□□□ -0.09
RABGGTA-215ENST00000560207 PDE4AP27815 886 aa14.5□□□□□ -0.09
RABGGTA-215ENST00000560207 AMOTL1Q8IY63 956 aa14.5□□□□□ -0.09
RABGGTA-215ENST00000560207 RILPL2Q969X0 211 aa14.5□□□□□ -0.09
RABGGTA-215ENST00000560207 EDC3Q96F86 508 aaKnown RBP14.5□□□□□ -0.09
RABGGTA-215ENST00000560207 CDCA5Q96FF9 252 aa14.5□□□□□ -0.09
RABGGTA-215ENST00000560207 HHIPL1Q96JK4 782 aa14.5□□□□□ -0.09
RABGGTA-215ENST00000560207 CREBZFQ9NS37 354 aa14.5□□□□□ -0.09
RABGGTA-215ENST00000560207 ATRNL1Q5VV63 1379 aa14.49□□□□□ -0.09
RABGGTA-215ENST00000560207 ASTN2O75129 1339 aaPredicted RBP14.49□□□□□ -0.09
RABGGTA-215ENST00000560207 NAV1Q8NEY1 1877 aa14.49□□□□□ -0.09
RABGGTA-215ENST00000560207 WDHD1O75717 1129 aaPredicted RBP14.49□□□□□ -0.09
RABGGTA-215ENST00000560207 HSPA6P17066 643 aa14.49□□□□□ -0.09
RABGGTA-215ENST00000560207 RGS3P49796 1198 aa14.49□□□□□ -0.09
RABGGTA-215ENST00000560207 GIMAP6Q6P9H5 292 aa14.49□□□□□ -0.09
RABGGTA-215ENST00000560207 ARMC9Q7Z3E5 817 aa14.49□□□□□ -0.09
RABGGTA-215ENST00000560207 RUFY2Q8WXA3 655 aa14.49□□□□□ -0.09
RABGGTA-215ENST00000560207 RIOK1Q9BRS2 568 aaKnown RBP14.49□□□□□ -0.09
RABGGTA-215ENST00000560207 PCDHAC2Q9Y5I4 1007 aa14.49□□□□□ -0.09
RABGGTA-215ENST00000560207 ADM5C9JUS6 153 aa14.48□□□□□ -0.09
RABGGTA-215ENST00000560207 CELF2O95319 508 aaKnown RBP14.48□□□□□ -0.09
RABGGTA-215ENST00000560207 HLA-DOAP06340 250 aa14.48□□□□□ -0.09
RABGGTA-215ENST00000560207 USP5P45974 858 aa14.48□□□□□ -0.09
RABGGTA-215ENST00000560207 BMP2KLQ5H9B9 411 aa14.48□□□□□ -0.09
RABGGTA-215ENST00000560207 ZMYM1Q5SVZ6 1142 aa14.48□□□□□ -0.09
RABGGTA-215ENST00000560207 ADGRA1Q86SQ6 560 aa14.48□□□□□ -0.09
RABGGTA-215ENST00000560207 TTC6Q86TZ1 520 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms