RNA–Protein interactions for RNA: ENST00000560004.5

RORA-212, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-212ENST00000560004 LAMA4Q16363 1823 aa13.79□□□□□ -0.2
RORA-212ENST00000560004 WNT10BO00744 389 aa13.79□□□□□ -0.2
RORA-212ENST00000560004 MMP14P50281 582 aa13.79□□□□□ -0.2
RORA-212ENST00000560004 HIRAP54198 1017 aaPredicted RBP13.79□□□□□ -0.2
RORA-212ENST00000560004 RHBDL3P58872 404 aa13.79□□□□□ -0.2
RORA-212ENST00000560004 DYNLL1P63167 89 aaKnown RBP13.79□□□□□ -0.2
RORA-212ENST00000560004 TBC1D10BQ4KMP7 808 aaPredicted RBP13.79□□□□□ -0.2
RORA-212ENST00000560004 ZNF589Q86UQ0 364 aaPredicted RBP13.79□□□□□ -0.2
RORA-212ENST00000560004 LCORLQ8N3X6 602 aa13.79□□□□□ -0.2
RORA-212ENST00000560004 OGFOD1Q8N543 542 aa13.79□□□□□ -0.2
RORA-212ENST00000560004 PRMT6Q96LA8 375 aaPredicted RBP13.79□□□□□ -0.2
RORA-212ENST00000560004 ADARB2Q9NS39 739 aaKnown RBP13.79□□□□□ -0.2
RORA-212ENST00000560004 HACL1Q9UJ83 578 aa13.79□□□□□ -0.2
RORA-212ENST00000560004 ASTN2O75129 1339 aaPredicted RBP13.79□□□□□ -0.2
RORA-212ENST00000560004 BAZ2AQ9UIF9 1905 aaKnown RBP13.78□□□□□ -0.2
RORA-212ENST00000560004 FOXP2O15409 715 aa13.78□□□□□ -0.2
RORA-212ENST00000560004 CDC45O75419 566 aa13.78□□□□□ -0.2
RORA-212ENST00000560004 MBD4O95243 580 aa13.78□□□□□ -0.2
RORA-212ENST00000560004 LMOD1P29536 600 aaPredicted RBP13.78□□□□□ -0.2
RORA-212ENST00000560004 PPP4CP60510 307 aa13.78□□□□□ -0.2
RORA-212ENST00000560004 NBPF9Q3BBW0 867 aa13.78□□□□□ -0.2
RORA-212ENST00000560004 CCDC129Q6ZRS4 1044 aa13.78□□□□□ -0.2
RORA-212ENST00000560004 TAF1DQ9H5J8 278 aaPredicted RBP13.78□□□□□ -0.2
RORA-212ENST00000560004 AATFQ9NY61 560 aaKnown RBP eCLIP13.78□□□□□ -0.2
RORA-212ENST00000560004 H7C1D1 291 aa13.77□□□□□ -0.21
RORA-212ENST00000560004 HIP1O00291 1037 aa13.77□□□□□ -0.21
RORA-212ENST00000560004 LDHCP07864 332 aa13.77□□□□□ -0.21
RORA-212ENST00000560004 MYH1P12882 1939 aa13.77□□□□□ -0.21
RORA-212ENST00000560004 EPHX2P34913 555 aa13.77□□□□□ -0.21
RORA-212ENST00000560004 DLGAP5Q15398 846 aa13.77□□□□□ -0.21
RORA-212ENST00000560004 LRRFIP1Q32MZ4 808 aaKnown RBP13.77□□□□□ -0.21
RORA-212ENST00000560004 CDC42EP5Q6NZY7 148 aa13.77□□□□□ -0.21
RORA-212ENST00000560004 CWC27Q6UX04 472 aaKnown RBP13.77□□□□□ -0.21
RORA-212ENST00000560004 SLF2Q8IX21 1173 aa13.77□□□□□ -0.21
RORA-212ENST00000560004 SH3RF3Q8TEJ3 882 aaPredicted RBP13.77□□□□□ -0.21
RORA-212ENST00000560004 RAD50Q92878 1312 aa13.77□□□□□ -0.21
RORA-212ENST00000560004 ARMT1Q9H993 441 aa13.77□□□□□ -0.21
RORA-212ENST00000560004 NMRK2Q9NPI5 230 aa13.77□□□□□ -0.21
RORA-212ENST00000560004 HELLSQ9NRZ9 838 aa13.77□□□□□ -0.21
RORA-212ENST00000560004 DIAPH3Q9NSV4 1193 aa13.77□□□□□ -0.21
RORA-212ENST00000560004 MAGEB6P1A0A0J9YX57 407 aa13.76□□□□□ -0.21
RORA-212ENST00000560004 IQCA1LA6NCM1 817 aa13.76□□□□□ -0.21
RORA-212ENST00000560004 SGSM2O43147 1006 aa13.76□□□□□ -0.21
RORA-212ENST00000560004 GPAA1O43292 621 aa13.76□□□□□ -0.21
RORA-212ENST00000560004 WDHD1O75717 1129 aaPredicted RBP13.76□□□□□ -0.21
RORA-212ENST00000560004 RBM5P52756 815 aaKnown RBP eCLIP13.76□□□□□ -0.212e-6■■□□□ 12.9
RORA-212ENST00000560004 SPDYE2Q495Y8 402 aa13.76□□□□□ -0.21
RORA-212ENST00000560004 C8orf34Q49A92 452 aa13.76□□□□□ -0.21
RORA-212ENST00000560004 ZNF526Q8TF50 670 aaPredicted RBP13.76□□□□□ -0.21
RORA-212ENST00000560004 STRBPQ96SI9 672 aaKnown RBP13.76□□□□□ -0.21
RORA-212ENST00000560004 TDRD3Q9H7E2 651 aaKnown RBP13.76□□□□□ -0.21
RORA-212ENST00000560004 POLR2AP24928 1970 aaKnown RBP13.76□□□□□ -0.21
RORA-212ENST00000560004 CCDC171Q6TFL3 1326 aa13.75□□□□□ -0.21
RORA-212ENST00000560004 CLRN2A0PK11 232 aa13.75□□□□□ -0.21
RORA-212ENST00000560004 POTEIP0CG38 1075 aa13.75□□□□□ -0.21
RORA-212ENST00000560004 POTEJP0CG39 1038 aa13.75□□□□□ -0.21
RORA-212ENST00000560004 CACNB3P54284 484 aa13.75□□□□□ -0.21
RORA-212ENST00000560004 NFIAQ12857 509 aa13.75□□□□□ -0.21
RORA-212ENST00000560004 MCMDC2Q4G0Z9 681 aa13.75□□□□□ -0.21
RORA-212ENST00000560004 RBM26Q5T8P6 1007 aaKnown RBP13.75□□□□□ -0.21
RORA-212ENST00000560004 USP50Q70EL3 339 aaPredicted RBP13.75□□□□□ -0.21
RORA-212ENST00000560004 AIDAQ96BJ3 306 aa13.75□□□□□ -0.21
RORA-212ENST00000560004 ESYT1Q9BSJ8 1104 aa13.75□□□□□ -0.21
RORA-212ENST00000560004 RRAGCQ9HB90 399 aa13.75□□□□□ -0.21
RORA-212ENST00000560004 EPB41L4AQ9HCS5 686 aaPredicted RBP13.75□□□□□ -0.21
RORA-212ENST00000560004 DDX4Q9NQI0 724 aaKnown RBP13.75□□□□□ -0.21
RORA-212ENST00000560004 COL2A1P02458 1487 aaPredicted RBP13.74□□□□□ -0.21
RORA-212ENST00000560004 CNTNAP1P78357 1384 aa13.74□□□□□ -0.21
RORA-212ENST00000560004 PAPPA2Q9BXP8 1791 aa13.74□□□□□ -0.21
RORA-212ENST00000560004 PRKAB2O43741 272 aa13.74□□□□□ -0.21
RORA-212ENST00000560004 VPS53Q5VIR6 699 aa13.74□□□□□ -0.21
RORA-212ENST00000560004 USP40Q9NVE5 1235 aa13.74□□□□□ -0.21
RORA-212ENST00000560004 GGA3Q9NZ52 723 aa13.74□□□□□ -0.21
RORA-212ENST00000560004 ZNF70Q9UC06 446 aaPredicted RBP13.74□□□□□ -0.21
RORA-212ENST00000560004 FAM198AQ9UFP1 575 aa13.74□□□□□ -0.21
RORA-212ENST00000560004 MKRN1Q9UHC7 482 aaKnown RBP13.74□□□□□ -0.21
RORA-212ENST00000560004 FLT1P17948 1338 aa13.73□□□□□ -0.21
RORA-212ENST00000560004 BAG3O95817 575 aa13.73□□□□□ -0.21
RORA-212ENST00000560004 ANGEL2Q5VTE6 544 aaKnown RBP13.73□□□□□ -0.21
RORA-212ENST00000560004 CERS3Q8IU89 383 aa13.73□□□□□ -0.21
RORA-212ENST00000560004 TEX11Q8IYF3 940 aa13.73□□□□□ -0.21
RORA-212ENST00000560004 SDR42E1Q8WUS8 393 aa13.73□□□□□ -0.21
RORA-212ENST00000560004 IDI2Q9BXS1 227 aa13.73□□□□□ -0.21
RORA-212ENST00000560004 SCAF8Q9UPN6 1271 aaKnown RBP13.73□□□□□ -0.21
RORA-212ENST00000560004 RPAP1Q9BWH6 1393 aaPredicted RBP13.72□□□□□ -0.21
RORA-212ENST00000560004 PITPNM2Q9BZ72 1349 aa13.72□□□□□ -0.21
RORA-212ENST00000560004 SSC5DA1L4H1 1573 aa13.72□□□□□ -0.21
RORA-212ENST00000560004 GSG1L2A8MUP6 293 aa13.72□□□□□ -0.21
RORA-212ENST00000560004 VEGFAP15692 232 aaPredicted RBP13.72□□□□□ -0.21
RORA-212ENST00000560004 PLCG2P16885 1265 aa13.72□□□□□ -0.21
RORA-212ENST00000560004 NOL10Q9BSC4 688 aaKnown RBP13.72□□□□□ -0.21
RORA-212ENST00000560004 PGAP2Q9UHJ9 254 aa13.72□□□□□ -0.21
RORA-212ENST00000560004 KIF3CO14782 793 aa13.71□□□□□ -0.21
RORA-212ENST00000560004 HSPD1P10809 573 aaKnown RBP13.71□□□□□ -0.21
RORA-212ENST00000560004 YY1P25490 414 aa13.71□□□□□ -0.21
RORA-212ENST00000560004 EAPPQ56P03 285 aaPredicted RBP13.71□□□□□ -0.21
RORA-212ENST00000560004 PNMA8AQ86V59 439 aaPredicted RBP13.71□□□□□ -0.21
RORA-212ENST00000560004 CDAN1Q8IWY9 1227 aa13.71□□□□□ -0.21
RORA-212ENST00000560004 ZFPM1Q8IX07 1006 aa13.71□□□□□ -0.21
RORA-212ENST00000560004 TGFBRAP1Q8WUH2 860 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms