RNA–Protein interactions for RNA: ENST00000559422.1

LRRC49-216, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 727 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-216ENST00000559422 USP48Q86UV5 1035 aa9.96□□□□□ -0.82
LRRC49-216ENST00000559422 RHOVQ96L33 236 aa9.96□□□□□ -0.82
LRRC49-216ENST00000559422 RUSC1Q9BVN2 902 aa9.96□□□□□ -0.82
LRRC49-216ENST00000559422 TMPRSS13Q9BYE2 586 aa9.96□□□□□ -0.82
LRRC49-216ENST00000559422 RNF208Q9H0X6 261 aa9.96□□□□□ -0.82
LRRC49-216ENST00000559422 CCDC86Q9H6F5 360 aaKnown RBP9.96□□□□□ -0.82
LRRC49-216ENST00000559422 DDX41Q9UJV9 622 aaKnown RBP9.96□□□□□ -0.82
LRRC49-216ENST00000559422 USP21Q9UK80 565 aa9.96□□□□□ -0.82
LRRC49-216ENST00000559422 TLR6Q9Y2C9 796 aa9.96□□□□□ -0.82
LRRC49-216ENST00000559422 SYNGAP1Q96PV0 1343 aa9.96□□□□□ -0.82
LRRC49-216ENST00000559422 PDE3AQ14432 1141 aa9.95□□□□□ -0.82
LRRC49-216ENST00000559422 CCDC84Q86UT8 332 aaPredicted RBP9.95□□□□□ -0.82
LRRC49-216ENST00000559422 DCAF5Q96JK2 942 aa9.95□□□□□ -0.82
LRRC49-216ENST00000559422 ZC3H12CQ9C0D7 883 aaKnown RBP9.95□□□□□ -0.82
LRRC49-216ENST00000559422 MINDY4BA8MYZ0 360 aa9.94□□□□□ -0.82
LRRC49-216ENST00000559422 CAMK2GQ13555 558 aaPredicted RBP9.94□□□□□ -0.82
LRRC49-216ENST00000559422 ADGRE1Q14246 886 aa9.94□□□□□ -0.82
LRRC49-216ENST00000559422 ZNF394Q53GI3 561 aa9.94□□□□□ -0.82
LRRC49-216ENST00000559422 TRIM42Q8IWZ5 723 aa9.94□□□□□ -0.82
LRRC49-216ENST00000559422 TGIF2Q9GZN2 237 aa9.94□□□□□ -0.82
LRRC49-216ENST00000559422 AKTIPQ9H8T0 292 aa9.94□□□□□ -0.82
LRRC49-216ENST00000559422 SUGCTQ9HAC7 445 aa9.94□□□□□ -0.82
LRRC49-216ENST00000559422 KCNQ5Q9NR82 932 aa9.94□□□□□ -0.82
LRRC49-216ENST00000559422 KRBA1A5PL33 1030 aa9.93□□□□□ -0.82
LRRC49-216ENST00000559422 F6X3S4 739 aa9.93□□□□□ -0.82
LRRC49-216ENST00000559422 ZNF862O60290 1169 aa9.93□□□□□ -0.82
LRRC49-216ENST00000559422 PF4P02776 101 aa9.93□□□□□ -0.82
LRRC49-216ENST00000559422 GSK3AP49840 483 aa9.93□□□□□ -0.82
LRRC49-216ENST00000559422 RAD51AP2Q09MP3 1159 aa9.93□□□□□ -0.82
LRRC49-216ENST00000559422 KIF4BQ2VIQ3 1234 aa9.93□□□□□ -0.82
LRRC49-216ENST00000559422 ZNF654Q8IZM8 581 aa9.93□□□□□ -0.82
LRRC49-216ENST00000559422 MIR1-1HGQ9H1L0 117 aa9.93□□□□□ -0.82
LRRC49-216ENST00000559422 PCDHB5Q9Y5E4 795 aa9.93□□□□□ -0.82
LRRC49-216ENST00000559422 AOC2O75106 756 aa9.92□□□□□ -0.82
LRRC49-216ENST00000559422 ERCC5P28715 1186 aaPredicted RBP9.92□□□□□ -0.82
LRRC49-216ENST00000559422 EIF4A3P38919 411 aaKnown RBP9.92□□□□□ -0.82
LRRC49-216ENST00000559422 RACK1P63244 317 aaKnown RBP9.92□□□□□ -0.82
LRRC49-216ENST00000559422 RASSF7Q02833 373 aa9.92□□□□□ -0.82
LRRC49-216ENST00000559422 NUTM2GQ5VZR2 741 aa9.92□□□□□ -0.82
LRRC49-216ENST00000559422 Q6ZS46 218 aa9.92□□□□□ -0.82
LRRC49-216ENST00000559422 SMG8Q8ND04 991 aaKnown RBP9.92□□□□□ -0.82
LRRC49-216ENST00000559422 GPBAR1Q8TDU6 330 aa9.92□□□□□ -0.82
LRRC49-216ENST00000559422 GAL3ST3Q96A11 431 aa9.92□□□□□ -0.82
LRRC49-216ENST00000559422 CYP4F12Q9HCS2 524 aa9.92□□□□□ -0.82
LRRC49-216ENST00000559422 SLFN14P0C7P3 912 aa9.91□□□□□ -0.82
LRRC49-216ENST00000559422 LIG1P18858 919 aa9.91□□□□□ -0.82
LRRC49-216ENST00000559422 MBTPS1Q14703 1052 aa9.91□□□□□ -0.82
LRRC49-216ENST00000559422 DIEXFQ68CQ4 756 aaKnown RBP9.91□□□□□ -0.82
LRRC49-216ENST00000559422 MPRIPQ6WCQ1 1025 aa9.91□□□□□ -0.82
LRRC49-216ENST00000559422 WFDC12Q8WWY7 111 aa9.91□□□□□ -0.82
LRRC49-216ENST00000559422 WDR89Q96FK6 387 aaPredicted RBP9.91□□□□□ -0.82
LRRC49-216ENST00000559422 WDR18Q9BV38 432 aa9.91□□□□□ -0.82
LRRC49-216ENST00000559422 RAD18Q9NS91 495 aa9.91□□□□□ -0.82
LRRC49-216ENST00000559422 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.91□□□□□ -0.82
LRRC49-216ENST00000559422 PCDHGB7Q9Y5F8 929 aa9.91□□□□□ -0.82
LRRC49-216ENST00000559422 GARTP22102 1010 aa9.9□□□□□ -0.82
LRRC49-216ENST00000559422 ANKRD34AQ69YU3 496 aa9.9□□□□□ -0.82
LRRC49-216ENST00000559422 AGGF1Q8N302 714 aaeCLIP9.9□□□□□ -0.82
LRRC49-216ENST00000559422 ACSBG1Q96GR2 724 aa9.9□□□□□ -0.82
LRRC49-216ENST00000559422 ADAMTS1Q9UHI8 967 aa9.9□□□□□ -0.82
LRRC49-216ENST00000559422 GREM1O60565 184 aa9.89□□□□□ -0.83
LRRC49-216ENST00000559422 ALX3O95076 343 aa9.89□□□□□ -0.83
LRRC49-216ENST00000559422 NOS3P29474 1203 aa9.89□□□□□ -0.83
LRRC49-216ENST00000559422 PTPN11Q06124 597 aaPredicted RBP9.89□□□□□ -0.83
LRRC49-216ENST00000559422 SEPT6Q14141 434 aa9.89□□□□□ -0.83
LRRC49-216ENST00000559422 FBXL19Q6PCT2 694 aa9.89□□□□□ -0.83
LRRC49-216ENST00000559422 CD163Q86VB7 1156 aa9.89□□□□□ -0.83
LRRC49-216ENST00000559422 GOLM1Q8NBJ4 401 aa9.89□□□□□ -0.83
LRRC49-216ENST00000559422 ZNF296Q8WUU4 475 aaPredicted RBP9.89□□□□□ -0.83
LRRC49-216ENST00000559422 CEP41Q9BYV8 373 aa9.89□□□□□ -0.83
LRRC49-216ENST00000559422 SUPT16HQ9Y5B9 1047 aaKnown RBP9.89□□□□□ -0.83
LRRC49-216ENST00000559422 TIAF1O95411 115 aa9.88□□□□□ -0.83
LRRC49-216ENST00000559422 CHRNA4P43681 627 aa9.88□□□□□ -0.83
LRRC49-216ENST00000559422 IREB2P48200 963 aaKnown RBP9.88□□□□□ -0.83
LRRC49-216ENST00000559422 FAM160A1Q05DH4 1040 aa9.88□□□□□ -0.83
LRRC49-216ENST00000559422 SNAP47Q5SQN1 464 aa9.88□□□□□ -0.83
LRRC49-216ENST00000559422 FDX2Q6P4F2 183 aa9.88□□□□□ -0.83
LRRC49-216ENST00000559422 TXNRD3Q86VQ6 643 aa9.88□□□□□ -0.83
LRRC49-216ENST00000559422 GATAD2BQ8WXI9 593 aa9.88□□□□□ -0.83
LRRC49-216ENST00000559422 SPON2Q9BUD6 331 aa9.88□□□□□ -0.83
LRRC49-216ENST00000559422 PCDHA4Q9UN74 947 aa9.88□□□□□ -0.83
LRRC49-216ENST00000559422 PCDHGC5Q9Y5F6 944 aa9.88□□□□□ -0.83
LRRC49-216ENST00000559422 ROBO2Q9HCK4 1378 aa9.88□□□□□ -0.83
LRRC49-216ENST00000559422 FAM221AA4D161 298 aa9.87□□□□□ -0.83
LRRC49-216ENST00000559422 C1QTNF9BB2RNN3 333 aa9.87□□□□□ -0.83
LRRC49-216ENST00000559422 SOX4Q06945 474 aaPredicted RBP9.87□□□□□ -0.83
LRRC49-216ENST00000559422 ZC3H12AQ5D1E8 599 aaKnown RBP9.87□□□□□ -0.83
LRRC49-216ENST00000559422 BNC2Q6ZN30 1099 aaPredicted RBP9.87□□□□□ -0.83
LRRC49-216ENST00000559422 FAM196AQ6ZSG2 479 aa9.87□□□□□ -0.83
LRRC49-216ENST00000559422 KIAA0825Q8IV33 1275 aa9.87□□□□□ -0.83
LRRC49-216ENST00000559422 JARID2Q92833 1246 aaPredicted RBP9.87□□□□□ -0.83
LRRC49-216ENST00000559422 CCSER2Q9H7U1 834 aa9.87□□□□□ -0.83
LRRC49-216ENST00000559422 CILPO75339 1184 aa9.86□□□□□ -0.83
LRRC49-216ENST00000559422 GDF11O95390 407 aa9.86□□□□□ -0.83
LRRC49-216ENST00000559422 F13A1P00488 732 aa9.86□□□□□ -0.83
LRRC49-216ENST00000559422 ADH5P11766 374 aa9.86□□□□□ -0.83
LRRC49-216ENST00000559422 AKAP4Q5JQC9 854 aa9.86□□□□□ -0.83
LRRC49-216ENST00000559422 DZIP1LQ8IYY4 767 aaKnown RBP9.86□□□□□ -0.83
LRRC49-216ENST00000559422 C12orf50Q8NA57 414 aaPredicted RBP9.86□□□□□ -0.83
LRRC49-216ENST00000559422 NT5C1AQ9BXI3 368 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms