RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 FEZ1Q99689 392 aa19.2■□□□□ 0.66
SPG11-215ENST00000559193 CGNQ9P2M7 1197 aaKnown RBP19.2■□□□□ 0.66
SPG11-215ENST00000559193 HPSEQ9Y251 543 aa19.2■□□□□ 0.66
SPG11-215ENST00000559193 B4E1Z4 1266 aa19.2■□□□□ 0.66
SPG11-215ENST00000559193 IDH1O75874 414 aaKnown RBP19.2■□□□□ 0.66
SPG11-215ENST00000559193 PTPAQ15257 358 aa19.2■□□□□ 0.66
SPG11-215ENST00000559193 TTF1Q15361 905 aaPredicted RBP19.2■□□□□ 0.66
SPG11-215ENST00000559193 UBE3CQ15386 1083 aa19.2■□□□□ 0.66
SPG11-215ENST00000559193 SHC4Q6S5L8 630 aa19.2■□□□□ 0.66
SPG11-215ENST00000559193 PHKBQ93100 1093 aa19.2■□□□□ 0.66
SPG11-215ENST00000559193 TIGD1Q96MW7 591 aa19.2■□□□□ 0.66
SPG11-215ENST00000559193 HSD3B7Q9H2F3 369 aa19.2■□□□□ 0.66
SPG11-215ENST00000559193 STRN4Q9NRL3 753 aa19.2■□□□□ 0.66
SPG11-215ENST00000559193 CNNM1Q9NRU3 951 aa19.2■□□□□ 0.66
SPG11-215ENST00000559193 ZNF532Q9HCE3 1301 aa19.2■□□□□ 0.66
SPG11-215ENST00000559193 ECM29Q5VYK3 1845 aa19.2■□□□□ 0.66
SPG11-215ENST00000559193 CDKL5O76039 1030 aa19.19■□□□□ 0.66
SPG11-215ENST00000559193 SYKP43405 635 aa19.19■□□□□ 0.66
SPG11-215ENST00000559193 UTP14CQ5TAP6 766 aaKnown RBP19.19■□□□□ 0.66
SPG11-215ENST00000559193 MICU3Q86XE3 530 aa19.19■□□□□ 0.66
SPG11-215ENST00000559193 PIGBQ92521 554 aa19.19■□□□□ 0.66
SPG11-215ENST00000559193 BCL11BQ9C0K0 894 aaPredicted RBP19.19■□□□□ 0.66
SPG11-215ENST00000559193 TUBE1Q9UJT0 475 aa19.19■□□□□ 0.66
SPG11-215ENST00000559193 ANKRD18BA2A2Z9 1011 aa19.19■□□□□ 0.66
SPG11-215ENST00000559193 PPP6R2O75170 966 aa19.19■□□□□ 0.66
SPG11-215ENST00000559193 APPP05067 770 aa19.19■□□□□ 0.66
SPG11-215ENST00000559193 PDE6AP16499 860 aa19.19■□□□□ 0.66
SPG11-215ENST00000559193 TPM4P67936 248 aa19.19■□□□□ 0.66
SPG11-215ENST00000559193 ISM2Q6H9L7 571 aa19.19■□□□□ 0.66
SPG11-215ENST00000559193 TEX13AQ9BXU3 409 aaPredicted RBP19.19■□□□□ 0.66
SPG11-215ENST00000559193 WWC3Q9ULE0 1092 aa19.19■□□□□ 0.66
SPG11-215ENST00000559193 MYO5AQ9Y4I1 1855 aaKnown RBP19.19■□□□□ 0.66
SPG11-215ENST00000559193 IKBKBO14920 756 aa19.18■□□□□ 0.66
SPG11-215ENST00000559193 PHKA1P46020 1223 aa19.18■□□□□ 0.66
SPG11-215ENST00000559193 MAP3K14Q99558 947 aa19.18■□□□□ 0.66
SPG11-215ENST00000559193 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.18■□□□□ 0.66
SPG11-215ENST00000559193 ABCA3Q99758 1704 aa19.18■□□□□ 0.66
SPG11-215ENST00000559193 TCRBV5S4A2TA0A5A2 114 aa19.18■□□□□ 0.66
SPG11-215ENST00000559193 RANBP6O60518 1105 aaKnown RBP19.18■□□□□ 0.66
SPG11-215ENST00000559193 LMOD1P29536 600 aaPredicted RBP19.18■□□□□ 0.66
SPG11-215ENST00000559193 NTRK3Q16288 839 aa19.18■□□□□ 0.66
SPG11-215ENST00000559193 KIF18AQ8NI77 898 aa19.18■□□□□ 0.66
SPG11-215ENST00000559193 TAOK2Q9UL54 1235 aa19.18■□□□□ 0.66
SPG11-215ENST00000559193 ATP1A3P13637 1013 aa19.17■□□□□ 0.66
SPG11-215ENST00000559193 SFPQP23246 707 aaKnown RBP eCLIP19.17■□□□□ 0.66
SPG11-215ENST00000559193 FANCCQ00597 558 aa19.17■□□□□ 0.66
SPG11-215ENST00000559193 CCDC102BQ68D86 513 aa19.17■□□□□ 0.66
SPG11-215ENST00000559193 IGDCC4Q8TDY8 1250 aa19.17■□□□□ 0.66
SPG11-215ENST00000559193 PPP1R13BQ96KQ4 1090 aa19.17■□□□□ 0.66
SPG11-215ENST00000559193 FAM217BQ9NTX9 383 aaPredicted RBP19.17■□□□□ 0.66
SPG11-215ENST00000559193 XIRP1Q702N8 1843 aaKnown RBP19.17■□□□□ 0.66
SPG11-215ENST00000559193 FAM237AA0A1B0GTK4 181 aa19.17■□□□□ 0.66
SPG11-215ENST00000559193 PDE8BO95263 885 aa19.17■□□□□ 0.66
SPG11-215ENST00000559193 STARD3NLO95772 234 aa19.17■□□□□ 0.66
SPG11-215ENST00000559193 ARID4AP29374 1257 aaPredicted RBP19.17■□□□□ 0.66
SPG11-215ENST00000559193 TMEM87BQ96K49 555 aa19.17■□□□□ 0.66
SPG11-215ENST00000559193 LY9Q9HBG7 655 aa19.17■□□□□ 0.66
SPG11-215ENST00000559193 SOS2Q07890 1332 aaPredicted RBP19.16■□□□□ 0.66
SPG11-215ENST00000559193 KIF2AO00139 706 aaPredicted RBP19.16■□□□□ 0.66
SPG11-215ENST00000559193 IRS4O14654 1257 aaPredicted RBP19.16■□□□□ 0.66
SPG11-215ENST00000559193 ZBTB43O43298 467 aa19.16■□□□□ 0.66
SPG11-215ENST00000559193 RESP18Q5W5W9 173 aa19.16■□□□□ 0.66
SPG11-215ENST00000559193 CPLX2Q6PUV4 134 aaKnown RBP19.16■□□□□ 0.66
SPG11-215ENST00000559193 MYL10Q9BUA6 226 aa19.16■□□□□ 0.66
SPG11-215ENST00000559193 INCENPQ9NQS7 918 aa19.16■□□□□ 0.66
SPG11-215ENST00000559193 OGFRQ9NZT2 677 aa19.16■□□□□ 0.66
SPG11-215ENST00000559193 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.16■□□□□ 0.66
SPG11-215ENST00000559193 V9GYY5 206 aaPredicted RBP19.16■□□□□ 0.66
SPG11-215ENST00000559193 UBN2Q6ZU65 1347 aa19.16■□□□□ 0.66
SPG11-215ENST00000559193 UBE2Q2LH0YL09 131 aa19.16■□□□□ 0.66
SPG11-215ENST00000559193 KCNJ6P48051 423 aa19.16■□□□□ 0.66
SPG11-215ENST00000559193 JMYQ8N9B5 988 aa19.16■□□□□ 0.66
SPG11-215ENST00000559193 ERO1AQ96HE7 468 aa19.16■□□□□ 0.66
SPG11-215ENST00000559193 CLIC6Q96NY7 704 aa19.16■□□□□ 0.66
SPG11-215ENST00000559193 STRBPQ96SI9 672 aaKnown RBP19.16■□□□□ 0.66
SPG11-215ENST00000559193 GOLGA8AA7E2F4 631 aa19.15■□□□□ 0.66
SPG11-215ENST00000559193 PNOCQ13519 176 aa19.15■□□□□ 0.66
SPG11-215ENST00000559193 GNL2Q13823 731 aaKnown RBP19.15■□□□□ 0.66
SPG11-215ENST00000559193 SGMS1Q86VZ5 419 aa19.15■□□□□ 0.66
SPG11-215ENST00000559193 EPB41L4AQ9HCS5 686 aaPredicted RBP19.15■□□□□ 0.66
SPG11-215ENST00000559193 LRP6O75581 1613 aa19.15■□□□□ 0.66
SPG11-215ENST00000559193 PSDA5PKW4 1024 aaPredicted RBP19.15■□□□□ 0.66
SPG11-215ENST00000559193 IARSP41252 1262 aaKnown RBP19.15■□□□□ 0.66
SPG11-215ENST00000559193 DDX41Q9UJV9 622 aaKnown RBP19.15■□□□□ 0.66
SPG11-215ENST00000559193 TBC1D2BQ9UPU7 963 aa19.15■□□□□ 0.66
SPG11-215ENST00000559193 LRP5O75197 1615 aa19.15■□□□□ 0.66
SPG11-215ENST00000559193 TMEM67Q5HYA8 995 aa19.14■□□□□ 0.65
SPG11-215ENST00000559193 NFXL1Q6ZNB6 911 aa19.14■□□□□ 0.65
SPG11-215ENST00000559193 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.14■□□□□ 0.65
SPG11-215ENST00000559193 MYH3P11055 1940 aa19.14■□□□□ 0.65
SPG11-215ENST00000559193 ANKRD36CQ5JPF3 1778 aa19.14■□□□□ 0.65
SPG11-215ENST00000559193 METTL16Q86W50 562 aaKnown RBP19.14■□□□□ 0.65
SPG11-215ENST00000559193 DPF2Q92785 391 aa19.14■□□□□ 0.65
SPG11-215ENST00000559193 AIDAQ96BJ3 306 aa19.14■□□□□ 0.65
SPG11-215ENST00000559193 GTPBP4Q9BZE4 634 aaKnown RBP19.14■□□□□ 0.65
SPG11-215ENST00000559193 TACC3Q9Y6A5 838 aa19.14■□□□□ 0.65
SPG11-215ENST00000559193 SLU7O95391 586 aaKnown RBP19.13■□□□□ 0.65
SPG11-215ENST00000559193 UQCRFS1P1P0C7P4 283 aa19.13■□□□□ 0.65
SPG11-215ENST00000559193 EVA1CP58658 441 aa19.13■□□□□ 0.65
SPG11-215ENST00000559193 MYL5Q02045 173 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms