RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 JAG2Q9Y219 1238 aa9.2□□□□□ -0.94
LRRC28-211ENST00000558890 PCDHAC2Q9Y5I4 1007 aa9.2□□□□□ -0.94
LRRC28-211ENST00000558890 G3V3G9 751 aa9.19□□□□□ -0.94
LRRC28-211ENST00000558890 HIP1O00291 1037 aa9.19□□□□□ -0.94
LRRC28-211ENST00000558890 WNT10BO00744 389 aa9.19□□□□□ -0.94
LRRC28-211ENST00000558890 EPB41L2O43491 1005 aaKnown RBP9.19□□□□□ -0.94
LRRC28-211ENST00000558890 MAP4K4O95819 1239 aaPredicted RBP9.19□□□□□ -0.94
LRRC28-211ENST00000558890 ZFYP08048 801 aaPredicted RBP9.19□□□□□ -0.94
LRRC28-211ENST00000558890 LMOD1P29536 600 aaPredicted RBP9.19□□□□□ -0.94
LRRC28-211ENST00000558890 MCAMP43121 646 aa9.19□□□□□ -0.94
LRRC28-211ENST00000558890 MCM2P49736 904 aa9.19□□□□□ -0.94
LRRC28-211ENST00000558890 HDLBPQ00341 1268 aaKnown RBP9.19□□□□□ -0.94
LRRC28-211ENST00000558890 RASGRF1Q13972 1273 aa9.19□□□□□ -0.94
LRRC28-211ENST00000558890 SCARF1Q14162 830 aa9.19□□□□□ -0.94
LRRC28-211ENST00000558890 RAB3GAP1Q15042 981 aa9.19□□□□□ -0.94
LRRC28-211ENST00000558890 NBPF9Q3BBW0 867 aa9.19□□□□□ -0.94
LRRC28-211ENST00000558890 TBC1D10BQ4KMP7 808 aaPredicted RBP9.19□□□□□ -0.94
LRRC28-211ENST00000558890 DCAF8Q5TAQ9 597 aa9.19□□□□□ -0.94
LRRC28-211ENST00000558890 MAP1SQ66K74 1059 aaPredicted RBP9.19□□□□□ -0.94
LRRC28-211ENST00000558890 ZSCAN25Q6NSZ9 544 aa9.19□□□□□ -0.94
LRRC28-211ENST00000558890 DLK2Q6UY11 383 aa9.19□□□□□ -0.94
LRRC28-211ENST00000558890 CNTROBQ8N137 903 aa9.19□□□□□ -0.94
LRRC28-211ENST00000558890 RILPL2Q969X0 211 aa9.19□□□□□ -0.94
LRRC28-211ENST00000558890 CCDC8Q9H0W5 538 aaPredicted RBP9.19□□□□□ -0.94
LRRC28-211ENST00000558890 MYOZ2Q9NPC6 264 aa9.19□□□□□ -0.94
LRRC28-211ENST00000558890 TLR7Q9NYK1 1049 aaKnown RBP9.19□□□□□ -0.94
LRRC28-211ENST00000558890 SSUH2Q9Y2M2 353 aa9.19□□□□□ -0.94
LRRC28-211ENST00000558890 POLR2AP24928 1970 aaKnown RBP9.19□□□□□ -0.94
LRRC28-211ENST00000558890 HSPA6P17066 643 aa9.18□□□□□ -0.94
LRRC28-211ENST00000558890 ANAPC15P60006 121 aa9.18□□□□□ -0.94
LRRC28-211ENST00000558890 NUCB2P80303 420 aa9.18□□□□□ -0.94
LRRC28-211ENST00000558890 EAPPQ56P03 285 aaPredicted RBP9.18□□□□□ -0.94
LRRC28-211ENST00000558890 MFSD14BQ5SR56 506 aa9.18□□□□□ -0.94
LRRC28-211ENST00000558890 CST9Q5W186 159 aa9.18□□□□□ -0.94
LRRC28-211ENST00000558890 KIAA0825Q8IV33 1275 aa9.18□□□□□ -0.94
LRRC28-211ENST00000558890 SLF2Q8IX21 1173 aa9.18□□□□□ -0.94
LRRC28-211ENST00000558890 DNAJC5GQ8N7S2 189 aa9.18□□□□□ -0.94
LRRC28-211ENST00000558890 KBTBD3Q8NAB2 608 aa9.18□□□□□ -0.94
LRRC28-211ENST00000558890 PRMT6Q96LA8 375 aaPredicted RBP9.18□□□□□ -0.94
LRRC28-211ENST00000558890 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.18□□□□□ -0.94
LRRC28-211ENST00000558890 CWC22Q9HCG8 908 aaKnown RBP9.18□□□□□ -0.94
LRRC28-211ENST00000558890 PAG1Q9NWQ8 432 aa9.18□□□□□ -0.94
LRRC28-211ENST00000558890 HMG20BQ9P0W2 317 aa9.18□□□□□ -0.94
LRRC28-211ENST00000558890 FOCADQ5VW36 1801 aa9.17□□□□□ -0.94
LRRC28-211ENST00000558890 RAD50Q92878 1312 aa9.17□□□□□ -0.94
LRRC28-211ENST00000558890 TRAK2O60296 914 aa9.17□□□□□ -0.94
LRRC28-211ENST00000558890 CHMLP26374 656 aa9.17□□□□□ -0.94
LRRC28-211ENST00000558890 KIF4BQ2VIQ3 1234 aa9.17□□□□□ -0.94
LRRC28-211ENST00000558890 SKOR2Q2VWA4 1001 aaPredicted RBP9.17□□□□□ -0.94
LRRC28-211ENST00000558890 RBM26Q5T8P6 1007 aaKnown RBP9.17□□□□□ -0.94
LRRC28-211ENST00000558890 TSHZ3Q63HK5 1081 aa9.17□□□□□ -0.94
LRRC28-211ENST00000558890 APOBEC3HQ6NTF7 200 aaKnown RBP9.17□□□□□ -0.94
LRRC28-211ENST00000558890 PI16Q6UXB8 463 aa9.17□□□□□ -0.94
LRRC28-211ENST00000558890 TNPO1Q92973 898 aaKnown RBP9.17□□□□□ -0.94
LRRC28-211ENST00000558890 FAM163AQ96GL9 167 aaPredicted RBP9.17□□□□□ -0.94
LRRC28-211ENST00000558890 ANO2Q9NQ90 1003 aa9.17□□□□□ -0.94
LRRC28-211ENST00000558890 TAOK2Q9UL54 1235 aa9.17□□□□□ -0.94
LRRC28-211ENST00000558890 MYO5AQ9Y4I1 1855 aaKnown RBP9.17□□□□□ -0.94
LRRC28-211ENST00000558890 MYH2Q9UKX2 1941 aa9.16□□□□□ -0.94
LRRC28-211ENST00000558890 TRAF5O00463 557 aa9.16□□□□□ -0.94
LRRC28-211ENST00000558890 CD2BP2O95400 341 aaKnown RBP9.16□□□□□ -0.94
LRRC28-211ENST00000558890 GSTO1P78417 241 aa9.16□□□□□ -0.94
LRRC28-211ENST00000558890 MAP3K12Q12852 859 aa9.16□□□□□ -0.94
LRRC28-211ENST00000558890 CHAF1AQ13111 956 aaPredicted RBP9.16□□□□□ -0.94
LRRC28-211ENST00000558890 UBE3CQ15386 1083 aa9.16□□□□□ -0.94
LRRC28-211ENST00000558890 CFAP100Q494V2 611 aa9.16□□□□□ -0.94
LRRC28-211ENST00000558890 HHIPL2Q6UWX4 724 aa9.16□□□□□ -0.94
LRRC28-211ENST00000558890 USP48Q86UV5 1035 aa9.16□□□□□ -0.94
LRRC28-211ENST00000558890 RUFY2Q8WXA3 655 aa9.16□□□□□ -0.94
LRRC28-211ENST00000558890 GLIS2Q9BZE0 524 aaPredicted RBP9.16□□□□□ -0.94
LRRC28-211ENST00000558890 SNRKQ9NRH2 765 aa9.16□□□□□ -0.94
LRRC28-211ENST00000558890 SERPINA10Q9UK55 444 aa9.16□□□□□ -0.94
LRRC28-211ENST00000558890 RPAP1Q9BWH6 1393 aaPredicted RBP9.15□□□□□ -0.94
LRRC28-211ENST00000558890 GAKO14976 1311 aa9.15□□□□□ -0.94
LRRC28-211ENST00000558890 PITPNM2Q9BZ72 1349 aa9.15□□□□□ -0.94
LRRC28-211ENST00000558890 GOLGA6L3A6NEY3 463 aa9.15□□□□□ -0.94
LRRC28-211ENST00000558890 CYP2E1P05181 493 aaPredicted RBP9.15□□□□□ -0.94
LRRC28-211ENST00000558890 LDHCP07864 332 aa9.15□□□□□ -0.94
LRRC28-211ENST00000558890 PRDX5P30044 214 aa9.15□□□□□ -0.94
LRRC28-211ENST00000558890 ZAP70P43403 619 aa9.15□□□□□ -0.94
LRRC28-211ENST00000558890 APLP1P51693 650 aa9.15□□□□□ -0.94
LRRC28-211ENST00000558890 KIAA1211Q6ZU35 1233 aa9.15□□□□□ -0.94
LRRC28-211ENST00000558890 CDC37L1Q7L3B6 337 aa9.15□□□□□ -0.94
LRRC28-211ENST00000558890 FBXW7Q969H0 707 aa9.15□□□□□ -0.94
LRRC28-211ENST00000558890 ISY1Q9ULR0 285 aaKnown RBP9.15□□□□□ -0.94
LRRC28-211ENST00000558890 TTF2Q9UNY4 1162 aaKnown RBP9.15□□□□□ -0.94
LRRC28-211ENST00000558890 CLEC11AQ9Y240 323 aa9.15□□□□□ -0.94
LRRC28-211ENST00000558890 COL2A1P02458 1487 aaPredicted RBP9.15□□□□□ -0.95
LRRC28-211ENST00000558890 F8W031 263 aaPredicted RBP9.14□□□□□ -0.95
LRRC28-211ENST00000558890 LDHBP07195 334 aaKnown RBP9.14□□□□□ -0.95
LRRC28-211ENST00000558890 CRKP46108 304 aa9.14□□□□□ -0.95
LRRC28-211ENST00000558890 HTRA3P83110 453 aa9.14□□□□□ -0.95
LRRC28-211ENST00000558890 ANGEL2Q5VTE6 544 aaKnown RBP9.14□□□□□ -0.95
LRRC28-211ENST00000558890 OGFOD1Q8N543 542 aa9.14□□□□□ -0.95
LRRC28-211ENST00000558890 ZDHHC15Q96MV8 337 aa9.14□□□□□ -0.95
LRRC28-211ENST00000558890 BOLA2Q9H3K6 86 aa9.14□□□□□ -0.95
LRRC28-211ENST00000558890 DIAPH3Q9NSV4 1193 aa9.14□□□□□ -0.95
LRRC28-211ENST00000558890 GGA3Q9NZ52 723 aa9.14□□□□□ -0.95
LRRC28-211ENST00000558890 HDAC9Q9UKV0 1011 aa9.14□□□□□ -0.95
LRRC28-211ENST00000558890 SCAF8Q9UPN6 1271 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms