RNA–Protein interactions for RNA: ENST00000558881.1

EXD1-204, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

TSL 2

Gene EXD1, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-204ENST00000558881 SPATA31A6Q5VVP1 1343 aa10.25□□□□□ -0.77
EXD1-204ENST00000558881 PNMA6AP0CW24 399 aaPredicted RBP10.24□□□□□ -0.77
EXD1-204ENST00000558881 PLA2G4AP47712 749 aa10.24□□□□□ -0.77
EXD1-204ENST00000558881 TPM4P67936 248 aa10.24□□□□□ -0.77
EXD1-204ENST00000558881 SCARF1Q14162 830 aa10.24□□□□□ -0.77
EXD1-204ENST00000558881 GORABQ5T7V8 394 aa10.24□□□□□ -0.77
EXD1-204ENST00000558881 LUZP1Q86V48 1076 aa10.24□□□□□ -0.77
EXD1-204ENST00000558881 HOMEZQ8IX15 550 aa10.24□□□□□ -0.77
EXD1-204ENST00000558881 TRIM5Q9C035 493 aa10.24□□□□□ -0.77
EXD1-204ENST00000558881 L2HGDHQ9H9P8 463 aa10.24□□□□□ -0.77
EXD1-204ENST00000558881 CNNM1Q9NRU3 951 aa10.24□□□□□ -0.77
EXD1-204ENST00000558881 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.24□□□□□ -0.77
EXD1-204ENST00000558881 NIP7Q9Y221 180 aaKnown RBP eCLIP10.24□□□□□ -0.77
EXD1-204ENST00000558881 V9GYY5 206 aaPredicted RBP10.24□□□□□ -0.77
EXD1-204ENST00000558881 ELP1O95163 1332 aa10.24□□□□□ -0.77
EXD1-204ENST00000558881 SH3TC1Q8TE82 1336 aa10.24□□□□□ -0.77
EXD1-204ENST00000558881 HSPA1LP34931 641 aa10.24□□□□□ -0.77
EXD1-204ENST00000558881 FOXK1P85037 733 aa10.24□□□□□ -0.77
EXD1-204ENST00000558881 FKBP4Q02790 459 aaKnown RBP eCLIP10.24□□□□□ -0.77
EXD1-204ENST00000558881 PDE4DQ08499 809 aa10.24□□□□□ -0.77
EXD1-204ENST00000558881 MCMDC2Q4G0Z9 681 aa10.24□□□□□ -0.77
EXD1-204ENST00000558881 CCDC158Q5M9N0 1113 aa10.24□□□□□ -0.77
EXD1-204ENST00000558881 TTC39AQ5SRH9 613 aa10.24□□□□□ -0.77
EXD1-204ENST00000558881 LRRC8AQ8IWT6 810 aa10.24□□□□□ -0.77
EXD1-204ENST00000558881 CBX8Q9HC52 389 aa10.24□□□□□ -0.77
EXD1-204ENST00000558881 ZSWIM6Q9HCJ5 1215 aa10.24□□□□□ -0.77
EXD1-204ENST00000558881 SEC31BQ9NQW1 1179 aa10.24□□□□□ -0.77
EXD1-204ENST00000558881 RIC1Q4ADV7 1423 aa10.23□□□□□ -0.77
EXD1-204ENST00000558881 ZRANB2O95218 330 aaKnown RBP eCLIP10.23□□□□□ -0.77
EXD1-204ENST00000558881 NTSR2O95665 410 aa10.23□□□□□ -0.77
EXD1-204ENST00000558881 ZKSCAN1P17029 563 aaPredicted RBP10.23□□□□□ -0.77
EXD1-204ENST00000558881 CASQ1P31415 396 aa10.23□□□□□ -0.77
EXD1-204ENST00000558881 ICE2Q659A1 982 aa10.23□□□□□ -0.77
EXD1-204ENST00000558881 PI16Q6UXB8 463 aa10.23□□□□□ -0.77
EXD1-204ENST00000558881 SYT10Q6XYQ8 523 aa10.23□□□□□ -0.77
EXD1-204ENST00000558881 VGLL2Q8N8G2 317 aa10.23□□□□□ -0.77
EXD1-204ENST00000558881 HELBQ8NG08 1087 aaPredicted RBP10.23□□□□□ -0.77
EXD1-204ENST00000558881 GTF3C6Q969F1 213 aa10.23□□□□□ -0.77
EXD1-204ENST00000558881 TM6SF1Q9BZW5 370 aa10.23□□□□□ -0.77
EXD1-204ENST00000558881 NUP62CLQ9H1M0 184 aa10.23□□□□□ -0.77
EXD1-204ENST00000558881 PDRG1Q9NUG6 133 aa10.23□□□□□ -0.77
EXD1-204ENST00000558881 MYO1CO00159 1063 aa10.23□□□□□ -0.77
EXD1-204ENST00000558881 DTNBO60941 627 aa10.23□□□□□ -0.77
EXD1-204ENST00000558881 LARGE1O95461 756 aa10.23□□□□□ -0.77
EXD1-204ENST00000558881 ZAP70P43403 619 aa10.23□□□□□ -0.77
EXD1-204ENST00000558881 CLCN6P51797 869 aa10.23□□□□□ -0.77
EXD1-204ENST00000558881 CCDC144BQ3MJ40 725 aa10.23□□□□□ -0.77
EXD1-204ENST00000558881 MEX3CQ5U5Q3 659 aaKnown RBP10.23□□□□□ -0.77
EXD1-204ENST00000558881 RBM43Q6ZSC3 357 aaKnown RBP10.23□□□□□ -0.77
EXD1-204ENST00000558881 CCDC144CPQ8IYA2 1237 aa10.23□□□□□ -0.77
EXD1-204ENST00000558881 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.23□□□□□ -0.77
EXD1-204ENST00000558881 UBXN6Q9BZV1 441 aa10.23□□□□□ -0.77
EXD1-204ENST00000558881 BRMS1Q9HCU9 246 aa10.23□□□□□ -0.77
EXD1-204ENST00000558881 CLIP2Q9UDT6 1046 aa10.23□□□□□ -0.77
EXD1-204ENST00000558881 CYP46A1Q9Y6A2 500 aa10.23□□□□□ -0.77
EXD1-204ENST00000558881 NUP98P52948 1817 aa10.23□□□□□ -0.77
EXD1-204ENST00000558881 USP27XA6NNY8 438 aa10.22□□□□□ -0.77
EXD1-204ENST00000558881 SNAP23O00161 211 aa10.22□□□□□ -0.77
EXD1-204ENST00000558881 PARP10Q53GL7 1025 aa10.22□□□□□ -0.77
EXD1-204ENST00000558881 USPL1Q5W0Q7 1092 aa10.22□□□□□ -0.77
EXD1-204ENST00000558881 NEK11Q8NG66 645 aa10.22□□□□□ -0.77
EXD1-204ENST00000558881 GJD4Q96KN9 370 aaPredicted RBP10.22□□□□□ -0.77
EXD1-204ENST00000558881 LIMCH1Q9UPQ0 1083 aa10.22□□□□□ -0.77
EXD1-204ENST00000558881 MYH14Q7Z406 1995 aaKnown RBP10.22□□□□□ -0.77
EXD1-204ENST00000558881 RFX7Q2KHR2 1363 aa10.22□□□□□ -0.77
EXD1-204ENST00000558881 ATP8B1O43520 1251 aa10.22□□□□□ -0.77
EXD1-204ENST00000558881 PDE8BO95263 885 aa10.22□□□□□ -0.77
EXD1-204ENST00000558881 CAVIN2O95810 425 aa10.22□□□□□ -0.77
EXD1-204ENST00000558881 GTF2A1P52655 376 aaPredicted RBP10.22□□□□□ -0.77
EXD1-204ENST00000558881 GPS2Q13227 327 aa10.22□□□□□ -0.77
EXD1-204ENST00000558881 ANO6Q4KMQ2 910 aa10.22□□□□□ -0.77
EXD1-204ENST00000558881 ZMYM1Q5SVZ6 1142 aa10.22□□□□□ -0.77
EXD1-204ENST00000558881 VPS53Q5VIR6 699 aa10.22□□□□□ -0.77
EXD1-204ENST00000558881 SARM1Q6SZW1 724 aa10.22□□□□□ -0.77
EXD1-204ENST00000558881 KRBA2Q6ZNG9 492 aa10.22□□□□□ -0.77
EXD1-204ENST00000558881 TCEANC2Q96MN5 208 aa10.22□□□□□ -0.77
EXD1-204ENST00000558881 CWC15Q9P013 229 aaKnown RBP10.22□□□□□ -0.77
EXD1-204ENST00000558881 RNF113AO15541 343 aaKnown RBP10.21□□□□□ -0.77
EXD1-204ENST00000558881 GALR2O43603 387 aaPredicted RBP10.21□□□□□ -0.77
EXD1-204ENST00000558881 DNM1Q05193 864 aaKnown RBP10.21□□□□□ -0.77
EXD1-204ENST00000558881 ZSCAN26Q16670 478 aa10.21□□□□□ -0.77
EXD1-204ENST00000558881 BICDL1Q6ZP65 573 aa10.21□□□□□ -0.77
EXD1-204ENST00000558881 PLPP6Q8IY26 295 aa10.21□□□□□ -0.77
EXD1-204ENST00000558881 CCAR2Q8N163 923 aaKnown RBP10.21□□□□□ -0.77
EXD1-204ENST00000558881 HELLSQ9NRZ9 838 aa10.21□□□□□ -0.77
EXD1-204ENST00000558881 AFF2P51816 1311 aa10.21□□□□□ -0.78
EXD1-204ENST00000558881 A0A0G2JLW4 131 aa10.21□□□□□ -0.78
EXD1-204ENST00000558881 GRXCR2A6NFK2 248 aa10.21□□□□□ -0.78
EXD1-204ENST00000558881 M0R2C6 588 aa10.21□□□□□ -0.78
EXD1-204ENST00000558881 MCAMP43121 646 aa10.21□□□□□ -0.78
EXD1-204ENST00000558881 ERCC6LQ2NKX8 1250 aa10.21□□□□□ -0.78
EXD1-204ENST00000558881 AMIGO3Q86WK7 504 aa10.21□□□□□ -0.78
EXD1-204ENST00000558881 OSBP2Q969R2 916 aa10.21□□□□□ -0.78
EXD1-204ENST00000558881 MRFAP1L1Q96HT8 127 aa10.21□□□□□ -0.78
EXD1-204ENST00000558881 MTMR6Q9Y217 621 aa10.21□□□□□ -0.78
EXD1-204ENST00000558881 ANKRD36CQ5JPF3 1778 aa10.2□□□□□ -0.78
EXD1-204ENST00000558881 RREB1Q92766 1687 aa10.2□□□□□ -0.78
EXD1-204ENST00000558881 CYP21A2P08686 494 aa10.2□□□□□ -0.78
EXD1-204ENST00000558881 SKILP12757 684 aa10.2□□□□□ -0.78
EXD1-204ENST00000558881 TSGA10IPQ3SY00 556 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms