RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 PBX4Q9BYU1 374 aa8.81□□□□□ -1
LRRC28-209ENST00000558861 ABCB6Q9NP58 842 aa8.81□□□□□ -1
LRRC28-209ENST00000558861 ERVK-7P63135 1459 aa8.81□□□□□ -1
LRRC28-209ENST00000558861 PLA2R1Q13018 1463 aa8.81□□□□□ -1
LRRC28-209ENST00000558861 PTPRTO14522 1441 aa8.8□□□□□ -1
LRRC28-209ENST00000558861 CAMSAP1Q5T5Y3 1602 aa8.8□□□□□ -1
LRRC28-209ENST00000558861 GIPC1O14908 333 aa8.8□□□□□ -1
LRRC28-209ENST00000558861 USP17L7P0C7H9 530 aa8.8□□□□□ -1
LRRC28-209ENST00000558861 PSAPL1Q6NUJ1 521 aa8.8□□□□□ -1
LRRC28-209ENST00000558861 PRPF40BQ6NWY9 871 aaKnown RBP8.8□□□□□ -1
LRRC28-209ENST00000558861 ADAMTSL4Q6UY14 1074 aa8.8□□□□□ -1
LRRC28-209ENST00000558861 CRELD1Q96HD1 420 aa8.8□□□□□ -1
LRRC28-209ENST00000558861 LPIN3Q9BQK8 851 aa8.8□□□□□ -1
LRRC28-209ENST00000558861 SMG9Q9H0W8 520 aaKnown RBP8.8□□□□□ -1
LRRC28-209ENST00000558861 RBSNQ9H1K0 784 aa8.8□□□□□ -1
LRRC28-209ENST00000558861 FAM8A1Q9UBU6 413 aa8.8□□□□□ -1
LRRC28-209ENST00000558861 TRAK1Q9UPV9 953 aa8.8□□□□□ -1
LRRC28-209ENST00000558861 KANK1Q14678 1352 aa8.8□□□□□ -1
LRRC28-209ENST00000558861 RPRD2Q5VT52 1461 aaKnown RBP8.8□□□□□ -1
LRRC28-209ENST00000558861 TET3O43151 1660 aa8.8□□□□□ -1
LRRC28-209ENST00000558861 PDE2AO00408 941 aaPredicted RBP8.79□□□□□ -1
LRRC28-209ENST00000558861 GRIA4P48058 902 aa8.79□□□□□ -1
LRRC28-209ENST00000558861 FCGRTP55899 365 aa8.79□□□□□ -1
LRRC28-209ENST00000558861 CEP135Q66GS9 1140 aa8.79□□□□□ -1
LRRC28-209ENST00000558861 ELMSAN1Q6PJG2 1045 aa8.79□□□□□ -1
LRRC28-209ENST00000558861 TMEM102Q8N9M5 508 aaPredicted RBP8.79□□□□□ -1
LRRC28-209ENST00000558861 SRCIN1Q9C0H9 1055 aa8.79□□□□□ -1
LRRC28-209ENST00000558861 BHLHE41Q9C0J9 482 aaPredicted RBP8.79□□□□□ -1
LRRC28-209ENST00000558861 STARD13Q9Y3M8 1113 aa8.79□□□□□ -1
LRRC28-209ENST00000558861 SYNMO15061 1565 aa8.78□□□□□ -1
LRRC28-209ENST00000558861 LMTK3Q96Q04 1460 aa8.78□□□□□ -1
LRRC28-209ENST00000558861 SLURP2P0DP57 97 aa8.78□□□□□ -1
LRRC28-209ENST00000558861 SPRED3Q2MJR0 410 aa8.78□□□□□ -1
LRRC28-209ENST00000558861 MEI1Q5TIA1 1274 aa8.78□□□□□ -1
LRRC28-209ENST00000558861 C3orf58Q8NDZ4 430 aa8.78□□□□□ -1
LRRC28-209ENST00000558861 NUDT8Q8WV74 236 aa8.78□□□□□ -1
LRRC28-209ENST00000558861 NXPE3Q969Y0 559 aa8.78□□□□□ -1
LRRC28-209ENST00000558861 POP1Q99575 1024 aaKnown RBP8.78□□□□□ -1
LRRC28-209ENST00000558861 IGSF5Q9NSI5 407 aa8.78□□□□□ -1
LRRC28-209ENST00000558861 TRIM33Q9UPN9 1127 aa8.78□□□□□ -1
LRRC28-209ENST00000558861 E9PCH4 1651 aa8.78□□□□□ -1
LRRC28-209ENST00000558861 SETD1BQ9UPS6 1966 aaKnown RBP8.77□□□□□ -1
LRRC28-209ENST00000558861 TNRQ92752 1358 aa8.77□□□□□ -1.01
LRRC28-209ENST00000558861 TMEM238LA0A1B0GVL6 79 aa8.77□□□□□ -1.01
LRRC28-209ENST00000558861 SHISA8B8ZZ34 492 aa8.77□□□□□ -1.01
LRRC28-209ENST00000558861 SMNDC1O75940 238 aaKnown RBP eCLIP8.77□□□□□ -1.01
LRRC28-209ENST00000558861 ALBP02768 609 aa8.77□□□□□ -1.01
LRRC28-209ENST00000558861 ALAS2P22557 587 aa8.77□□□□□ -1.01
LRRC28-209ENST00000558861 MICALL1Q8N3F8 863 aa8.77□□□□□ -1.01
LRRC28-209ENST00000558861 TMEM87AQ8NBN3 555 aa8.77□□□□□ -1.01
LRRC28-209ENST00000558861 GALNT6Q8NCL4 622 aa8.77□□□□□ -1.01
LRRC28-209ENST00000558861 ASAP3Q8TDY4 903 aa8.77□□□□□ -1.01
LRRC28-209ENST00000558861 PREX1Q8TCU6 1659 aa8.76□□□□□ -1.01
LRRC28-209ENST00000558861 OIP5O43482 229 aa8.76□□□□□ -1.01
LRRC28-209ENST00000558861 TCF3P15923 654 aa8.76□□□□□ -1.01
LRRC28-209ENST00000558861 GSTT1P30711 240 aa8.76□□□□□ -1.01
LRRC28-209ENST00000558861 WHAMMQ8TF30 809 aa8.76□□□□□ -1.01
LRRC28-209ENST00000558861 EDARADDQ8WWZ3 215 aa8.76□□□□□ -1.01
LRRC28-209ENST00000558861 MPHOSPH9Q99550 1183 aa8.76□□□□□ -1.01
LRRC28-209ENST00000558861 FRRS1LQ9P0K9 344 aa8.76□□□□□ -1.01
LRRC28-209ENST00000558861 BCRP11274 1271 aa8.75□□□□□ -1.01
LRRC28-209ENST00000558861 GDF6Q6KF10 455 aaPredicted RBP8.75□□□□□ -1.01
LRRC28-209ENST00000558861 LYPD4Q6UWN0 246 aa8.75□□□□□ -1.01
LRRC28-209ENST00000558861 TREML4Q6UXN2 200 aa8.75□□□□□ -1.01
LRRC28-209ENST00000558861 DTHD1Q6ZMT9 781 aa8.75□□□□□ -1.01
LRRC28-209ENST00000558861 LACRTQ9GZZ8 138 aa8.75□□□□□ -1.01
LRRC28-209ENST00000558861 JPH1Q9HDC5 661 aaPredicted RBP8.75□□□□□ -1.01
LRRC28-209ENST00000558861 PIK3C2BO00750 1634 aa8.75□□□□□ -1.01
LRRC28-209ENST00000558861 NLRP1Q9C000 1473 aa8.75□□□□□ -1.01
LRRC28-209ENST00000558861 MYO3AQ8NEV4 1616 aa8.74□□□□□ -1.01
LRRC28-209ENST00000558861 A0A096LPE4 126 aa8.74□□□□□ -1.01
LRRC28-209ENST00000558861 A0A1W2PPZ6 126 aa8.74□□□□□ -1.01
LRRC28-209ENST00000558861 SCAMP3O14828 347 aaKnown RBP8.74□□□□□ -1.01
LRRC28-209ENST00000558861 RGS9O75916 674 aaPredicted RBP8.74□□□□□ -1.01
LRRC28-209ENST00000558861 CELA2BP08218 269 aaPredicted RBP8.74□□□□□ -1.01
LRRC28-209ENST00000558861 IDI1Q13907 227 aa8.74□□□□□ -1.01
LRRC28-209ENST00000558861 LCE2AQ5TA79 106 aaPredicted RBP8.74□□□□□ -1.01
LRRC28-209ENST00000558861 C20orf204Q6ZNR8 217 aa8.74□□□□□ -1.01
LRRC28-209ENST00000558861 C8orf86Q6ZUL3 223 aa8.74□□□□□ -1.01
LRRC28-209ENST00000558861 CHSY3Q70JA7 882 aa8.74□□□□□ -1.01
LRRC28-209ENST00000558861 MUC3BQ9H195 1237 aa8.74□□□□□ -1.01
LRRC28-209ENST00000558861 PPP4R2Q9NY27 417 aa8.74□□□□□ -1.01
LRRC28-209ENST00000558861 A2ML1A8K2U0 1454 aa8.74□□□□□ -1.01
LRRC28-209ENST00000558861 TRPM2O94759 1503 aa8.74□□□□□ -1.01
LRRC28-209ENST00000558861 ANKRD30BQ9BXX2 1392 aa8.73□□□□□ -1.01
LRRC28-209ENST00000558861 UGGT1Q9NYU2 1555 aa8.73□□□□□ -1.01
LRRC28-209ENST00000558861 ZNF142P52746 1687 aaPredicted RBP8.73□□□□□ -1.01
LRRC28-209ENST00000558861 FBXO24O75426 580 aa8.73□□□□□ -1.01
LRRC28-209ENST00000558861 ITPKAP23677 461 aa8.73□□□□□ -1.01
LRRC28-209ENST00000558861 TTF2Q9UNY4 1162 aaKnown RBP8.73□□□□□ -1.01
LRRC28-209ENST00000558861 AKAP2Q9Y2D5 859 aa8.73□□□□□ -1.01
LRRC28-209ENST00000558861 CEP170BQ9Y4F5 1589 aaPredicted RBP8.73□□□□□ -1.01
LRRC28-209ENST00000558861 UHRF1BP1Q6BDS2 1440 aa8.72□□□□□ -1.01
LRRC28-209ENST00000558861 M0R082 166 aa8.72□□□□□ -1.01
LRRC28-209ENST00000558861 PTPRAP18433 802 aa8.72□□□□□ -1.01
LRRC28-209ENST00000558861 HDLBPQ00341 1268 aaKnown RBP8.72□□□□□ -1.01
LRRC28-209ENST00000558861 FANCCQ00597 558 aa8.72□□□□□ -1.01
LRRC28-209ENST00000558861 GRIK5Q16478 980 aa8.72□□□□□ -1.01
LRRC28-209ENST00000558861 C9orf131Q5VYM1 1079 aa8.72□□□□□ -1.01
LRRC28-209ENST00000558861 ZNF417Q8TAU3 575 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms