RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 FAM155AB1AL88 458 aaPredicted RBP12.58□□□□□ -0.4
SPG11-212ENST00000558790 PSMD14O00487 310 aa12.58□□□□□ -0.4
SPG11-212ENST00000558790 S1PR4O95977 384 aa12.58□□□□□ -0.4
SPG11-212ENST00000558790 DESI1Q6ICB0 168 aa12.58□□□□□ -0.4
SPG11-212ENST00000558790 CCDC146Q8IYE0 955 aa12.58□□□□□ -0.4
SPG11-212ENST00000558790 CELF1Q92879 486 aaKnown RBP12.58□□□□□ -0.4
SPG11-212ENST00000558790 RNF186Q9NXI6 227 aa12.58□□□□□ -0.4
SPG11-212ENST00000558790 H7C1D1 291 aa12.57□□□□□ -0.4
SPG11-212ENST00000558790 CHL1O00533 1208 aa12.57□□□□□ -0.4
SPG11-212ENST00000558790 DXOO77932 396 aaKnown RBP12.57□□□□□ -0.4
SPG11-212ENST00000558790 HUNKP57058 714 aa12.57□□□□□ -0.4
SPG11-212ENST00000558790 WASHC4Q2M389 1173 aa12.57□□□□□ -0.4
SPG11-212ENST00000558790 TBC1D10BQ4KMP7 808 aaPredicted RBP12.57□□□□□ -0.4
SPG11-212ENST00000558790 HDGFL1Q5TGJ6 251 aa12.57□□□□□ -0.4
SPG11-212ENST00000558790 LYPD8Q6UX82 237 aa12.57□□□□□ -0.4
SPG11-212ENST00000558790 USP48Q86UV5 1035 aa12.57□□□□□ -0.4
SPG11-212ENST00000558790 PLBD2Q8NHP8 589 aa12.57□□□□□ -0.4
SPG11-212ENST00000558790 FAM89AQ96GI7 184 aa12.57□□□□□ -0.4
SPG11-212ENST00000558790 ISCA1Q9BUE6 129 aa12.57□□□□□ -0.4
SPG11-212ENST00000558790 ADM5C9JUS6 153 aa12.56□□□□□ -0.4
SPG11-212ENST00000558790 ATP5J2-PTCD1G3V325 749 aa12.56□□□□□ -0.4
SPG11-212ENST00000558790 ECE2O60344 883 aa12.56□□□□□ -0.4
SPG11-212ENST00000558790 GPSM2P81274 684 aa12.56□□□□□ -0.4
SPG11-212ENST00000558790 NOGQ13253 232 aa12.56□□□□□ -0.4
SPG11-212ENST00000558790 DPF2Q92785 391 aa12.56□□□□□ -0.4
SPG11-212ENST00000558790 POLLQ9UGP5 575 aa12.56□□□□□ -0.4
SPG11-212ENST00000558790 NSFL1CQ9UNZ2 370 aaKnown RBP12.56□□□□□ -0.4
SPG11-212ENST00000558790 LAS1LQ9Y4W2 734 aaKnown RBP12.56□□□□□ -0.4
SPG11-212ENST00000558790 A0A1B0GUL6 1792 aa12.56□□□□□ -0.4
SPG11-212ENST00000558790 KIAA0100Q14667 2235 aaKnown RBP12.56□□□□□ -0.4
SPG11-212ENST00000558790 MMP16P51512 607 aa12.55□□□□□ -0.4
SPG11-212ENST00000558790 KIF23Q02241 960 aaPredicted RBP12.55□□□□□ -0.4
SPG11-212ENST00000558790 RALBP1Q15311 655 aa12.55□□□□□ -0.4
SPG11-212ENST00000558790 SF3B3Q15393 1217 aaKnown RBP12.55□□□□□ -0.4
SPG11-212ENST00000558790 KRT26Q7Z3Y9 468 aa12.55□□□□□ -0.4
SPG11-212ENST00000558790 EPS8L1Q8TE68 723 aa12.55□□□□□ -0.4
SPG11-212ENST00000558790 POM121Q96HA1 1249 aa12.55□□□□□ -0.4
SPG11-212ENST00000558790 KCNQ5Q9NR82 932 aa12.55□□□□□ -0.4
SPG11-212ENST00000558790 ZNF609O15014 1411 aa12.54□□□□□ -0.4
SPG11-212ENST00000558790 ECM29Q5VYK3 1845 aa12.54□□□□□ -0.4
SPG11-212ENST00000558790 HOXB7P09629 217 aa12.54□□□□□ -0.4
SPG11-212ENST00000558790 RPS12P25398 132 aaKnown RBP12.54□□□□□ -0.4
SPG11-212ENST00000558790 CLUAP1Q96AJ1 413 aa12.54□□□□□ -0.4
SPG11-212ENST00000558790 GBA2Q9HCG7 927 aaPredicted RBP12.54□□□□□ -0.4
SPG11-212ENST00000558790 SAGE1Q9NXZ1 904 aa12.54□□□□□ -0.4
SPG11-212ENST00000558790 DBF4Q9UBU7 674 aaPredicted RBP12.54□□□□□ -0.4
SPG11-212ENST00000558790 IRS4O14654 1257 aaPredicted RBP12.53□□□□□ -0.4
SPG11-212ENST00000558790 PTPRNQ16849 979 aa12.53□□□□□ -0.4
SPG11-212ENST00000558790 KIF4BQ2VIQ3 1234 aa12.53□□□□□ -0.4
SPG11-212ENST00000558790 RGMBQ6NW40 437 aa12.53□□□□□ -0.4
SPG11-212ENST00000558790 TBC1D16Q8TBP0 767 aa12.53□□□□□ -0.4
SPG11-212ENST00000558790 GGA3Q9NZ52 723 aa12.53□□□□□ -0.4
SPG11-212ENST00000558790 MAP10Q9P2G4 905 aa12.53□□□□□ -0.4
SPG11-212ENST00000558790 ASTN2O75129 1339 aaPredicted RBP12.53□□□□□ -0.4
SPG11-212ENST00000558790 MYBBP1AQ9BQG0 1328 aaKnown RBP12.53□□□□□ -0.4
SPG11-212ENST00000558790 LAMB1P07942 1786 aa12.53□□□□□ -0.4
SPG11-212ENST00000558790 RBBP6Q7Z6E9 1792 aaKnown RBP12.53□□□□□ -0.4
SPG11-212ENST00000558790 NR6A1Q15406 480 aa12.52□□□□□ -0.41
SPG11-212ENST00000558790 SLC17A8Q8NDX2 589 aa12.52□□□□□ -0.41
SPG11-212ENST00000558790 RUNDC1Q96C34 613 aa12.52□□□□□ -0.41
SPG11-212ENST00000558790 DCPSQ96C86 337 aaKnown RBP12.52□□□□□ -0.41
SPG11-212ENST00000558790 EYA3Q99504 573 aa12.52□□□□□ -0.41
SPG11-212ENST00000558790 NUDT12Q9BQG2 462 aa12.52□□□□□ -0.41
SPG11-212ENST00000558790 TRIM34Q9BYJ4 488 aa12.52□□□□□ -0.41
SPG11-212ENST00000558790 HYPKQ9NX55 129 aa12.52□□□□□ -0.41
SPG11-212ENST00000558790 CACNA1FO60840 1977 aa12.51□□□□□ -0.41
SPG11-212ENST00000558790 UFL1O94874 794 aa12.51□□□□□ -0.41
SPG11-212ENST00000558790 DUSP27Q5VZP5 1158 aa12.51□□□□□ -0.41
SPG11-212ENST00000558790 C2orf69Q8N8R5 385 aa12.51□□□□□ -0.41
SPG11-212ENST00000558790 CSRNP1Q96S65 589 aa12.51□□□□□ -0.41
SPG11-212ENST00000558790 SEC31BQ9NQW1 1179 aa12.51□□□□□ -0.41
SPG11-212ENST00000558790 MBIPQ9NS73 344 aa12.51□□□□□ -0.41
SPG11-212ENST00000558790 LAMA3Q16787 3333 aa12.5□□□□□ -0.41
SPG11-212ENST00000558790 VIL1P09327 827 aaKnown RBP12.5□□□□□ -0.41
SPG11-212ENST00000558790 CCNYL3P0C7X3 344 aa12.5□□□□□ -0.41
SPG11-212ENST00000558790 CTHP32929 405 aa12.5□□□□□ -0.41
SPG11-212ENST00000558790 ZNF157P51786 506 aaPredicted RBP12.5□□□□□ -0.41
SPG11-212ENST00000558790 RPS8P62241 208 aaKnown RBP12.5□□□□□ -0.41
SPG11-212ENST00000558790 TRIM28Q13263 835 aaKnown RBP12.5□□□□□ -0.41
SPG11-212ENST00000558790 WDR43Q15061 677 aaKnown RBP eCLIP12.5□□□□□ -0.41
SPG11-212ENST00000558790 ZBTB38Q8NAP3 1195 aaPredicted RBP12.5□□□□□ -0.41
SPG11-212ENST00000558790 CDCA5Q96FF9 252 aa12.5□□□□□ -0.41
SPG11-212ENST00000558790 PODXL2Q9NZ53 605 aa12.5□□□□□ -0.41
SPG11-212ENST00000558790 FCF1Q9Y324 198 aaKnown RBP12.5□□□□□ -0.41
SPG11-212ENST00000558790 F12P00748 615 aaPredicted RBP12.49□□□□□ -0.41
SPG11-212ENST00000558790 ZC3H12CQ9C0D7 883 aaKnown RBP12.49□□□□□ -0.41
SPG11-212ENST00000558790 GDPD2Q9HCC8 539 aa12.49□□□□□ -0.41
SPG11-212ENST00000558790 ANKIB1Q9P2G1 1089 aa12.49□□□□□ -0.41
SPG11-212ENST00000558790 COG6Q9Y2V7 657 aa12.49□□□□□ -0.41
SPG11-212ENST00000558790 ZNF280AP59817 542 aaPredicted RBP12.48□□□□□ -0.41
SPG11-212ENST00000558790 ANGEL2Q5VTE6 544 aaKnown RBP12.48□□□□□ -0.41
SPG11-212ENST00000558790 RASAL3Q86YV0 1011 aa12.48□□□□□ -0.41
SPG11-212ENST00000558790 CCDC85AQ96PX6 553 aaPredicted RBP12.48□□□□□ -0.41
SPG11-212ENST00000558790 MYD88Q99836 296 aa12.48□□□□□ -0.41
SPG11-212ENST00000558790 PHAXQ9H814 394 aaKnown RBP12.48□□□□□ -0.41
SPG11-212ENST00000558790 GGA1Q9UJY5 639 aa12.48□□□□□ -0.41
SPG11-212ENST00000558790 ADAMTS8Q9UP79 889 aa12.48□□□□□ -0.41
SPG11-212ENST00000558790 VCANP13611 3396 aa12.48□□□□□ -0.41
SPG11-212ENST00000558790 ZNF853P0CG23 659 aa12.47□□□□□ -0.41
SPG11-212ENST00000558790 CCDC152Q4G0S7 254 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms