RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 OPTNQ96CV9 577 aa14.34□□□□□ -0.11
CASC4-205ENST00000558735 OTUD5Q96G74 571 aa14.34□□□□□ -0.11
CASC4-205ENST00000558735 ELP3Q9H9T3 547 aa14.34□□□□□ -0.11
CASC4-205ENST00000558735 CEP290O15078 2479 aa14.34□□□□□ -0.11
CASC4-205ENST00000558735 GNAI3P08754 354 aa14.33□□□□□ -0.12
CASC4-205ENST00000558735 PHKA1P46020 1223 aa14.33□□□□□ -0.12
CASC4-205ENST00000558735 TIMM10P62072 90 aa14.33□□□□□ -0.12
CASC4-205ENST00000558735 SLC9C1Q4G0N8 1177 aa14.33□□□□□ -0.12
CASC4-205ENST00000558735 FAM83AQ86UY5 434 aa14.33□□□□□ -0.12
CASC4-205ENST00000558735 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.33□□□□□ -0.12
CASC4-205ENST00000558735 ZFYVE28Q9HCC9 887 aa14.33□□□□□ -0.12
CASC4-205ENST00000558735 ZCCHC17Q9NP64 241 aaKnown RBP14.33□□□□□ -0.12
CASC4-205ENST00000558735 PTCH2Q9Y6C5 1203 aa14.33□□□□□ -0.12
CASC4-205ENST00000558735 A0A0C4DFX4 3053 aa14.32□□□□□ -0.12
CASC4-205ENST00000558735 IPO8O15397 1037 aaKnown RBP14.32□□□□□ -0.12
CASC4-205ENST00000558735 GNRH1P01148 92 aa14.32□□□□□ -0.12
CASC4-205ENST00000558735 TRIM27P14373 513 aa14.32□□□□□ -0.12
CASC4-205ENST00000558735 PRDX5P30044 214 aa14.32□□□□□ -0.12
CASC4-205ENST00000558735 ADORA1P30542 326 aa14.32□□□□□ -0.12
CASC4-205ENST00000558735 GTF2A2P52657 109 aa14.32□□□□□ -0.12
CASC4-205ENST00000558735 MTX1Q13505 466 aa14.32□□□□□ -0.12
CASC4-205ENST00000558735 VGLL4Q14135 290 aa14.32□□□□□ -0.12
CASC4-205ENST00000558735 DIXDC1Q155Q3 683 aa14.32□□□□□ -0.12
CASC4-205ENST00000558735 MIER1Q8N108 512 aa14.32□□□□□ -0.12
CASC4-205ENST00000558735 GNL3LQ9NVN8 582 aaKnown RBP14.32□□□□□ -0.12
CASC4-205ENST00000558735 DAGLAQ9Y4D2 1042 aa14.32□□□□□ -0.12
CASC4-205ENST00000558735 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.32□□□□□ -0.12
CASC4-205ENST00000558735 MAST3O60307 1309 aa14.32□□□□□ -0.12
CASC4-205ENST00000558735 H0YGN5 161 aa14.31□□□□□ -0.12
CASC4-205ENST00000558735 ZBTB22O15209 634 aa14.31□□□□□ -0.12
CASC4-205ENST00000558735 SRGAP3O43295 1099 aa14.31□□□□□ -0.12
CASC4-205ENST00000558735 TAF1CQ15572 869 aaPredicted RBP14.31□□□□□ -0.12
CASC4-205ENST00000558735 CCDC102BQ68D86 513 aa14.31□□□□□ -0.12
CASC4-205ENST00000558735 CDC42EP5Q6NZY7 148 aa14.31□□□□□ -0.12
CASC4-205ENST00000558735 ATF7IPQ6VMQ6 1270 aa14.31□□□□□ -0.12
CASC4-205ENST00000558735 FRAT1Q92837 279 aaPredicted RBP14.31□□□□□ -0.12
CASC4-205ENST00000558735 TMOD2Q9NZR1 351 aa14.31□□□□□ -0.12
CASC4-205ENST00000558735 DENND2AQ9ULE3 1009 aa14.31□□□□□ -0.12
CASC4-205ENST00000558735 TRIOBPQ9H2D6 2365 aa14.31□□□□□ -0.12
CASC4-205ENST00000558735 CCL15-CCL14A0A0B4J2E2 113 aa14.3□□□□□ -0.12
CASC4-205ENST00000558735 SEMA3EO15041 775 aa14.3□□□□□ -0.12
CASC4-205ENST00000558735 TLR2O60603 784 aa14.3□□□□□ -0.12
CASC4-205ENST00000558735 LDHBP07195 334 aaKnown RBP14.3□□□□□ -0.12
CASC4-205ENST00000558735 PRMT2P55345 433 aa14.3□□□□□ -0.12
CASC4-205ENST00000558735 TFCP2Q12800 502 aa14.3□□□□□ -0.12
CASC4-205ENST00000558735 CCL15Q16663 113 aa14.3□□□□□ -0.12
CASC4-205ENST00000558735 MIGA2Q7L4E1 593 aa14.3□□□□□ -0.12
CASC4-205ENST00000558735 FAM151AQ8WW52 585 aa14.3□□□□□ -0.12
CASC4-205ENST00000558735 ZKSCAN4Q969J2 545 aaPredicted RBP14.3□□□□□ -0.12
CASC4-205ENST00000558735 CLUAP1Q96AJ1 413 aa14.3□□□□□ -0.12
CASC4-205ENST00000558735 OTOFQ9HC10 1997 aa14.3□□□□□ -0.12
CASC4-205ENST00000558735 SALL1Q9NSC2 1324 aa14.3□□□□□ -0.12
CASC4-205ENST00000558735 TCP10Q12799 353 aa14.29□□□□□ -0.12
CASC4-205ENST00000558735 SLC4A8Q2Y0W8 1093 aa14.29□□□□□ -0.12
CASC4-205ENST00000558735 FAM43AQ8N2R8 423 aa14.29□□□□□ -0.12
CASC4-205ENST00000558735 XAGE2Q96GT9 111 aa14.29□□□□□ -0.12
CASC4-205ENST00000558735 USP40Q9NVE5 1235 aa14.29□□□□□ -0.12
CASC4-205ENST00000558735 CSADQ9Y600 493 aa14.29□□□□□ -0.12
CASC4-205ENST00000558735 PNMA6EA0A0J9YXQ4 647 aa14.28□□□□□ -0.12
CASC4-205ENST00000558735 A0A1B0GUL7 405 aa14.28□□□□□ -0.12
CASC4-205ENST00000558735 SPDYE5A6NIY4 337 aa14.28□□□□□ -0.12
CASC4-205ENST00000558735 WDHD1O75717 1129 aaPredicted RBP14.28□□□□□ -0.12
CASC4-205ENST00000558735 GNAI2P04899 355 aa14.28□□□□□ -0.12
CASC4-205ENST00000558735 LACTBP83111 547 aaPredicted RBP14.28□□□□□ -0.12
CASC4-205ENST00000558735 NFIAQ12857 509 aa14.28□□□□□ -0.12
CASC4-205ENST00000558735 ZFPM1Q8IX07 1006 aa14.28□□□□□ -0.12
CASC4-205ENST00000558735 HOOK2Q96ED9 719 aa14.28□□□□□ -0.12
CASC4-205ENST00000558735 WRNIP1Q96S55 665 aa14.28□□□□□ -0.12
CASC4-205ENST00000558735 FAM198AQ9UFP1 575 aa14.28□□□□□ -0.12
CASC4-205ENST00000558735 AKAP2Q9Y2D5 859 aa14.28□□□□□ -0.12
CASC4-205ENST00000558735 SNCAIPQ9Y6H5 919 aa14.28□□□□□ -0.12
CASC4-205ENST00000558735 ARAP2Q8WZ64 1704 aa14.27□□□□□ -0.12
CASC4-205ENST00000558735 CETPP11597 493 aa14.27□□□□□ -0.13
CASC4-205ENST00000558735 RASGRF1Q13972 1273 aa14.27□□□□□ -0.13
CASC4-205ENST00000558735 UBE2Q1Q7Z7E8 422 aa14.27□□□□□ -0.13
CASC4-205ENST00000558735 ERO1BQ86YB8 467 aa14.27□□□□□ -0.13
CASC4-205ENST00000558735 TMEM57Q8N5G2 664 aa14.27□□□□□ -0.13
CASC4-205ENST00000558735 ZNF112Q9UJU3 913 aa14.27□□□□□ -0.13
CASC4-205ENST00000558735 IRF6O14896 467 aa14.26□□□□□ -0.13
CASC4-205ENST00000558735 INPP5BP32019 993 aa14.26□□□□□ -0.13
CASC4-205ENST00000558735 HNRNPUQ00839 825 aaKnown RBP eCLIP14.26□□□□□ -0.13
CASC4-205ENST00000558735 KIF22Q14807 665 aa14.26□□□□□ -0.13
CASC4-205ENST00000558735 DCAF15Q66K64 600 aa14.26□□□□□ -0.13
CASC4-205ENST00000558735 SH3TC2Q8TF17 1288 aa14.26□□□□□ -0.13
CASC4-205ENST00000558735 FAM163AQ96GL9 167 aaPredicted RBP14.26□□□□□ -0.13
CASC4-205ENST00000558735 NEUROD6Q96NK8 337 aa14.26□□□□□ -0.13
CASC4-205ENST00000558735 ZNF341Q9BYN7 854 aa14.26□□□□□ -0.13
CASC4-205ENST00000558735 PRO3102Q9H379 93 aa14.26□□□□□ -0.13
CASC4-205ENST00000558735 COL6A3P12111 3177 aa14.25□□□□□ -0.13
CASC4-205ENST00000558735 BTBD19C9JJ37 291 aa14.25□□□□□ -0.13
CASC4-205ENST00000558735 ZKSCAN2Q63HK3 967 aa14.25□□□□□ -0.13
CASC4-205ENST00000558735 DIEXFQ68CQ4 756 aaKnown RBP14.25□□□□□ -0.13
CASC4-205ENST00000558735 C17orf99Q6UX52 265 aa14.25□□□□□ -0.13
CASC4-205ENST00000558735 ZGPATQ8N5A5 531 aaKnown RBP14.25□□□□□ -0.13
CASC4-205ENST00000558735 SHISA4Q96DD7 197 aa14.25□□□□□ -0.13
CASC4-205ENST00000558735 ARHGAP39Q9C0H5 1083 aa14.25□□□□□ -0.13
CASC4-205ENST00000558735 ABCF2Q9UG63 623 aa14.25□□□□□ -0.13
CASC4-205ENST00000558735 RPAP1Q9BWH6 1393 aaPredicted RBP14.24□□□□□ -0.13
CASC4-205ENST00000558735 GAKO14976 1311 aa14.24□□□□□ -0.13
CASC4-205ENST00000558735 PDS5AQ29RF7 1337 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms