RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 CTAGE4Q8IX94 777 aa12.81□□□□□ -0.36
PCAT29-201ENST00000558411 SUGCTQ9HAC7 445 aa12.81□□□□□ -0.36
PCAT29-201ENST00000558411 ZNF609O15014 1411 aa12.81□□□□□ -0.36
PCAT29-201ENST00000558411 UTYO14607 1347 aa12.81□□□□□ -0.36
PCAT29-201ENST00000558411 LRRIQ3A6PVS8 624 aaPredicted RBP12.8□□□□□ -0.36
PCAT29-201ENST00000558411 FDPSP14324 419 aaKnown RBP12.8□□□□□ -0.36
PCAT29-201ENST00000558411 MAP9Q49MG5 647 aa12.8□□□□□ -0.36
PCAT29-201ENST00000558411 SYNE3Q6ZMZ3 975 aa12.8□□□□□ -0.36
PCAT29-201ENST00000558411 TICAM2Q86XR7 235 aa12.8□□□□□ -0.36
PCAT29-201ENST00000558411 SEC62Q99442 399 aaKnown RBP12.8□□□□□ -0.36
PCAT29-201ENST00000558411 LRRC2Q9BYS8 371 aa12.8□□□□□ -0.36
PCAT29-201ENST00000558411 TLR7Q9NYK1 1049 aaKnown RBP12.8□□□□□ -0.36
PCAT29-201ENST00000558411 CHPF2Q9P2E5 772 aa12.8□□□□□ -0.36
PCAT29-201ENST00000558411 MYO1AQ9UBC5 1043 aa12.8□□□□□ -0.36
PCAT29-201ENST00000558411 ADGRG1Q9Y653 693 aa12.8□□□□□ -0.36
PCAT29-201ENST00000558411 PTPRUQ92729 1446 aa12.8□□□□□ -0.36
PCAT29-201ENST00000558411 ATXN2Q99700 1313 aaKnown RBP12.8□□□□□ -0.36
PCAT29-201ENST00000558411 ANKARQ7Z5J8 1434 aa12.8□□□□□ -0.36
PCAT29-201ENST00000558411 EXOC5O00471 708 aa12.8□□□□□ -0.36
PCAT29-201ENST00000558411 PPP6R2O75170 966 aa12.8□□□□□ -0.36
PCAT29-201ENST00000558411 SYF2O95926 243 aaKnown RBP12.8□□□□□ -0.36
PCAT29-201ENST00000558411 ZNF18P17022 549 aa12.8□□□□□ -0.36
PCAT29-201ENST00000558411 ADKP55263 362 aaKnown RBP12.8□□□□□ -0.36
PCAT29-201ENST00000558411 CCT2P78371 535 aaKnown RBP12.8□□□□□ -0.36
PCAT29-201ENST00000558411 SLC39A14Q15043 492 aa12.8□□□□□ -0.36
PCAT29-201ENST00000558411 JMYQ8N9B5 988 aa12.8□□□□□ -0.36
PCAT29-201ENST00000558411 ANKRD24Q8TF21 1146 aa12.8□□□□□ -0.36
PCAT29-201ENST00000558411 DESI2Q9BSY9 194 aa12.8□□□□□ -0.36
PCAT29-201ENST00000558411 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.8□□□□□ -0.36
PCAT29-201ENST00000558411 MROH7-TTC4A0A0A0MT08 1334 aa12.79□□□□□ -0.36
PCAT29-201ENST00000558411 SH3TC1Q8TE82 1336 aa12.79□□□□□ -0.36
PCAT29-201ENST00000558411 AKR1B15C9JRZ8 316 aaPredicted RBP12.79□□□□□ -0.36
PCAT29-201ENST00000558411 HNRNPH1P31943 449 aaKnown RBP12.79□□□□□ -0.36
PCAT29-201ENST00000558411 EIF4A1P60842 406 aaKnown RBP12.79□□□□□ -0.36
PCAT29-201ENST00000558411 TRDNQ13061 729 aa12.79□□□□□ -0.36
PCAT29-201ENST00000558411 SF3B2Q13435 895 aaKnown RBP12.79□□□□□ -0.36
PCAT29-201ENST00000558411 KIF4BQ2VIQ3 1234 aa12.79□□□□□ -0.36
PCAT29-201ENST00000558411 WWC2Q6AWC2 1192 aa12.79□□□□□ -0.36
PCAT29-201ENST00000558411 STAG1Q8WVM7 1258 aa12.79□□□□□ -0.36
PCAT29-201ENST00000558411 C8orf76Q96K31 380 aa12.79□□□□□ -0.36
PCAT29-201ENST00000558411 RAI14Q9P0K7 980 aa12.79□□□□□ -0.36
PCAT29-201ENST00000558411 NWD1Q149M9 1564 aa12.79□□□□□ -0.36
PCAT29-201ENST00000558411 ACEP12821 1306 aa12.79□□□□□ -0.36
PCAT29-201ENST00000558411 CDHR2Q9BYE9 1310 aa12.79□□□□□ -0.36
PCAT29-201ENST00000558411 ANKRD65E5RJM6 399 aa12.79□□□□□ -0.36
PCAT29-201ENST00000558411 EBAG9O00559 213 aa12.79□□□□□ -0.36
PCAT29-201ENST00000558411 PHACTR2O75167 634 aa12.79□□□□□ -0.36
PCAT29-201ENST00000558411 RHOXF2BP0C7M4 288 aa12.79□□□□□ -0.36
PCAT29-201ENST00000558411 ISM2Q6H9L7 571 aa12.79□□□□□ -0.36
PCAT29-201ENST00000558411 RASGRP2Q7LDG7 609 aa12.79□□□□□ -0.36
PCAT29-201ENST00000558411 CNPY4Q8N129 248 aa12.79□□□□□ -0.36
PCAT29-201ENST00000558411 KAT2BQ92831 832 aa12.79□□□□□ -0.36
PCAT29-201ENST00000558411 NAPGQ99747 312 aaPredicted RBP12.79□□□□□ -0.36
PCAT29-201ENST00000558411 RHOXF2Q9BQY4 288 aa12.79□□□□□ -0.36
PCAT29-201ENST00000558411 DSCC1Q9BVC3 393 aa12.79□□□□□ -0.36
PCAT29-201ENST00000558411 NCOA5Q9HCD5 579 aaKnown RBP12.79□□□□□ -0.36
PCAT29-201ENST00000558411 DACH1Q9UI36 760 aa12.79□□□□□ -0.36
PCAT29-201ENST00000558411 TTF2Q9UNY4 1162 aaKnown RBP12.79□□□□□ -0.36
PCAT29-201ENST00000558411 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.79□□□□□ -0.36
PCAT29-201ENST00000558411 MAP3K15Q6ZN16 1313 aa12.78□□□□□ -0.36
PCAT29-201ENST00000558411 EIF2S2P20042 333 aaKnown RBP12.78□□□□□ -0.36
PCAT29-201ENST00000558411 MNAT1P51948 309 aa12.78□□□□□ -0.36
PCAT29-201ENST00000558411 ZNF569Q5MCW4 686 aa12.78□□□□□ -0.36
PCAT29-201ENST00000558411 ENOX1Q8TC92 643 aaKnown RBP12.78□□□□□ -0.36
PCAT29-201ENST00000558411 SMARCC1Q92922 1105 aaPredicted RBP12.78□□□□□ -0.36
PCAT29-201ENST00000558411 IRX2Q9BZI1 471 aaPredicted RBP12.78□□□□□ -0.36
PCAT29-201ENST00000558411 METP08581 1390 aa12.77□□□□□ -0.36
PCAT29-201ENST00000558411 BRD2P25440 801 aaKnown RBP12.77□□□□□ -0.36
PCAT29-201ENST00000558411 AMPHP49418 695 aa12.77□□□□□ -0.36
PCAT29-201ENST00000558411 SETQ01105 290 aaPredicted RBP12.77□□□□□ -0.36
PCAT29-201ENST00000558411 NR1I3Q14994 352 aa12.77□□□□□ -0.36
PCAT29-201ENST00000558411 CCDC148Q8NFR7 591 aa12.77□□□□□ -0.36
PCAT29-201ENST00000558411 LZTFL1Q9NQ48 299 aa12.77□□□□□ -0.36
PCAT29-201ENST00000558411 HOOK1Q9UJC3 728 aaKnown RBP12.77□□□□□ -0.36
PCAT29-201ENST00000558411 HPCAL4Q9UM19 191 aa12.77□□□□□ -0.36
PCAT29-201ENST00000558411 SUFUQ9UMX1 484 aa12.77□□□□□ -0.36
PCAT29-201ENST00000558411 FAM169AQ9Y6X4 670 aa12.77□□□□□ -0.36
PCAT29-201ENST00000558411 KDM6AO15550 1401 aaPredicted RBP12.77□□□□□ -0.36
PCAT29-201ENST00000558411 POLR3DP05423 398 aaPredicted RBP12.77□□□□□ -0.37
PCAT29-201ENST00000558411 FECHP22830 423 aa12.77□□□□□ -0.37
PCAT29-201ENST00000558411 DDR1Q08345 913 aa12.77□□□□□ -0.37
PCAT29-201ENST00000558411 PNOCQ13519 176 aa12.77□□□□□ -0.37
PCAT29-201ENST00000558411 RESP18Q5W5W9 173 aa12.77□□□□□ -0.37
PCAT29-201ENST00000558411 KSR2Q6VAB6 950 aa12.77□□□□□ -0.37
PCAT29-201ENST00000558411 TXNDC2Q86VQ3 553 aa12.77□□□□□ -0.37
PCAT29-201ENST00000558411 NUTM2AQ8IVF1 878 aaPredicted RBP12.77□□□□□ -0.37
PCAT29-201ENST00000558411 MLKLQ8NB16 471 aa12.77□□□□□ -0.37
PCAT29-201ENST00000558411 TARSL2A2RTX5 802 aaKnown RBP12.76□□□□□ -0.37
PCAT29-201ENST00000558411 SOWAHDA6NJG2 315 aa12.76□□□□□ -0.37
PCAT29-201ENST00000558411 GRM8O00222 908 aa12.76□□□□□ -0.37
PCAT29-201ENST00000558411 C21orf2O43822 256 aa12.76□□□□□ -0.37
PCAT29-201ENST00000558411 MYCNP04198 464 aaPredicted RBP12.76□□□□□ -0.37
PCAT29-201ENST00000558411 MTF1Q14872 753 aa12.76□□□□□ -0.37
PCAT29-201ENST00000558411 CCDC102BQ68D86 513 aa12.76□□□□□ -0.37
PCAT29-201ENST00000558411 TTLL5Q6EMB2 1281 aa12.76□□□□□ -0.37
PCAT29-201ENST00000558411 KCNV1Q6PIU1 500 aa12.76□□□□□ -0.37
PCAT29-201ENST00000558411 RAD9BQ6WBX8 426 aa12.76□□□□□ -0.37
PCAT29-201ENST00000558411 GBP6Q6ZN66 633 aa12.76□□□□□ -0.37
PCAT29-201ENST00000558411 METTL16Q86W50 562 aaKnown RBP12.76□□□□□ -0.37
PCAT29-201ENST00000558411 IGSF22Q8N9C0 903 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms