RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 ARHGEF1Q92888 912 aaKnown RBP6.31□□□□□ -1.4
GABPB1-207ENST00000558335 ZNF512BQ96KM6 892 aaPredicted RBP6.31□□□□□ -1.4
GABPB1-207ENST00000558335 CALR3Q96L12 384 aaKnown RBP6.31□□□□□ -1.4
GABPB1-207ENST00000558335 AK7Q96M32 723 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 PYM1Q9BRP8 204 aaKnown RBP6.31□□□□□ -1.4
GABPB1-207ENST00000558335 UBA5Q9GZZ9 404 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 TTC12Q9H892 705 aaPredicted RBP6.31□□□□□ -1.4
GABPB1-207ENST00000558335 ARGLU1Q9NWB6 273 aaPredicted RBP6.31□□□□□ -1.4
GABPB1-207ENST00000558335 NLRP2Q9NX02 1062 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 DBNLQ9UJU6 430 aaKnown RBP6.31□□□□□ -1.4
GABPB1-207ENST00000558335 CEP131Q9UPN4 1083 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 PA2G4Q9UQ80 394 aaKnown RBP6.31□□□□□ -1.4
GABPB1-207ENST00000558335 LAMA4Q16363 1823 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 RGPD5Q99666 1765 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 NUP188Q5SRE5 1749 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 ZMYM6O95789 1325 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 PTPDC1A2A3K4 754 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 TMCO5BA8MYB1 307 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 ZSCAN12O43309 604 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 KCNQ3O43525 872 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 PPP6R2O75170 966 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 LARGE1O95461 756 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 BMP15O95972 392 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 UQCRFS1P1P0C7P4 283 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 TNNT1P13805 278 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 MYL6BP14649 208 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 RFX5P48382 616 aaPredicted RBP6.3□□□□□ -1.4
GABPB1-207ENST00000558335 PIP4K2AP48426 406 aaPredicted RBP6.3□□□□□ -1.4
GABPB1-207ENST00000558335 EXOSC10Q01780 885 aaKnown RBP6.3□□□□□ -1.4
GABPB1-207ENST00000558335 TMED1Q13445 227 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 BIRC2Q13490 618 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 TUBB2AQ13885 445 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 MCM6Q14566 821 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 SAFBQ15424 915 aaKnown RBP eCLIP6.3□□□□□ -1.4
GABPB1-207ENST00000558335 FILIP1LQ4L180 1135 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 TTC39AQ5SRH9 613 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 CEP135Q66GS9 1140 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 TTLL5Q6EMB2 1281 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 KLHL10Q6JEL2 608 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 LMOD2Q6P5Q4 547 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 OLFM4Q6UX06 510 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 KIF6Q6ZMV9 814 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 CCDC186Q7Z3E2 898 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 UBE3BQ7Z3V4 1068 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 LRRC8AQ8IWT6 810 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 NFATC2IPQ8NCF5 419 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 NSUN7Q8NE18 718 aaKnown RBP6.3□□□□□ -1.4
GABPB1-207ENST00000558335 LRRC59Q96AG4 307 aaKnown RBP6.3□□□□□ -1.4
GABPB1-207ENST00000558335 DDX11Q96FC9 970 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 ERO1AQ96HE7 468 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 KAZALD1Q96I82 304 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 C8orf76Q96K31 380 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 TMEM87BQ96K49 555 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 SH3GL3Q99963 347 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 TUBB2BQ9BVA1 445 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 UTP14AQ9BVJ6 771 aaKnown RBP6.3□□□□□ -1.4
GABPB1-207ENST00000558335 PLA2G12BQ9BX93 195 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 OSBPL5Q9H0X9 879 aaPredicted RBP6.3□□□□□ -1.4
GABPB1-207ENST00000558335 SIL1Q9H173 461 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 IL25Q9H293 177 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 CNNM2Q9H8M5 875 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 FAM53CQ9NYF3 392 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 IQSEC3Q9UPP2 1182 aaPredicted RBP6.3□□□□□ -1.4
GABPB1-207ENST00000558335 FARP1Q9Y4F1 1045 aaPredicted RBP6.3□□□□□ -1.4
GABPB1-207ENST00000558335 COL18A1P39060 1754 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 ZNF609O15014 1411 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 TNS3Q68CZ2 1445 aa6.3□□□□□ -1.4
GABPB1-207ENST00000558335 PAPPAQ13219 1627 aa6.29□□□□□ -1.4
GABPB1-207ENST00000558335 E7EWF7 191 aa6.29□□□□□ -1.4
GABPB1-207ENST00000558335 ZNF213O14771 459 aa6.29□□□□□ -1.4
GABPB1-207ENST00000558335 KDM6AO15550 1401 aaPredicted RBP6.29□□□□□ -1.4
GABPB1-207ENST00000558335 ATP8B1O43520 1251 aa6.29□□□□□ -1.4
GABPB1-207ENST00000558335 NR1I2O75469 434 aa6.29□□□□□ -1.4
GABPB1-207ENST00000558335 ATRNO75882 1429 aa6.29□□□□□ -1.4
GABPB1-207ENST00000558335 TUBBP07437 444 aa6.29□□□□□ -1.4
GABPB1-207ENST00000558335 SLC3A2P08195 630 aaKnown RBP6.29□□□□□ -1.4
GABPB1-207ENST00000558335 CYP21A2P08686 494 aa6.29□□□□□ -1.4
GABPB1-207ENST00000558335 HSPD1P10809 573 aaKnown RBP6.29□□□□□ -1.4
GABPB1-207ENST00000558335 XBP1P17861 261 aa6.29□□□□□ -1.4
GABPB1-207ENST00000558335 GNAT2P19087 354 aa6.29□□□□□ -1.4
GABPB1-207ENST00000558335 PTGS1P23219 599 aa6.29□□□□□ -1.4
GABPB1-207ENST00000558335 SFPQP23246 707 aaKnown RBP eCLIP6.29□□□□□ -1.4
GABPB1-207ENST00000558335 CMA1P23946 247 aa6.29□□□□□ -1.4
GABPB1-207ENST00000558335 HNRNPH2P55795 449 aaKnown RBP6.29□□□□□ -1.4
GABPB1-207ENST00000558335 RWDD2BP57060 319 aa6.29□□□□□ -1.4
GABPB1-207ENST00000558335 ICA1Q05084 483 aa6.29□□□□□ -1.4
GABPB1-207ENST00000558335 ADCY2Q08462 1091 aa6.29□□□□□ -1.4
GABPB1-207ENST00000558335 GNL2Q13823 731 aaKnown RBP6.29□□□□□ -1.4
GABPB1-207ENST00000558335 BMS1Q14692 1282 aaKnown RBP6.29□□□□□ -1.4
GABPB1-207ENST00000558335 SART3Q15020 963 aaKnown RBP6.29□□□□□ -1.4
GABPB1-207ENST00000558335 NKX1-1Q15270 411 aaPredicted RBP6.29□□□□□ -1.4
GABPB1-207ENST00000558335 PROSER3Q2NL68 480 aa6.29□□□□□ -1.4
GABPB1-207ENST00000558335 AP1ARQ63HQ0 302 aa6.29□□□□□ -1.4
GABPB1-207ENST00000558335 LMBR1LQ6UX01 489 aa6.29□□□□□ -1.4
GABPB1-207ENST00000558335 FERMT3Q86UX7 667 aa6.29□□□□□ -1.4
GABPB1-207ENST00000558335 FSIP1Q8NA03 581 aa6.29□□□□□ -1.4
GABPB1-207ENST00000558335 SPC24Q8NBT2 197 aa6.29□□□□□ -1.4
GABPB1-207ENST00000558335 APPBP2Q92624 585 aa6.29□□□□□ -1.4
GABPB1-207ENST00000558335 CCDC97Q96F63 343 aaPredicted RBP6.29□□□□□ -1.4
GABPB1-207ENST00000558335 NEUROD6Q96NK8 337 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms