RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 ZMYM6O95789 1325 aa20.14■□□□□ 0.81
SNX1-203ENST00000558040 RPS12P25398 132 aaKnown RBP20.14■□□□□ 0.81
SNX1-203ENST00000558040 MMP14P50281 582 aa20.14■□□□□ 0.81
SNX1-203ENST00000558040 SCNN1DP51172 638 aa20.14■□□□□ 0.81
SNX1-203ENST00000558040 ANAPC15P60006 121 aa20.14■□□□□ 0.81
SNX1-203ENST00000558040 DYNLL1P63167 89 aaKnown RBP20.14■□□□□ 0.81
SNX1-203ENST00000558040 OGFOD1Q8N543 542 aa20.14■□□□□ 0.81
SNX1-203ENST00000558040 DDRGK1Q96HY6 314 aa20.14■□□□□ 0.81
SNX1-203ENST00000558040 DAGLAQ9Y4D2 1042 aa20.14■□□□□ 0.81
SNX1-203ENST00000558040 ZKSCAN1P17029 563 aaPredicted RBP20.13■□□□□ 0.81
SNX1-203ENST00000558040 CRKP46108 304 aa20.13■□□□□ 0.81
SNX1-203ENST00000558040 NECTIN1Q15223 517 aa20.13■□□□□ 0.81
SNX1-203ENST00000558040 ALX1Q15699 326 aa20.13■□□□□ 0.81
SNX1-203ENST00000558040 GMLQ99445 158 aa20.13■□□□□ 0.81
SNX1-203ENST00000558040 RBM19Q9Y4C8 960 aaKnown RBP20.13■□□□□ 0.81
SNX1-203ENST00000558040 SBF1O95248 1867 aa20.12■□□□□ 0.81
SNX1-203ENST00000558040 CREB3L3Q68CJ9 461 aa20.12■□□□□ 0.81
SNX1-203ENST00000558040 GIMAP6Q6P9H5 292 aa20.12■□□□□ 0.81
SNX1-203ENST00000558040 ZDHHC15Q96MV8 337 aa20.12■□□□□ 0.81
SNX1-203ENST00000558040 NAPBQ9H115 298 aa20.12■□□□□ 0.81
SNX1-203ENST00000558040 RNF181Q9P0P0 153 aa20.12■□□□□ 0.81
SNX1-203ENST00000558040 GSG1L2A8MUP6 293 aa20.11■□□□□ 0.81
SNX1-203ENST00000558040 FOXP2O15409 715 aa20.11■□□□□ 0.81
SNX1-203ENST00000558040 USP17L8P0C7I0 530 aa20.11■□□□□ 0.81
SNX1-203ENST00000558040 TDO2P48775 406 aa20.11■□□□□ 0.81
SNX1-203ENST00000558040 RBM5P52756 815 aaKnown RBP eCLIP20.11■□□□□ 0.81
SNX1-203ENST00000558040 IMMTQ16891 758 aaKnown RBP20.11■□□□□ 0.81
SNX1-203ENST00000558040 IFNL3Q8IZI9 196 aa20.11■□□□□ 0.81
SNX1-203ENST00000558040 ATP8A2Q9NTI2 1148 aa20.11■□□□□ 0.81
SNX1-203ENST00000558040 ZBTB12Q9Y330 459 aaPredicted RBP20.11■□□□□ 0.81
SNX1-203ENST00000558040 SLC27A2O14975 620 aa20.1■□□□□ 0.81
SNX1-203ENST00000558040 PRKAB2O43741 272 aa20.1■□□□□ 0.81
SNX1-203ENST00000558040 FGAP02671 866 aa20.1■□□□□ 0.81
SNX1-203ENST00000558040 SH3RF3Q8TEJ3 882 aaPredicted RBP20.1■□□□□ 0.81
SNX1-203ENST00000558040 KCNB2Q92953 911 aa20.1■□□□□ 0.81
SNX1-203ENST00000558040 ANP32AP39687 249 aaKnown RBP20.09■□□□□ 0.81
SNX1-203ENST00000558040 USP5P45974 858 aa20.09■□□□□ 0.81
SNX1-203ENST00000558040 KRT32Q14532 448 aa20.09■□□□□ 0.81
SNX1-203ENST00000558040 C9orf131Q5VYM1 1079 aa20.09■□□□□ 0.81
SNX1-203ENST00000558040 TEX11Q8IYF3 940 aa20.09■□□□□ 0.81
SNX1-203ENST00000558040 SDR42E1Q8WUS8 393 aa20.09■□□□□ 0.81
SNX1-203ENST00000558040 DPF2Q92785 391 aa20.09■□□□□ 0.81
SNX1-203ENST00000558040 IL17RAQ96F46 866 aa20.09■□□□□ 0.81
SNX1-203ENST00000558040 EPB41L4AQ9HCS5 686 aaPredicted RBP20.09■□□□□ 0.81
SNX1-203ENST00000558040 GJA3Q9Y6H8 435 aa20.09■□□□□ 0.81
SNX1-203ENST00000558040 TIAM2Q8IVF5 1701 aa20.09■□□□□ 0.81
SNX1-203ENST00000558040 ZNF541Q9H0D2 1346 aa20.08■□□□□ 0.81
SNX1-203ENST00000558040 CFAP100Q494V2 611 aa20.08■□□□□ 0.81
SNX1-203ENST00000558040 GPC2Q8N158 579 aa20.08■□□□□ 0.81
SNX1-203ENST00000558040 PALD1Q9ULE6 856 aa20.08■□□□□ 0.81
SNX1-203ENST00000558040 SNX14Q9Y5W7 946 aa20.08■□□□□ 0.81
SNX1-203ENST00000558040 ZNF213O14771 459 aa20.07■□□□□ 0.8
SNX1-203ENST00000558040 RHBDL3P58872 404 aa20.07■□□□□ 0.8
SNX1-203ENST00000558040 RABEP1Q15276 862 aa20.07■□□□□ 0.8
SNX1-203ENST00000558040 DLGAP5Q15398 846 aa20.07■□□□□ 0.8
SNX1-203ENST00000558040 TSGA10IPQ3SY00 556 aa20.07■□□□□ 0.8
SNX1-203ENST00000558040 APOBEC3HQ6NTF7 200 aaKnown RBP20.07■□□□□ 0.8
SNX1-203ENST00000558040 IL27Q8NEV9 243 aa20.07■□□□□ 0.8
SNX1-203ENST00000558040 DCP1AQ9NPI6 582 aaPredicted RBP20.07■□□□□ 0.8
SNX1-203ENST00000558040 USP40Q9NVE5 1235 aa20.07■□□□□ 0.8
SNX1-203ENST00000558040 ZC3H4Q9UPT8 1303 aaKnown RBP20.06■□□□□ 0.8
SNX1-203ENST00000558040 ADAMTSL1Q8N6G6 1762 aa20.06■□□□□ 0.8
SNX1-203ENST00000558040 CYP21A2P08686 494 aa20.06■□□□□ 0.8
SNX1-203ENST00000558040 GMPSP49915 693 aaPredicted RBP20.06■□□□□ 0.8
SNX1-203ENST00000558040 AMOTL1Q8IY63 956 aa20.06■□□□□ 0.8
SNX1-203ENST00000558040 RASEFQ8IZ41 740 aa20.06■□□□□ 0.8
SNX1-203ENST00000558040 MTMR14Q8NCE2 650 aa20.06■□□□□ 0.8
SNX1-203ENST00000558040 TGFBRAP1Q8WUH2 860 aa20.06■□□□□ 0.8
SNX1-203ENST00000558040 ARPP21Q9UBL0 812 aaPredicted RBP20.06■□□□□ 0.8
SNX1-203ENST00000558040 PSMA5P28066 241 aa20.05■□□□□ 0.8
SNX1-203ENST00000558040 ZNF280AP59817 542 aaPredicted RBP20.05■□□□□ 0.8
SNX1-203ENST00000558040 CDC42EP5Q6NZY7 148 aa20.05■□□□□ 0.8
SNX1-203ENST00000558040 KIF2CQ99661 725 aa20.05■□□□□ 0.8
SNX1-203ENST00000558040 LAMA4Q16363 1823 aa20.04■□□□□ 0.8
SNX1-203ENST00000558040 DCAF8L1A6NGE4 600 aa20.04■□□□□ 0.8
SNX1-203ENST00000558040 SPDYE2BA6NHP3 402 aa20.04■□□□□ 0.8
SNX1-203ENST00000558040 SPDYE6P0CI01 402 aa20.04■□□□□ 0.8
SNX1-203ENST00000558040 TM6SF1Q9BZW5 370 aa20.04■□□□□ 0.8
SNX1-203ENST00000558040 TMOD2Q9NZR1 351 aa20.04■□□□□ 0.8
SNX1-203ENST00000558040 NAV1Q8NEY1 1877 aa20.03■□□□□ 0.8
SNX1-203ENST00000558040 MYO1BO43795 1136 aa20.03■□□□□ 0.8
SNX1-203ENST00000558040 HAND2P61296 217 aa20.03■□□□□ 0.8
SNX1-203ENST00000558040 SBK1Q52WX2 424 aa20.03■□□□□ 0.8
SNX1-203ENST00000558040 MAPKAPK5Q8IW41 473 aa20.03■□□□□ 0.8
SNX1-203ENST00000558040 MICALL2Q8IY33 904 aa20.03■□□□□ 0.8
SNX1-203ENST00000558040 JAKMIP1Q96N16 626 aaKnown RBP20.03■□□□□ 0.8
SNX1-203ENST00000558040 MYOZ2Q9NPC6 264 aa20.03■□□□□ 0.8
SNX1-203ENST00000558040 MCM9Q9NXL9 1143 aa20.03■□□□□ 0.8
SNX1-203ENST00000558040 CNOT7Q9UIV1 285 aaKnown RBP20.03■□□□□ 0.8
SNX1-203ENST00000558040 FLT1P17948 1338 aa20.02■□□□□ 0.8
SNX1-203ENST00000558040 FOCADQ5VW36 1801 aa20.02■□□□□ 0.8
SNX1-203ENST00000558040 H7C1D1 291 aa20.02■□□□□ 0.8
SNX1-203ENST00000558040 SLC3A2P08195 630 aaKnown RBP20.02■□□□□ 0.8
SNX1-203ENST00000558040 PPARAQ07869 468 aa20.02■□□□□ 0.8
SNX1-203ENST00000558040 DPY19L2Q6NUT2 758 aa20.02■□□□□ 0.8
SNX1-203ENST00000558040 CTR9Q6PD62 1173 aa20.02■□□□□ 0.8
SNX1-203ENST00000558040 MKRN1Q9UHC7 482 aaKnown RBP20.02■□□□□ 0.8
SNX1-203ENST00000558040 ANAPC4Q9UJX5 808 aa20.02■□□□□ 0.8
SNX1-203ENST00000558040 ECM29Q5VYK3 1845 aa20.02■□□□□ 0.79
SNX1-203ENST00000558040 CDK5RAP2Q96SN8 1893 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms